BLASTX nr result
ID: Scutellaria24_contig00009014
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria24_contig00009014
(1506 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI24961.3| unnamed protein product [Vitis vinifera] 354 3e-95
ref|XP_002272444.1| PREDICTED: RNA polymerase sigma factor rpoD-... 354 3e-95
ref|NP_196877.1| sigma factor 4 [Arabidopsis thaliana] gi|752165... 298 2e-78
ref|XP_004169825.1| PREDICTED: RNA polymerase sigma factor sigD,... 291 4e-76
ref|XP_004149725.1| PREDICTED: RNA polymerase sigma factor sigD,... 291 4e-76
>emb|CBI24961.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 354 bits (909), Expect = 3e-95
Identities = 178/301 (59%), Positives = 232/301 (77%)
Frame = +1
Query: 433 KSRFMTPKEEATFSWYLKERARIEGVRREVMAEMGGNEVSTKQWAKAAGISLHKLDRILW 612
+S +TP+EEA F LKE A +E RR + AE +E ++ QWA+A GI LD++L
Sbjct: 19 RSAVLTPREEAEFCLCLKEEAGLEAARRRI-AETREHEPTSNQWAEAVGIKRSSLDKMLC 77
Query: 613 NGRESEKKITSCYHGLVVSIASSYQGKGLSIQDLTQEGSIGLLHGAIKFNPERGYKLSTY 792
NGRES ++I Y LVVSIA+ YQGKGLS+QDL QEGSIGLL GA +F+P+RGYKLSTY
Sbjct: 78 NGRESRERINQSYRRLVVSIAARYQGKGLSLQDLIQEGSIGLLRGAERFDPDRGYKLSTY 137
Query: 793 AYWWIRQSITRAIANKSRIIRLPGTISELMPRICEANNALSRKLRRFPTYEEISESINAN 972
YWWIRQ+I RAIANKSRIIRLPG+I E++ +I EA LSR+LRR PTY+EI+E I+ N
Sbjct: 138 VYWWIRQAIVRAIANKSRIIRLPGSICEMVAKIAEARTVLSRRLRRLPTYDEIAEFIDVN 197
Query: 973 ASSVRLAIERNRPVISLDQAMTSRGYISLQHIIPGPDEITPEALVKKELLKPEIGKLFET 1152
S+VRL ER+R IS+DQA+TS+G ++LQ IIPGPDE TP+ +VK++L+K E+ + T
Sbjct: 198 VSTVRLVSERSRTPISVDQAVTSQGCMTLQEIIPGPDETTPQKMVKRQLMKQEVERALNT 257
Query: 1153 LCDREKQILRLHYGLNGESGWSFEEIGRMFKLSRERVRQINFAALSKIRETNQINDLNYF 1332
LC+RE ILRL++G+NGE+ SFEEIGR+ KLSRERVRQIN ALSK+R+T+ ++ L +
Sbjct: 258 LCEREAYILRLYFGINGETPLSFEEIGRLMKLSRERVRQINSIALSKLRQTSVVDYLKLY 317
Query: 1333 L 1335
+
Sbjct: 318 M 318
>ref|XP_002272444.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
Length = 426
Score = 354 bits (909), Expect = 3e-95
Identities = 178/301 (59%), Positives = 232/301 (77%)
Frame = +1
Query: 433 KSRFMTPKEEATFSWYLKERARIEGVRREVMAEMGGNEVSTKQWAKAAGISLHKLDRILW 612
+S +TP+EEA F LKE A +E RR + AE +E ++ QWA+A GI LD++L
Sbjct: 126 RSAVLTPREEAEFCLCLKEEAGLEAARRRI-AETREHEPTSNQWAEAVGIKRSSLDKMLC 184
Query: 613 NGRESEKKITSCYHGLVVSIASSYQGKGLSIQDLTQEGSIGLLHGAIKFNPERGYKLSTY 792
NGRES ++I Y LVVSIA+ YQGKGLS+QDL QEGSIGLL GA +F+P+RGYKLSTY
Sbjct: 185 NGRESRERINQSYRRLVVSIAARYQGKGLSLQDLIQEGSIGLLRGAERFDPDRGYKLSTY 244
Query: 793 AYWWIRQSITRAIANKSRIIRLPGTISELMPRICEANNALSRKLRRFPTYEEISESINAN 972
YWWIRQ+I RAIANKSRIIRLPG+I E++ +I EA LSR+LRR PTY+EI+E I+ N
Sbjct: 245 VYWWIRQAIVRAIANKSRIIRLPGSICEMVAKIAEARTVLSRRLRRLPTYDEIAEFIDVN 304
Query: 973 ASSVRLAIERNRPVISLDQAMTSRGYISLQHIIPGPDEITPEALVKKELLKPEIGKLFET 1152
S+VRL ER+R IS+DQA+TS+G ++LQ IIPGPDE TP+ +VK++L+K E+ + T
Sbjct: 305 VSTVRLVSERSRTPISVDQAVTSQGCMTLQEIIPGPDETTPQKMVKRQLMKQEVERALNT 364
Query: 1153 LCDREKQILRLHYGLNGESGWSFEEIGRMFKLSRERVRQINFAALSKIRETNQINDLNYF 1332
LC+RE ILRL++G+NGE+ SFEEIGR+ KLSRERVRQIN ALSK+R+T+ ++ L +
Sbjct: 365 LCEREAYILRLYFGINGETPLSFEEIGRLMKLSRERVRQINSIALSKLRQTSVVDYLKLY 424
Query: 1333 L 1335
+
Sbjct: 425 M 425
>ref|NP_196877.1| sigma factor 4 [Arabidopsis thaliana]
gi|75216509|sp|Q9ZSL6.1|SIGD_ARATH RecName: Full=RNA
polymerase sigma factor sigD, chloroplastic; Short=Sigma
factor D; Short=Sigma-D; AltName: Full=RNA polymerase
sigma factor sig4; Short=Atsig4; Short=Sigma factor 4;
Flags: Precursor gi|3983260|gb|AAC97954.1| sigma-like
factor [Arabidopsis thaliana] gi|4972296|dbj|BAA78110.1|
RNA polymerase sigma subunit SigD [Arabidopsis thaliana]
gi|9758039|dbj|BAB08700.1| sigma-like factor [Arabidopsis
thaliana] gi|332004550|gb|AED91933.1| sigma factor 4
[Arabidopsis thaliana]
Length = 419
Score = 298 bits (764), Expect = 2e-78
Identities = 154/300 (51%), Positives = 211/300 (70%)
Frame = +1
Query: 433 KSRFMTPKEEATFSWYLKERARIEGVRREVMAEMGGNEVSTKQWAKAAGISLHKLDRILW 612
+S F++ EE YLKE A++E + V NE+ + A G + IL
Sbjct: 119 RSGFLSRLEEVQLCLYLKEGAKLENLGTSVEE----NEMVSVLLASGRGKKKRSANEILC 174
Query: 613 NGRESEKKITSCYHGLVVSIASSYQGKGLSIQDLTQEGSIGLLHGAIKFNPERGYKLSTY 792
+E+ +KIT CY LVVSIA+ YQGKGL++QDL QEGSIGLL GA +F+P+RGYKLSTY
Sbjct: 175 RRKEAREKITRCYRRLVVSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPDRGYKLSTY 234
Query: 793 AYWWIRQSITRAIANKSRIIRLPGTISELMPRICEANNALSRKLRRFPTYEEISESINAN 972
YWWI+Q+I RAIA+KSR+++LPG++ EL ++ EA+N L+RKLRR P+ EEI+E +N N
Sbjct: 235 VYWWIKQAILRAIAHKSRLVKLPGSMWELTAKVAEASNVLTRKLRRQPSCEEIAEHLNLN 294
Query: 973 ASSVRLAIERNRPVISLDQAMTSRGYISLQHIIPGPDEITPEALVKKELLKPEIGKLFET 1152
S+VRLA+ER+R +SLD+ + G ++LQ I+ GPDE PE +VK+E +K EI +L +
Sbjct: 295 VSAVRLAVERSRSPVSLDRVASQNGRMTLQEIVRGPDETRPEEMVKREHMKHEIEQLLGS 354
Query: 1153 LCDREKQILRLHYGLNGESGWSFEEIGRMFKLSRERVRQINFAALSKIRETNQINDLNYF 1332
L RE ++L L++GLNGE+ SFEEIG+ KLSRERVRQIN AL K+R + +NDL +
Sbjct: 355 LTARESRVLGLYFGLNGETPMSFEEIGKSLKLSRERVRQINGIALKKLRNVHNVNDLKIY 414
>ref|XP_004169825.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Cucumis sativus]
Length = 341
Score = 291 bits (744), Expect = 4e-76
Identities = 149/303 (49%), Positives = 210/303 (69%)
Frame = +1
Query: 427 PRKSRFMTPKEEATFSWYLKERARIEGVRREVMAEMGGNEVSTKQWAKAAGISLHKLDRI 606
P + +++PKEEA LKE +E V+ +M E +E + KQ A A G +DRI
Sbjct: 39 PLRPGYLSPKEEAELCLCLKEAVLLENVKTRIM-ETQEHEPTNKQLAIAMGTKSGCIDRI 97
Query: 607 LWNGRESEKKITSCYHGLVVSIASSYQGKGLSIQDLTQEGSIGLLHGAIKFNPERGYKLS 786
L RES ++ CY LV+SIA+ YQGKGLS+QDLTQEG+IGLL GA +F P RG+KLS
Sbjct: 98 LCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLS 157
Query: 787 TYAYWWIRQSITRAIANKSRIIRLPGTISELMPRICEANNALSRKLRRFPTYEEISESIN 966
TYAYWWIRQ+I RA+ KSR++RLPG + +++ RI E NN L KL R PT +E++ES+
Sbjct: 158 TYAYWWIRQAIIRALDKKSRLVRLPGHMGQMVARIAEENNHLGIKLSRPPTNKEVAESLK 217
Query: 967 ANASSVRLAIERNRPVISLDQAMTSRGYISLQHIIPGPDEITPEALVKKELLKPEIGKLF 1146
+ S++RL +ER++ IS++Q + R ++LQ I+PGPD +TPE +V ++L+K E+ +L
Sbjct: 218 VHLSTIRLVMERSKRPISINQPVNDRSCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLL 277
Query: 1147 ETLCDREKQILRLHYGLNGESGWSFEEIGRMFKLSRERVRQINFAALSKIRETNQINDLN 1326
TL RE +IL L++GLNGE SFEEIG+ LSRE +RQ N A LSK+++T+ ++ L
Sbjct: 278 NTLSKREARILSLYFGLNGEIPQSFEEIGKSLNLSRETIRQTNIATLSKLKKTDVLDYLK 337
Query: 1327 YFL 1335
+L
Sbjct: 338 DYL 340
>ref|XP_004149725.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Cucumis sativus]
Length = 436
Score = 291 bits (744), Expect = 4e-76
Identities = 149/303 (49%), Positives = 210/303 (69%)
Frame = +1
Query: 427 PRKSRFMTPKEEATFSWYLKERARIEGVRREVMAEMGGNEVSTKQWAKAAGISLHKLDRI 606
P + +++PKEEA LKE +E V+ +M E +E + KQ A A G +DRI
Sbjct: 134 PLRPGYLSPKEEAELCLCLKEAVLLENVKTRIM-ETQEHEPTNKQLAIAMGTKSGCIDRI 192
Query: 607 LWNGRESEKKITSCYHGLVVSIASSYQGKGLSIQDLTQEGSIGLLHGAIKFNPERGYKLS 786
L RES ++ CY LV+SIA+ YQGKGLS+QDLTQEG+IGLL GA +F P RG+KLS
Sbjct: 193 LCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLS 252
Query: 787 TYAYWWIRQSITRAIANKSRIIRLPGTISELMPRICEANNALSRKLRRFPTYEEISESIN 966
TYAYWWIRQ+I RA+ KSR++RLPG + +++ RI E NN L KL R PT +E++ES+
Sbjct: 253 TYAYWWIRQAIIRALDKKSRLVRLPGHMGQMVARIAEENNHLGIKLSRPPTNKEVAESLK 312
Query: 967 ANASSVRLAIERNRPVISLDQAMTSRGYISLQHIIPGPDEITPEALVKKELLKPEIGKLF 1146
+ S++RL +ER++ IS++Q + R ++LQ I+PGPD +TPE +V ++L+K E+ +L
Sbjct: 313 VHLSTIRLVMERSKRPISINQPVNDRSCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLL 372
Query: 1147 ETLCDREKQILRLHYGLNGESGWSFEEIGRMFKLSRERVRQINFAALSKIRETNQINDLN 1326
TL RE +IL L++GLNGE SFEEIG+ LSRE +RQ N A LSK+++T+ ++ L
Sbjct: 373 NTLSKREARILSLYFGLNGEIPQSFEEIGKSLNLSRETIRQTNIATLSKLKKTDVLDYLK 432
Query: 1327 YFL 1335
+L
Sbjct: 433 DYL 435