BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00008836
         (1178 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271258.1| PREDICTED: exosome complex component rrp4-li...   421   e-115
ref|XP_004144644.1| PREDICTED: exosome complex component RRP4-li...   413   e-113
emb|CBI32318.3| unnamed protein product [Vitis vinifera]              412   e-113
ref|XP_003554237.1| PREDICTED: exosome complex component RRP4-li...   403   e-110
ref|XP_003609733.1| Exosome complex exonuclease RRP4 [Medicago t...   401   e-109

>ref|XP_002271258.1| PREDICTED: exosome complex component rrp4-like [Vitis vinifera]
          Length = 330

 Score =  421 bits (1081), Expect = e-115
 Identities = 209/329 (63%), Positives = 259/329 (78%), Gaps = 3/329 (0%)
 Frame = +3

Query: 39   MRGLQLSLNKGQKLRFERALEQLESFSSKANXXXXXXXXXXXXXNYDGAILKGHGTAEMD 218
            MRG QLSLN+ QKLR +RALEQLES SSK+N             NY+  +LKGHGT ++D
Sbjct: 1    MRGFQLSLNQTQKLRLQRALEQLESLSSKSNSNASVAVADTIPVNYEDGVLKGHGTLDLD 60

Query: 219  GRLVATVCGVVERVNMLVHVRALRARYKPDTGDIVIGRVIEVAPKRWRLEINSSQDAVLM 398
            G +VAT+CGVVERVN LV++R LRARYKP+TGDI++GRV E+APKRWRL+IN SQDAVLM
Sbjct: 61   GEVVATLCGVVERVNKLVYIRTLRARYKPETGDIIVGRVTEIAPKRWRLDINFSQDAVLM 120

Query: 399  LSSLNLPDGIQRRKTAIDELNMRSIFEENDVICAEVHSFQH-GSPHLQTRSXXXXXXXXX 575
            LSS+NLPDGIQRR+TA+DELNMRSIFEEND++CAEV  FQH GS HLQ RS         
Sbjct: 121  LSSMNLPDGIQRRRTAVDELNMRSIFEENDIVCAEVRGFQHDGSLHLQARSQKYGKLERG 180

Query: 576  XXXTIPPYLVKKRKQHFHYLDQFGIDLILGCNGFIWVGEHVEVRDEMVDDLSNKSEQQIV 755
               TI PYLVK+RKQH HYL++FG+DLILGCNGFIWVGEHVE +  +++D ++K+EQ   
Sbjct: 181  QVLTISPYLVKRRKQHLHYLEEFGVDLILGCNGFIWVGEHVEAKGILIEDQTDKAEQLNT 240

Query: 756  KSWNT--VGIEEIEVTDTPLDIRQSICRTANAIRVLSTLGFTITADVVMEIVNLSMSLNL 929
            KS ++  + +EE E T T L+ RQ+ICR ANA+RVL+ LGF++T +V+ E VNLS SLNL
Sbjct: 241  KSSSSTFMSLEEQERTYTSLETRQNICRIANAVRVLANLGFSVTVEVIKETVNLSSSLNL 300

Query: 930  DIHEMLGAEFYVIVAEKEVERRSLPTKRR 1016
            DIHEMLG+EFYV+VAE E  R+S+ TK++
Sbjct: 301  DIHEMLGSEFYVLVAEGEATRKSMFTKKK 329


>ref|XP_004144644.1| PREDICTED: exosome complex component RRP4-like [Cucumis sativus]
          Length = 327

 Score =  413 bits (1062), Expect = e-113
 Identities = 208/327 (63%), Positives = 253/327 (77%), Gaps = 2/327 (0%)
 Frame = +3

Query: 39   MRGLQLSLNKGQKLRFERALEQLESFSSKANXXXXXXXXXXXXXNYDGAILKGHGTAEMD 218
            M+GLQLSLN  QK+R ERA E+L+S SSK N             NY+  +LKGHGT +++
Sbjct: 1    MKGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLN 60

Query: 219  GRLVATVCGVVERVNMLVHVRALRARYKPDTGDIVIGRVIEVAPKRWRLEINSSQDAVLM 398
            G +VA++CGVVERVN L++VRALRARYKP+ GDIV+GRV EVAPKRWRL+IN  QDAVLM
Sbjct: 61   GEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYCQDAVLM 120

Query: 399  LSSLNLPDGIQRRKTAIDELNMRSIFEENDVICAEVHSFQHGSPHLQTRSXXXXXXXXXX 578
            LSS+NLPDGIQRR+TA+DELNMRSIFEENDVICAEV   QH   HLQ RS          
Sbjct: 121  LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQ 180

Query: 579  XXTIPPYLVKKRKQHFHYLDQFGIDLILGCNGFIWVGEHVE--VRDEMVDDLSNKSEQQI 752
              T+ PYL+K+RKQHFH+L+Q+GIDLILGCNGFIW+GEHV+  V D M++D  +K EQ+ 
Sbjct: 181  LLTVSPYLIKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKG 240

Query: 753  VKSWNTVGIEEIEVTDTPLDIRQSICRTANAIRVLSTLGFTITADVVMEIVNLSMSLNLD 932
             K   T G  +++   TPL+ RQ+ICRTANAIRVLSTLGF +T +V+MEIVNLS+SLN+D
Sbjct: 241  SKFEGTFG-NQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNID 299

Query: 933  IHEMLGAEFYVIVAEKEVERRSLPTKR 1013
            +HEMLG+EF V+ AEKEVERRS   KR
Sbjct: 300  VHEMLGSEFCVLTAEKEVERRSSSKKR 326


>emb|CBI32318.3| unnamed protein product [Vitis vinifera]
          Length = 320

 Score =  412 bits (1060), Expect = e-113
 Identities = 206/327 (62%), Positives = 253/327 (77%), Gaps = 1/327 (0%)
 Frame = +3

Query: 39   MRGLQLSLNKGQKLRFERALEQLESFSSKANXXXXXXXXXXXXXNYDGAILKGHGTAEMD 218
            MRG QLSLN+ QKLR +RALEQLES SSK+N             NY+  +LKGHGT ++D
Sbjct: 1    MRGFQLSLNQTQKLRLQRALEQLESLSSKSNSNASVAVADTIPVNYEDGVLKGHGTLDLD 60

Query: 219  GRLVATVCGVVERVNMLVHVRALRARYKPDTGDIVIGRVIEVAPKRWRLEINSSQDAVLM 398
            G +VAT+CGVVERVN LV++R LRARYKP+TGDI++GRV E+APKRWRL+IN SQDAVLM
Sbjct: 61   GEVVATLCGVVERVNKLVYIRTLRARYKPETGDIIVGRVTEIAPKRWRLDINFSQDAVLM 120

Query: 399  LSSLNLPDGIQRRKTAIDELNMRSIFEENDVICAEVHSFQH-GSPHLQTRSXXXXXXXXX 575
            LSS+NLPDGIQRR+TA+DELNMRSIFEEND++CAEV  FQH GS HLQ RS         
Sbjct: 121  LSSMNLPDGIQRRRTAVDELNMRSIFEENDIVCAEVRGFQHDGSLHLQARSQKYGKLERG 180

Query: 576  XXXTIPPYLVKKRKQHFHYLDQFGIDLILGCNGFIWVGEHVEVRDEMVDDLSNKSEQQIV 755
               TI PYLVK+RKQH HYL++FG+DLILGCNGFIWVGEHVE +  +++D ++K+EQ   
Sbjct: 181  QVLTISPYLVKRRKQHLHYLEEFGVDLILGCNGFIWVGEHVEAKGILIEDQTDKAEQLNT 240

Query: 756  KSWNTVGIEEIEVTDTPLDIRQSICRTANAIRVLSTLGFTITADVVMEIVNLSMSLNLDI 935
            KS         + T T L+ RQ+ICR ANA+RVL+ LGF++T +V+ E VNLS SLNLDI
Sbjct: 241  KS--------SKRTYTSLETRQNICRIANAVRVLANLGFSVTVEVIKETVNLSSSLNLDI 292

Query: 936  HEMLGAEFYVIVAEKEVERRSLPTKRR 1016
            HEMLG+EFYV+VAE E  R+S+ TK++
Sbjct: 293  HEMLGSEFYVLVAEGEATRKSMFTKKK 319


>ref|XP_003554237.1| PREDICTED: exosome complex component RRP4-like [Glycine max]
          Length = 327

 Score =  403 bits (1036), Expect = e-110
 Identities = 198/327 (60%), Positives = 255/327 (77%), Gaps = 1/327 (0%)
 Frame = +3

Query: 39   MRGLQLSLNKGQKLRFERALEQLESFSSKANXXXXXXXXXXXXXNYDGAILKGHGTAEMD 218
            MR +QL L++ QK+R ++ALEQLES S+K N             N++  +LKGHGTA+++
Sbjct: 1    MREIQLPLSQTQKVRLQKALEQLESLSTKVNSDASVIIADSIHVNHEDGVLKGHGTADLN 60

Query: 219  GRLVATVCGVVERVNMLVHVRALRARYKPDTGDIVIGRVIEVAPKRWRLEINSSQDAVLM 398
            G +VAT+CGVVERVN LV+VRALR+RYKP+ GDIVIGRV+EVA KRWRLEIN +QDAVL+
Sbjct: 61   GEVVATLCGVVERVNKLVYVRALRSRYKPEVGDIVIGRVVEVAQKRWRLEINYNQDAVLL 120

Query: 399  LSSLNLPDGIQRRKTAIDELNMRSIFEENDVICAEVHSFQHGSPHLQTRSXXXXXXXXXX 578
            LSS+N+PDG+QRR+TA+DELNMR IFEENDV+CAEV  FQH   HLQ RS          
Sbjct: 121  LSSMNMPDGVQRRRTAVDELNMRCIFEENDVVCAEVRGFQHDGLHLQARSRKYGKLNRGQ 180

Query: 579  XXTIPPYLVKKRKQHFHYLDQFGIDLILGCNGFIWVGEHVEVRDEMVDDLSNKSEQQIV- 755
              T+PPYLVK++KQHFH+L++FGIDLILGCNGFIWVGEHVE +D+M++D  ++S+ Q++ 
Sbjct: 181  LLTVPPYLVKRQKQHFHHLEEFGIDLILGCNGFIWVGEHVEAKDDMIEDQVSQSDSQVLF 240

Query: 756  KSWNTVGIEEIEVTDTPLDIRQSICRTANAIRVLSTLGFTITADVVMEIVNLSMSLNLDI 935
             + N V +EE E   T L+ R+ I R ANA+RVLSTLGF IT +++  I++LS+S+NLDI
Sbjct: 241  PNKNCVSLEEQEKNYTILETRKYISRAANAVRVLSTLGFNITLEIIKGIIDLSLSMNLDI 300

Query: 936  HEMLGAEFYVIVAEKEVERRSLPTKRR 1016
            H+MLG+EF V+VAEKE ERRS   KRR
Sbjct: 301  HDMLGSEFCVLVAEKEAERRSSMKKRR 327


>ref|XP_003609733.1| Exosome complex exonuclease RRP4 [Medicago truncatula]
            gi|217074186|gb|ACJ85453.1| unknown [Medicago truncatula]
            gi|355510788|gb|AES91930.1| Exosome complex exonuclease
            RRP4 [Medicago truncatula] gi|388516977|gb|AFK46550.1|
            unknown [Medicago truncatula]
          Length = 327

 Score =  401 bits (1031), Expect = e-109
 Identities = 199/327 (60%), Positives = 253/327 (77%), Gaps = 1/327 (0%)
 Frame = +3

Query: 39   MRGLQLSLNKGQKLRFERALEQLESFSSKANXXXXXXXXXXXXXNYDGAILKGHGTAEMD 218
            MRG+ L L++ QKLR ++ALE LES SSK N             N++  +LKGHGTA++D
Sbjct: 1    MRGIHLQLSQTQKLRLQKALEHLESLSSKVNSDSSVTIADSIPVNHEDGVLKGHGTADLD 60

Query: 219  GRLVATVCGVVERVNMLVHVRALRARYKPDTGDIVIGRVIEVAPKRWRLEINSSQDAVLM 398
            G +VAT+CGVVERVN LV+VRALR+RYKP+ GDIVIGRVIEVA KRWRL+IN SQ+A LM
Sbjct: 61   GEVVATLCGVVERVNKLVYVRALRSRYKPEVGDIVIGRVIEVAQKRWRLDINYSQNAYLM 120

Query: 399  LSSLNLPDGIQRRKTAIDELNMRSIFEENDVICAEVHSFQHGSPHLQTRSXXXXXXXXXX 578
            LS++N+PDG+QRR+TA+DELNMR IFEE DVICAEV  FQH   HLQ RS          
Sbjct: 121  LSAMNMPDGVQRRRTALDELNMRCIFEEADVICAEVRGFQHDGLHLQARSQKYGKLSTGQ 180

Query: 579  XXTIPPYLVKKRKQHFHYLDQFGIDLILGCNGFIWVGEHVEVRDEMVDDLSNKSEQQIV- 755
              T+ PYLVK++KQHFH+L+Q+GIDLI+GCNGFIWVGEHVEVRD+MV+D  N+S+ Q++ 
Sbjct: 181  LLTVTPYLVKRQKQHFHHLEQYGIDLIIGCNGFIWVGEHVEVRDDMVEDQVNQSDPQVLT 240

Query: 756  KSWNTVGIEEIEVTDTPLDIRQSICRTANAIRVLSTLGFTITADVVMEIVNLSMSLNLDI 935
             + N+V +EE E   T L+ R+ ICR ANA+R LSTLGF IT++++  +++LS+S NLDI
Sbjct: 241  PNKNSVSLEEQEKKYTALETRKYICRAANAVRGLSTLGFIITSEIIKGVIDLSLSANLDI 300

Query: 936  HEMLGAEFYVIVAEKEVERRSLPTKRR 1016
            H+MLG+EF V+VAEKE ERRS   K+R
Sbjct: 301  HDMLGSEFCVLVAEKEAERRSSNKKKR 327