BLASTX nr result

ID: Scutellaria24_contig00009133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00009133
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [...   229   2e-58
emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]   229   2e-58
ref|XP_002319467.1| global transcription factor group [Populus t...   224   7e-57
ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinu...   221   4e-56
ref|XP_004158653.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex...   217   9e-55

>ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1071

 Score =  229 bits (584), Expect = 2e-58
 Identities = 118/158 (74%), Positives = 129/158 (81%), Gaps = 1/158 (0%)
 Frame = +1

Query: 1   VKSMPNVAETFPSKANLRSVNHEVSKEELRRQHQAALARQKNEETARRLVGVGS-EGANH 177
           VK   N  E   SKA LRS N E+SKEELRRQHQA LARQKNEETARRL G GS  G N 
Sbjct: 471 VKPEANGGEAVSSKATLRSDNQEMSKEELRRQHQAELARQKNEETARRLAGGGSGAGDNR 530

Query: 178 GPVKPSGELIAYKNVNDLPPPRDFMIQVDQRNEAILLPIYGRMVPFHIATVKSVSSQQDT 357
           G VK +G+LIAYKNVNDLPPP++ MIQVDQ+NEAILLPIYG MVPFH+ATVKSVSSQQDT
Sbjct: 531 GAVKATGDLIAYKNVNDLPPPKELMIQVDQKNEAILLPIYGSMVPFHVATVKSVSSQQDT 590

Query: 358 SRTCYIRIIFNVPGAPFAQNDPNLQKFHDSIYVKEVSF 471
           +RTCYIRIIFNVPG PF+ +D N  KF  SIY+KEVSF
Sbjct: 591 NRTCYIRIIFNVPGTPFSPHDSNSMKFQGSIYLKEVSF 628


>emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]
          Length = 1019

 Score =  229 bits (584), Expect = 2e-58
 Identities = 118/158 (74%), Positives = 129/158 (81%), Gaps = 1/158 (0%)
 Frame = +1

Query: 1   VKSMPNVAETFPSKANLRSVNHEVSKEELRRQHQAALARQKNEETARRLVGVGS-EGANH 177
           VK   N  E   SKA LRS N E+SKEELRRQHQA LARQKNEETARRL G GS  G N 
Sbjct: 471 VKPEANGGEAVSSKATLRSDNQEMSKEELRRQHQAELARQKNEETARRLAGGGSGAGDNR 530

Query: 178 GPVKPSGELIAYKNVNDLPPPRDFMIQVDQRNEAILLPIYGRMVPFHIATVKSVSSQQDT 357
           G VK +G+LIAYKNVNDLPPP++ MIQVDQ+NEAILLPIYG MVPFH+ATVKSVSSQQDT
Sbjct: 531 GAVKATGDLIAYKNVNDLPPPKELMIQVDQKNEAILLPIYGSMVPFHVATVKSVSSQQDT 590

Query: 358 SRTCYIRIIFNVPGAPFAQNDPNLQKFHDSIYVKEVSF 471
           +RTCYIRIIFNVPG PF+ +D N  KF  SIY+KEVSF
Sbjct: 591 NRTCYIRIIFNVPGTPFSPHDSNSMKFQGSIYLKEVSF 628


>ref|XP_002319467.1| global transcription factor group [Populus trichocarpa]
           gi|222857843|gb|EEE95390.1| global transcription factor
           group [Populus trichocarpa]
          Length = 1053

 Score =  224 bits (570), Expect = 7e-57
 Identities = 116/158 (73%), Positives = 127/158 (80%), Gaps = 1/158 (0%)
 Frame = +1

Query: 1   VKSMPNVAETFPSKANLRSVNHEVSKEELRRQHQAALARQKNEETARRLVGVGSEGA-NH 177
           VK     +ET  SKA LRS NHE+SK+ELRRQHQA LARQKNEETARRL G GS    N 
Sbjct: 471 VKPERRGSETTLSKATLRSDNHEMSKKELRRQHQAELARQKNEETARRLAGGGSAATDNR 530

Query: 178 GPVKPSGELIAYKNVNDLPPPRDFMIQVDQRNEAILLPIYGRMVPFHIATVKSVSSQQDT 357
           G  K  G+LIAYKNVNDLPPPRDFMIQ+DQRNEAI+LPI+G MVPFH+ATVKSVSSQQD 
Sbjct: 531 GGAKTIGDLIAYKNVNDLPPPRDFMIQIDQRNEAIILPIHGSMVPFHVATVKSVSSQQDN 590

Query: 358 SRTCYIRIIFNVPGAPFAQNDPNLQKFHDSIYVKEVSF 471
           +RTCYIRIIFNVPG PF  +D N  KF  SIY+KEVSF
Sbjct: 591 NRTCYIRIIFNVPGTPFNPHDANSLKFQGSIYLKEVSF 628


>ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinus communis]
           gi|223548526|gb|EEF50017.1| FACT complex subunit SPT16,
           putative [Ricinus communis]
          Length = 1098

 Score =  221 bits (564), Expect = 4e-56
 Identities = 111/146 (76%), Positives = 124/146 (84%), Gaps = 1/146 (0%)
 Frame = +1

Query: 37  SKANLRSVNHEVSKEELRRQHQAALARQKNEETARRLVGVGSEGA-NHGPVKPSGELIAY 213
           SKA LRS NHE+SKEELRRQHQA LARQKNEETARRL G GS  + N G VK  G+LIAY
Sbjct: 480 SKATLRSDNHEMSKEELRRQHQAELARQKNEETARRLAGGGSSASDNRGSVKMIGDLIAY 539

Query: 214 KNVNDLPPPRDFMIQVDQRNEAILLPIYGRMVPFHIATVKSVSSQQDTSRTCYIRIIFNV 393
           KNVNDLPPPRD MIQVDQ+NEAIL+PI+G MVPFH+ATVKSVSSQQD++RTCYIRI FNV
Sbjct: 540 KNVNDLPPPRDLMIQVDQKNEAILIPIHGSMVPFHVATVKSVSSQQDSNRTCYIRITFNV 599

Query: 394 PGAPFAQNDPNLQKFHDSIYVKEVSF 471
           PG PF+ +D N  KF  SIY+KE+SF
Sbjct: 600 PGTPFSPHDANTLKFQGSIYLKEISF 625


>ref|XP_004158653.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SPT16-like
           [Cucumis sativus]
          Length = 1073

 Score =  217 bits (552), Expect = 9e-55
 Identities = 107/158 (67%), Positives = 126/158 (79%), Gaps = 1/158 (0%)
 Frame = +1

Query: 1   VKSMPNVAETFPSKANLRSVNHEVSKEELRRQHQAALARQKNEETARRLVGVGS-EGANH 177
           VKS  N  E   SK  LRS NHE+SKEELRRQHQA LARQKNEETARRL GVG+  G N 
Sbjct: 477 VKSEANGKEAVVSKTTLRSDNHEISKEELRRQHQAELARQKNEETARRLAGVGNGAGDNR 536

Query: 178 GPVKPSGELIAYKNVNDLPPPRDFMIQVDQRNEAILLPIYGRMVPFHIATVKSVSSQQDT 357
             ++ + +L+AYK+VNDLPP RD MI +DQ+NE +LLPIYG MVPFH+AT+++VSSQQDT
Sbjct: 537 SSMRTAADLVAYKSVNDLPPQRDLMIHIDQKNETVLLPIYGSMVPFHVATIRTVSSQQDT 596

Query: 358 SRTCYIRIIFNVPGAPFAQNDPNLQKFHDSIYVKEVSF 471
           +RTCYIRIIFNVPG PF+ +D N  KF  SIY+KEVSF
Sbjct: 597 NRTCYIRIIFNVPGTPFSPHDANSLKFQGSIYLKEVSF 634


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