BLASTX nr result

ID: Scutellaria24_contig00008799 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00008799
         (975 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512344.1| excision repair cross-complementing 1 ercc1,...   322   1e-85
ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-...   313   3e-83
ref|XP_003591075.1| DNA excision repair protein ERCC-1 [Medicago...   311   1e-82
ref|XP_003535349.1| PREDICTED: DNA excision repair protein ERCC-...   308   1e-81
ref|XP_004138378.1| PREDICTED: DNA excision repair protein ERCC-...   300   3e-79

>ref|XP_002512344.1| excision repair cross-complementing 1 ercc1, putative [Ricinus
           communis] gi|223548305|gb|EEF49796.1| excision repair
           cross-complementing 1 ercc1, putative [Ricinus communis]
          Length = 392

 Score =  322 bits (824), Expect = 1e-85
 Identities = 169/271 (62%), Positives = 194/271 (71%), Gaps = 1/271 (0%)
 Frame = +1

Query: 166 MEKKDSLESHKQLEGIQKQNETPFVVRIPSYEEVVESSQ-PKTXXXXXXXXXXXXXXNFI 342
           ME+++  E  ++    +K N    V++IPSY+EV+ESSQ PKT              +FI
Sbjct: 1   MERQEQQEEEERSN--RKSNAKKVVIQIPSYQEVIESSQNPKTESLFKPSQTFSQAFSFI 58

Query: 343 KNSEFYTTXXXXXXXXXXXXXXXXXXHATHTRQRALSEAPSTSVSSSGANRNAILVSHRQ 522
           K+SEFYT                   ++  T Q   S  PS SV+ +G  RN+ILVSHRQ
Sbjct: 59  KDSEFYTPPPQSSAVSNNA-------NSIQTTQSVPS--PSQSVALTGNYRNSILVSHRQ 109

Query: 523 NGNPLLKHIRNVRWVFADIVCDYLLGQNSCALYLSLRYHLLHPDYLYFRIRELQKNFKLR 702
            GNPLLKHIRNVRW FAD+VCDYLLGQN C+LYLSLRYHLLHPDYLY+RIRELQKN+KLR
Sbjct: 110 KGNPLLKHIRNVRWAFADVVCDYLLGQNCCSLYLSLRYHLLHPDYLYYRIRELQKNYKLR 169

Query: 703 XXXXXXXXXXXXKPLLEVTKTALLHDCTLLCGWSLEECGRYLETIKVYENKPADLIQGQM 882
                       KPLLEVTKTALLHDCTLLC WSLEECGRYLETIK+YENKPADLIQGQM
Sbjct: 170 VVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKMYENKPADLIQGQM 229

Query: 883 DMDYMSRLNHALTSLRHVNKTDVVTLGSTFG 975
           D DY+SRL HALT++RHVNKTDVVTLGSTFG
Sbjct: 230 DTDYLSRLTHALTTIRHVNKTDVVTLGSTFG 260


>ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-1-like [Vitis vinifera]
           gi|296088298|emb|CBI36743.3| unnamed protein product
           [Vitis vinifera]
          Length = 398

 Score =  313 bits (803), Expect = 3e-83
 Identities = 170/270 (62%), Positives = 191/270 (70%), Gaps = 7/270 (2%)
 Frame = +1

Query: 187 ESHKQLE-GIQKQNETPFVVRIPSYEEVVESSQPKTXXXXXXXXXXXXXX-NFIKNSEFY 360
           E  KQ E   +K+N++  V++IPSY+EV+ESSQ KT               +F+K+S+ Y
Sbjct: 5   EEEKQRERDDEKKNKSSIVIKIPSYQEVLESSQSKTTSSLFTPSPSFSQAFSFVKSSQSY 64

Query: 361 TTXXXXXXXXXXXXXXXXXXHATHTRQRALSEAPSTSVSS-----SGANRNAILVSHRQN 525
           T                       +RQ    EAPS+S SS     S  +RNAILVSHRQ 
Sbjct: 65  TPPPPATPPPPPPPS---------SRQVEQLEAPSSSSSSPSLSRSAQSRNAILVSHRQK 115

Query: 526 GNPLLKHIRNVRWVFADIVCDYLLGQNSCALYLSLRYHLLHPDYLYFRIRELQKNFKLRX 705
           GNPLLKHIRNVRW FADIVCDYLLGQNSCALYLSLRYHLLHPDYLY+RIRELQKNFKLR 
Sbjct: 116 GNPLLKHIRNVRWDFADIVCDYLLGQNSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV 175

Query: 706 XXXXXXXXXXXKPLLEVTKTALLHDCTLLCGWSLEECGRYLETIKVYENKPADLIQGQMD 885
                      KPLLEVT+TALLHDCTLLC WSLEECGRYLETIKVYENK AD+IQGQ D
Sbjct: 176 VLCHVDVEDVIKPLLEVTRTALLHDCTLLCAWSLEECGRYLETIKVYENKSADIIQGQTD 235

Query: 886 MDYMSRLNHALTSLRHVNKTDVVTLGSTFG 975
            DY+SRL HALT++RHVNKTDVVTLGSTFG
Sbjct: 236 TDYLSRLTHALTTVRHVNKTDVVTLGSTFG 265


>ref|XP_003591075.1| DNA excision repair protein ERCC-1 [Medicago truncatula]
           gi|355480123|gb|AES61326.1| DNA excision repair protein
           ERCC-1 [Medicago truncatula]
          Length = 401

 Score =  311 bits (798), Expect = 1e-82
 Identities = 164/267 (61%), Positives = 188/267 (70%), Gaps = 4/267 (1%)
 Frame = +1

Query: 187 ESHKQLEGIQKQNETPFVVRIPSYEEVVESSQPKTXXXXXXXXXXXXXXNF--IKNSEFY 360
           E+ KQ   I K++ T  V+RIPSY+EV+ESSQ K+               F  +K+SEFY
Sbjct: 4   EAEKQNNSINKKSST--VIRIPSYQEVIESSQTKSTPPSLFVPSQTFSQAFAFVKSSEFY 61

Query: 361 TTXXXXXXXXXXXXXXXXXXHATHTRQRALSEAPSTSVSSSGA--NRNAILVSHRQNGNP 534
           +                     +     A + +P+   S+S    NRNAILVS+RQ GNP
Sbjct: 62  SPPPSLPKENAPSNASSSTPSTSSATNNAPAASPNLPNSNSQPTQNRNAILVSNRQKGNP 121

Query: 535 LLKHIRNVRWVFADIVCDYLLGQNSCALYLSLRYHLLHPDYLYFRIRELQKNFKLRXXXX 714
           LLKHIRNVRW FAD+VCD+LLGQ+SCALYLSLRYHLLHPDYLY RIRELQKNFKLR    
Sbjct: 122 LLKHIRNVRWTFADVVCDFLLGQSSCALYLSLRYHLLHPDYLYHRIRELQKNFKLRVVLC 181

Query: 715 XXXXXXXXKPLLEVTKTALLHDCTLLCGWSLEECGRYLETIKVYENKPADLIQGQMDMDY 894
                   KPLLEVTKTALLHDCTLLCGWSLEECGRYLETIKVYENKPAD+IQGQMD DY
Sbjct: 182 HVDVEDVVKPLLEVTKTALLHDCTLLCGWSLEECGRYLETIKVYENKPADIIQGQMDTDY 241

Query: 895 MSRLNHALTSLRHVNKTDVVTLGSTFG 975
           +SRL HALT++RHVNKTDVVTLG+ FG
Sbjct: 242 LSRLTHALTTVRHVNKTDVVTLGTNFG 268


>ref|XP_003535349.1| PREDICTED: DNA excision repair protein ERCC-1-like [Glycine max]
          Length = 398

 Score =  308 bits (789), Expect = 1e-81
 Identities = 166/277 (59%), Positives = 194/277 (70%), Gaps = 7/277 (2%)
 Frame = +1

Query: 166 MEKKDSLESHKQLEGIQKQNETPFVVRIPSYEEVVESSQPKTXXXXXXXXXXXXXXNF-- 339
           MEK++  E  ++     K+ ++  V+RIPSY+EVVESSQ K+               F  
Sbjct: 1   MEKQNEEEEEQK-----KKKKSSVVIRIPSYQEVVESSQAKSTPSSLFVPSQTFSEAFAF 55

Query: 340 IKNSEFYTTXXXXXXXXXXXXXXXXXXHATHTRQRALSEAPSTSVSSSGANRNAILVSHR 519
           +K+S+FY+                    +T T   A + A ST  SS   NRN+ILVSHR
Sbjct: 56  VKSSDFYSPPPKSRETGQSDAPS-----STSTPSPATAAASSTIPSSQ--NRNSILVSHR 108

Query: 520 Q-----NGNPLLKHIRNVRWVFADIVCDYLLGQNSCALYLSLRYHLLHPDYLYFRIRELQ 684
           Q      GNPLLKHIRNVRW FAD+VCDY+LGQ+SCALYLSLRYHLLHPDYLY+RIRELQ
Sbjct: 109 QCIILQKGNPLLKHIRNVRWAFADVVCDYMLGQSSCALYLSLRYHLLHPDYLYYRIRELQ 168

Query: 685 KNFKLRXXXXXXXXXXXXKPLLEVTKTALLHDCTLLCGWSLEECGRYLETIKVYENKPAD 864
           KNFKLR            KPLLEVTKTA+LHDCTLLCGWSLEECGRYLETIKVYENKPAD
Sbjct: 169 KNFKLRVVLCHVDVEDVIKPLLEVTKTAMLHDCTLLCGWSLEECGRYLETIKVYENKPAD 228

Query: 865 LIQGQMDMDYMSRLNHALTSLRHVNKTDVVTLGSTFG 975
           +IQGQMD DY+SRL H+LT++RHVNKTDVVTLG+TFG
Sbjct: 229 IIQGQMDTDYLSRLTHSLTTVRHVNKTDVVTLGTTFG 265


>ref|XP_004138378.1| PREDICTED: DNA excision repair protein ERCC-1-like [Cucumis
           sativus]
          Length = 391

 Score =  300 bits (769), Expect = 3e-79
 Identities = 161/278 (57%), Positives = 188/278 (67%), Gaps = 10/278 (3%)
 Frame = +1

Query: 172 KKDSLESHKQLEGIQKQNETPFVVRIPSYEEVVESSQPKTXXXXXXXXXXXXXXNFIKNS 351
           ++ S E + Q     K+++T  +++IPSY+EV++SSQP +               F+K+S
Sbjct: 2   EEGSAEDNFQQTPPHKKSKT--IIKIPSYQEVIDSSQPNSQSFSQAFA-------FLKSS 52

Query: 352 EFYTTXXXXXXXXXXXXXXXXXXHATHTRQRALSEAPSTSVS----------SSGANRNA 501
           EFY+                          +  + + STS S          SS  +RNA
Sbjct: 53  EFYSPPPKPPSPSSSQSLPPSNITNPRKNDQLDTSSSSTSASAATPVNSLSVSSSVSRNA 112

Query: 502 ILVSHRQNGNPLLKHIRNVRWVFADIVCDYLLGQNSCALYLSLRYHLLHPDYLYFRIREL 681
           ILVS+RQ GNPLLKHIRNVRW FAD+V DYLLGQ+SCALYLSLRYHLLHPDYLY+RIREL
Sbjct: 113 ILVSNRQKGNPLLKHIRNVRWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIREL 172

Query: 682 QKNFKLRXXXXXXXXXXXXKPLLEVTKTALLHDCTLLCGWSLEECGRYLETIKVYENKPA 861
           QKNFKLR            KPLLEVTKTALLHDCTLLC WSLEECGRYLETIKVYENKPA
Sbjct: 173 QKNFKLRVILCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPA 232

Query: 862 DLIQGQMDMDYMSRLNHALTSLRHVNKTDVVTLGSTFG 975
           DLIQG MD DY+SRL H LTS+RHVNKTDVVTLG+TFG
Sbjct: 233 DLIQGHMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFG 270


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