BLASTX nr result

ID: Scutellaria24_contig00008800 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00008800
         (762 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ33947.1| unnamed protein product [Thellungiella halophila]     181   1e-43
ref|NP_196805.2| pre-mRNA-splicing factor ATP-dependent RNA heli...   181   1e-43
tpg|DAA40943.1| TPA: putative RNA helicase family protein [Zea m...   179   6e-43
ref|XP_002462912.1| hypothetical protein SORBIDRAFT_02g034295 [S...   179   7e-43
ref|XP_002264955.2| PREDICTED: pre-mRNA-splicing factor ATP-depe...   178   1e-42

>dbj|BAJ33947.1| unnamed protein product [Thellungiella halophila]
          Length = 1255

 Score =  181 bits (460), Expect = 1e-43
 Identities = 93/113 (82%), Positives = 97/113 (85%)
 Frame = -3

Query: 532 GETGSGKTTQLTQYLHEDGYTNNGVIGCTQPRRVAAMSVAKRVSEEMETELGDLVGYAIR 353
           GETGSGKTTQLTQYLHEDGYT NG++GCTQPRRVAAMSVAKRVSEEMETELGD VGYAIR
Sbjct: 581 GETGSGKTTQLTQYLHEDGYTINGIVGCTQPRRVAAMSVAKRVSEEMETELGDKVGYAIR 640

Query: 352 FEDVTGPNTVIKYMTDGVLLRETLKDFDLDKYRL*LSL*PDGVCLSPAHINSL 194
           FEDVTGPNTVIKYMTDGVLLRETLKD DLDKYR+        V +  AH  SL
Sbjct: 641 FEDVTGPNTVIKYMTDGVLLRETLKDSDLDKYRV--------VVMDEAHERSL 685


>ref|NP_196805.2| pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
           [Arabidopsis thaliana] gi|332004458|gb|AED91841.1|
           pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16 [Arabidopsis thaliana]
          Length = 1255

 Score =  181 bits (459), Expect = 1e-43
 Identities = 92/113 (81%), Positives = 97/113 (85%)
 Frame = -3

Query: 532 GETGSGKTTQLTQYLHEDGYTNNGVIGCTQPRRVAAMSVAKRVSEEMETELGDLVGYAIR 353
           GETGSGKTTQLTQYLHEDGYT NG++GCTQPRRVAAMSVAKRVSEEMETELGD +GYAIR
Sbjct: 581 GETGSGKTTQLTQYLHEDGYTINGIVGCTQPRRVAAMSVAKRVSEEMETELGDKIGYAIR 640

Query: 352 FEDVTGPNTVIKYMTDGVLLRETLKDFDLDKYRL*LSL*PDGVCLSPAHINSL 194
           FEDVTGPNTVIKYMTDGVLLRETLKD DLDKYR+        V +  AH  SL
Sbjct: 641 FEDVTGPNTVIKYMTDGVLLRETLKDSDLDKYRV--------VVMDEAHERSL 685


>tpg|DAA40943.1| TPA: putative RNA helicase family protein [Zea mays]
          Length = 1450

 Score =  179 bits (454), Expect = 6e-43
 Identities = 91/113 (80%), Positives = 96/113 (84%)
 Frame = -3

Query: 532  GETGSGKTTQLTQYLHEDGYTNNGVIGCTQPRRVAAMSVAKRVSEEMETELGDLVGYAIR 353
            GETGSGKTTQLTQYLHEDGYT  GV+GCTQPRRVAAMSVAKRVSEEMET+LGD VGYAIR
Sbjct: 776  GETGSGKTTQLTQYLHEDGYTTTGVVGCTQPRRVAAMSVAKRVSEEMETDLGDKVGYAIR 835

Query: 352  FEDVTGPNTVIKYMTDGVLLRETLKDFDLDKYRL*LSL*PDGVCLSPAHINSL 194
            FEDVTGPNT+IKYMTDGVLLRETLKD DLDKYR+        V +  AH  SL
Sbjct: 836  FEDVTGPNTIIKYMTDGVLLRETLKDADLDKYRV--------VVMDEAHERSL 880


>ref|XP_002462912.1| hypothetical protein SORBIDRAFT_02g034295 [Sorghum bicolor]
           gi|241926289|gb|EER99433.1| hypothetical protein
           SORBIDRAFT_02g034295 [Sorghum bicolor]
          Length = 1271

 Score =  179 bits (453), Expect = 7e-43
 Identities = 90/113 (79%), Positives = 96/113 (84%)
 Frame = -3

Query: 532 GETGSGKTTQLTQYLHEDGYTNNGVIGCTQPRRVAAMSVAKRVSEEMETELGDLVGYAIR 353
           GETGSGKTTQLTQYLHEDGYT  GV+GCTQPRRVAAMSVAKRVSEEMET+LGD VGYAIR
Sbjct: 597 GETGSGKTTQLTQYLHEDGYTTTGVVGCTQPRRVAAMSVAKRVSEEMETDLGDKVGYAIR 656

Query: 352 FEDVTGPNTVIKYMTDGVLLRETLKDFDLDKYRL*LSL*PDGVCLSPAHINSL 194
           FEDVTGPNT+IKYMTDGVLLRETLKD DLDKYR+        + +  AH  SL
Sbjct: 657 FEDVTGPNTIIKYMTDGVLLRETLKDADLDKYRV--------IVMDEAHERSL 701


>ref|XP_002264955.2| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like [Vitis vinifera]
          Length = 1289

 Score =  178 bits (451), Expect = 1e-42
 Identities = 90/113 (79%), Positives = 96/113 (84%)
 Frame = -3

Query: 532 GETGSGKTTQLTQYLHEDGYTNNGVIGCTQPRRVAAMSVAKRVSEEMETELGDLVGYAIR 353
           GETGSGKTTQLTQYLHEDGYT NG++GCTQPRRVAAMSVAKRVSEEMETELGD VGYAIR
Sbjct: 614 GETGSGKTTQLTQYLHEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMETELGDKVGYAIR 673

Query: 352 FEDVTGPNTVIKYMTDGVLLRETLKDFDLDKYRL*LSL*PDGVCLSPAHINSL 194
           FEDVTGPNT IKYMTDGVL+RETLKD +LDKYR+        V +  AH  SL
Sbjct: 674 FEDVTGPNTKIKYMTDGVLMRETLKDSELDKYRV--------VVMDEAHERSL 718


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