BLASTX nr result

ID: Scutellaria24_contig00008905 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00008905
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACT21194.1| zinc finger protein [Carica papaya]                     71   8e-11
ref|XP_002317728.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
ref|XP_003549174.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    69   4e-10
emb|CBI35278.3| unnamed protein product [Vitis vinifera]               68   9e-10
ref|XP_002267134.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    68   9e-10

>gb|ACT21194.1| zinc finger protein [Carica papaya]
          Length = 340

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 45/126 (35%), Positives = 57/126 (45%), Gaps = 5/126 (3%)
 Frame = -1

Query: 363 AGNQYFCYQCERQVTITPPNSPTDELVCPNCLGGFLEESDTAPPSNPTNTVPDPFDGSFP 184
           +G  YFCYQC R V I+P   P+ +L+CP C GGFLEE +   P+  T  + +PFD  FP
Sbjct: 4   SGQPYFCYQCNRTVRISPSPCPSSDLLCPTCNGGFLEELENPNPNQQTLNL-NPFDSPFP 62

Query: 183 --SIGGLPLVFSSSYAXXXXXXXXXXXXXXXXXXXXXXXXXGTRSPNE---FNPFAFLNN 19
             S    P  F    A                          T  PN+   FNPF FL N
Sbjct: 63  FLSSPNSPHPFDDLSA---------------FFGGMVPPPSATARPNDTEVFNPFLFLQN 107

Query: 18  YINELQ 1
           Y+  L+
Sbjct: 108 YLQTLR 113


>ref|XP_002317728.1| predicted protein [Populus trichocarpa] gi|222858401|gb|EEE95948.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 44/124 (35%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
 Frame = -1

Query: 351 YFCYQCERQVTITPPNSPTDELVCPNCLGGFLEESDTA-PPSNPTNT------VPDPFDG 193
           YFCYQC+R VTITP  SPT +L CPNC  GFLEE ++  P SNP ++      + D F  
Sbjct: 13  YFCYQCDRTVTITP--SPTSDLSCPNCQEGFLEECESPNPSSNPVDSGLGPAILLDEFAS 70

Query: 192 SFPSIGGLPLVFSSSYAXXXXXXXXXXXXXXXXXXXXXXXXXGTRSPNEFNPFAFLNNYI 13
            F  +   P   ++S                             + P+ FNPFAFL NY+
Sbjct: 71  IFGGMAPTPRSSNNSTTTNSSSASPLF-----------------QDPDGFNPFAFLQNYL 113

Query: 12  NELQ 1
             ++
Sbjct: 114 QTMR 117


>ref|XP_003549174.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 369

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 43/120 (35%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
 Frame = -1

Query: 354 QYFCYQCERQVTITPPNSPTDELVCPNCLGGFLEESDTAPPSNPTNTVPDPFDGSFPSIG 175
           QYFC+QC R V+I+P  SP+ +L+CP C GGFLEE +  P  NP    P+PF   FP  G
Sbjct: 19  QYFCHQCNRTVSISP--SPSSDLLCPTCNGGFLEELE-FPIPNPNPNPPNPFFPDFPLAG 75

Query: 174 G--LPLVFSSSYAXXXXXXXXXXXXXXXXXXXXXXXXXGTRSPNEFNPFAFLNNYINELQ 1
              +PLV   + A                            + + FNP  FL NY   L+
Sbjct: 76  AATIPLVLPGAAA-----------SPPFEDLSALFGNRPDAAADAFNPLVFLQNYFQTLR 124


>emb|CBI35278.3| unnamed protein product [Vitis vinifera]
          Length = 416

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 40/123 (32%), Positives = 57/123 (46%)
 Frame = -1

Query: 369 TVAGNQYFCYQCERQVTITPPNSPTDELVCPNCLGGFLEESDTAPPSNPTNTVPDPFDGS 190
           + A   YFCYQC   V+ITP  SPT + +CP+C  GFLEE +   P+     +P+PF G 
Sbjct: 63  SAAPQSYFCYQCNLTVSITP--SPTSDPLCPHCNDGFLEEVENPNPNPIPVPIPNPFLG- 119

Query: 189 FPSIGGLPLVFSSSYAXXXXXXXXXXXXXXXXXXXXXXXXXGTRSPNEFNPFAFLNNYIN 10
           F  +  L    +++ A                             P+ F+PFAFL NY+ 
Sbjct: 120 FSDLPSLSAAGATATAFPPLVFSTAAGGSIDLQNSVDFPGLFGADPDAFHPFAFLQNYLQ 179

Query: 9   ELQ 1
            L+
Sbjct: 180 TLR 182


>ref|XP_002267134.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 1 [Vitis
           vinifera] gi|359491811|ref|XP_003634328.1| PREDICTED: E3
           ubiquitin-protein ligase RING1 isoform 2 [Vitis
           vinifera]
          Length = 369

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 40/123 (32%), Positives = 57/123 (46%)
 Frame = -1

Query: 369 TVAGNQYFCYQCERQVTITPPNSPTDELVCPNCLGGFLEESDTAPPSNPTNTVPDPFDGS 190
           + A   YFCYQC   V+ITP  SPT + +CP+C  GFLEE +   P+     +P+PF G 
Sbjct: 19  SAAPQSYFCYQCNLTVSITP--SPTSDPLCPHCNDGFLEEVENPNPNPIPVPIPNPFLG- 75

Query: 189 FPSIGGLPLVFSSSYAXXXXXXXXXXXXXXXXXXXXXXXXXGTRSPNEFNPFAFLNNYIN 10
           F  +  L    +++ A                             P+ F+PFAFL NY+ 
Sbjct: 76  FSDLPSLSAAGATATAFPPLVFSTAAGGSIDLQNSVDFPGLFGADPDAFHPFAFLQNYLQ 135

Query: 9   ELQ 1
            L+
Sbjct: 136 TLR 138


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