BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00009179
         (1207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   369   e-100
ref|XP_003516775.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   360   5e-97
ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [...   335   1e-89
ref|XP_002313876.1| predicted protein [Populus trichocarpa] gi|2...   335   1e-89
ref|XP_003635999.1| RNA pseudourine synthase [Medicago truncatul...   330   6e-88

>ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial [Vitis vinifera]
            gi|296090438|emb|CBI40257.3| unnamed protein product
            [Vitis vinifera]
          Length = 476

 Score =  369 bits (948), Expect = e-100
 Identities = 190/276 (68%), Positives = 219/276 (79%), Gaps = 3/276 (1%)
 Frame = +2

Query: 2    PGMPVQGGVGIKRSLDELAAKYLRYGYKESPRLVHRLDRDSSGILVMGRTHLSTTVLHSI 181
            PG+PVQGG+GIKRSLDELAA YLRY   E PRLVHRLDRDSSGIL+MGRT  S T+LHSI
Sbjct: 200  PGLPVQGGIGIKRSLDELAATYLRYDCSEPPRLVHRLDRDSSGILIMGRTQTSATILHSI 259

Query: 182  FREKTLGASN-DLLGCKRILKKRYWALVIGCPRRQQGSISVPLVKVVVDNGKSERITVAD 358
            FREKT GASN D+   KRIL++RYWALVIG PRR +G IS PL KVVVD+GKSERIT+ D
Sbjct: 260  FREKTFGASNNDIDTKKRILQRRYWALVIGSPRRPRGLISAPLGKVVVDDGKSERITIVD 319

Query: 359  NSCRSSGQHAMTEYRVIASSSRGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ 538
            N    S QHA+TEYRVI SS  GYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ
Sbjct: 320  NVQTMSSQHAITEYRVIKSSCHGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ 379

Query: 539  AHRKLGHRIHSSDLISGDE-MSKVNQESIGLELESGSISDKQFSLHLHCKEMVLPNISMA 715
            AHRK      S+   + DE +S       GL+LESGSI DKQ  LHLHCK+MVLPN+S+A
Sbjct: 380  AHRKWKQLFQSNIEKNLDENLSNRKTHPFGLDLESGSILDKQPHLHLHCKQMVLPNVSLA 439

Query: 716  LQDGSIT-DIDAARMKKIVLVAPLPAHMQRSWDLLS 820
            LQ+  ++ + D + ++ +  VAPLP+HMQRSWD+L+
Sbjct: 440  LQNLQLSAECDLSELESLEFVAPLPSHMQRSWDILN 475


>ref|XP_003516775.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Glycine
           max]
          Length = 427

 Score =  360 bits (923), Expect = 5e-97
 Identities = 182/272 (66%), Positives = 214/272 (78%), Gaps = 1/272 (0%)
 Frame = +2

Query: 2   PGMPVQGGVGIKRSLDELAAKYLRYGYKESPRLVHRLDRDSSGILVMGRTHLSTTVLHSI 181
           PGMPVQGG+ IKRSLD +AA  L YGY + PRLVHRLDRD SGILVMGRTH STTVLHSI
Sbjct: 153 PGMPVQGGINIKRSLDAVAAASLNYGYSQPPRLVHRLDRDCSGILVMGRTHTSTTVLHSI 212

Query: 182 FREKTLGASNDLLGCKRILKKRYWALVIGCPRRQQGSISVPLVKVVVDNGKSERITVADN 361
           FREKT  AS+D+   KRIL++RYWALV+GCPRR +G ++  L KVVVDNG+S+RIT+ DN
Sbjct: 213 FREKTSRASDDIGKEKRILQRRYWALVLGCPRRPKGLVTASLGKVVVDNGRSDRITIVDN 272

Query: 362 SCRSSGQHAMTEYRVIASSSRGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQA 541
           S   S QHA+TEYRVIASSS+GYTWLEL+PLTGRKHQLRVHCAEVLGTPIVGDYKYGWQA
Sbjct: 273 STLMSSQHAITEYRVIASSSQGYTWLELTPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQA 332

Query: 542 HRKLGHRIHSSDLISGDEMSKVNQESIGLELESGSISDKQFSLHLHCKEMVLPNISMALQ 721
           HRK GH    +   S +E+    +   GL L  GSIS+    LHLHCK+MVLPNIS ALQ
Sbjct: 333 HRKWGHFDLPNVEDSREELLNEEKLPFGLNLNKGSISENHPRLHLHCKQMVLPNISQALQ 392

Query: 722 D-GSITDIDAARMKKIVLVAPLPAHMQRSWDL 814
           +  S +  D + ++++ LVA LP +MQRSWD+
Sbjct: 393 NVQSASSCDLSLVEELELVADLPPYMQRSWDV 424


>ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223542055|gb|EEF43599.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 536

 Score =  335 bits (860), Expect = 1e-89
 Identities = 176/276 (63%), Positives = 212/276 (76%), Gaps = 3/276 (1%)
 Frame = +2

Query: 2    PGMPVQGGVGIKRSLDELAAKYLRYGYKESPRLVHRLDRDSSGILVMGRTHLSTTVLHSI 181
            PGMPVQGG+GIK S DELAA  L Y Y E PRLVHRLDRDSSGILVMGRT  ST VLHS+
Sbjct: 261  PGMPVQGGIGIKSSFDELAASCLSYDYSEPPRLVHRLDRDSSGILVMGRTQTSTMVLHSV 320

Query: 182  FREKTLGASNDLLG-CKRILKKRYWALVIGCPRRQQGSISVPLVKVVVDNGKSERITVAD 358
            FREKT  ASN  +G  +RIL+++YWALVIG PRRQ+G IS PL KVVVD+GKS+RITV +
Sbjct: 321  FREKTFAASNHDIGERRRILQRKYWALVIGSPRRQKGIISAPLGKVVVDDGKSDRITVVE 380

Query: 359  NSCRSSGQHAMTEYRVIASSSRGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ 538
            N+  +S QHA+T+YRV+  SS GY WLELSP+TGRKHQLRVHCAEVLGTPIVGDYKYGWQ
Sbjct: 381  NAESTSFQHAVTQYRVM-ESSHGYAWLELSPITGRKHQLRVHCAEVLGTPIVGDYKYGWQ 439

Query: 539  AHRKLGH-RIHSSDLISGDEMSKVNQESIGLELESGSISDKQFSLHLHCKEMVLPNISMA 715
             HRK       + + IS +          G++LESGSIS+K   LHLHCK+MVLP++S A
Sbjct: 440  VHRKWKQLPFPNLEKISNENALCKKILPFGIDLESGSISEKHPRLHLHCKQMVLPDVSQA 499

Query: 716  LQD-GSITDIDAARMKKIVLVAPLPAHMQRSWDLLS 820
            L+   + ++ D + +K I L APLP++MQRSWD+L+
Sbjct: 500  LRGVQTSSNYDFSDLKSIELDAPLPSYMQRSWDILN 535


>ref|XP_002313876.1| predicted protein [Populus trichocarpa] gi|222850284|gb|EEE87831.1|
           predicted protein [Populus trichocarpa]
          Length = 324

 Score =  335 bits (859), Expect = 1e-89
 Identities = 179/277 (64%), Positives = 210/277 (75%), Gaps = 5/277 (1%)
 Frame = +2

Query: 2   PGMPVQGGVGIKRSLDELAAKYLRYGYKESPRLVHRLDRDSSGILVMGRTHLSTTVLHSI 181
           PGMPVQGG+GIKRSLDEL+A      Y E PRLVHRLDRD SGILVMGRT  S TVLH+I
Sbjct: 51  PGMPVQGGIGIKRSLDELSASCFSSDYSEPPRLVHRLDRDCSGILVMGRTQTSATVLHAI 110

Query: 182 FREKTLGASNDLLGCK-RILKKRYWALVIGCPRRQQGSISVPLVKVVVDNGKSERITVAD 358
           FREKTL ASND +G K RIL+++YWALVIG PRR +G IS PL KVVVDNGKS+RITV +
Sbjct: 111 FREKTLAASNDDVGNKRRILQRKYWALVIGSPRRPKGLISAPLGKVVVDNGKSDRITVVE 170

Query: 359 NSCRSSGQHAMTEYRVIASSSRGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ 538
           NS   S QHA+T+YRVI  SS G+TWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKY WQ
Sbjct: 171 NSQNLSSQHAVTQYRVI-ESSHGFTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYAWQ 229

Query: 539 AHRKLGHRIHSSDLISGDEMSKVNQESI---GLELESGSISDKQFSLHLHCKEMVLPNIS 709
           AHR       S+  I  +   K   E I    L+L+SGSIS+K   LHLHCK+MVLP++S
Sbjct: 230 AHRNWKQLQWSN--IEDNSNDKSLSEKILPFALDLDSGSISEKHPRLHLHCKQMVLPDVS 287

Query: 710 MALQDGSI-TDIDAARMKKIVLVAPLPAHMQRSWDLL 817
            ALQD  + +D D +++  +   APLP +M++SWD+L
Sbjct: 288 KALQDVQLSSDYDFSQLASLKFDAPLPPYMKKSWDIL 324


>ref|XP_003635999.1| RNA pseudourine synthase [Medicago truncatula]
           gi|355501934|gb|AES83137.1| RNA pseudourine synthase
           [Medicago truncatula]
          Length = 430

 Score =  330 bits (845), Expect = 6e-88
 Identities = 173/275 (62%), Positives = 208/275 (75%), Gaps = 4/275 (1%)
 Frame = +2

Query: 2   PGMPVQGGVGIKRSLDELAAKYLRYGYKESPRLVHRLDRDSSGILVMGRTHLSTTVLHSI 181
           PGMPVQGG+ IK SLD +AA+ L Y Y + PRLVHRLDRD SGILVMGRT  ST +LHSI
Sbjct: 153 PGMPVQGGINIKLSLDAVAAQSLNYDYSQPPRLVHRLDRDCSGILVMGRTKTSTALLHSI 212

Query: 182 FREKTLGASNDLLGCKRI-LKKRYWALVIGCPRRQQGSISVPLVKVVVDNGKSERITVAD 358
           FREKT  ASN+    ++I L++RYWALV+GCPRR  G ++ PL KVVVDNGKS+RIT+ D
Sbjct: 213 FREKTSRASNEENDTEKIILQRRYWALVLGCPRRSGGVVNAPLGKVVVDNGKSDRITIVD 272

Query: 359 NSCRSSGQHAMTEYRVIASSSRGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQ 538
           NS   S QHA+TEYRVI+SSS G+TWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYG Q
Sbjct: 273 NSALLSSQHAVTEYRVISSSSHGFTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGRQ 332

Query: 539 AHRKLGHRIHSSDLISGDEMSKVNQESIGLELESGSISDKQFSLHLHCKEMVLPNISMAL 718
           AH+K G    S+   S +E  K      GL L  GSISDK   LHLHCK++VLPNIS AL
Sbjct: 333 AHKKWGQFDFSNLEDSTEEHLKEEALPFGLNLNKGSISDKHPRLHLHCKQIVLPNISQAL 392

Query: 719 QD-GSITD--IDAARMKKIVLVAPLPAHMQRSWDL 814
           Q+  S++D   D + ++ + L A LP +M++SW++
Sbjct: 393 QNVQSVSDSSYDLSAVESLELEADLPPYMKKSWEV 427