BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00008784
         (876 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16435.3| unnamed protein product [Vitis vinifera]              382   e-104
ref|NP_188714.2| DNA topoisomerase 6 subunit B [Arabidopsis thal...   379   e-103
ref|XP_004142138.1| PREDICTED: DNA topoisomerase 6 subunit B-lik...   375   e-102
dbj|BAB02486.1| DNA topoisomerase VI subunit B-like protein [Ara...   370   e-100
ref|XP_002885404.1| hypothetical protein ARALYDRAFT_318827 [Arab...   361   1e-97

>emb|CBI16435.3| unnamed protein product [Vitis vinifera]
          Length = 673

 Score =  382 bits (981), Expect = e-104
 Identities = 190/242 (78%), Positives = 219/242 (90%)
 Frame = +2

Query: 2    TYSGSPQVFEGHPFIVEAGLSLGGKDVKHGLNIFRFANRIPLLFEQGADVVTRTAIKRIN 181
            TYSGS QVFEGHPF+VEAG+S+GGKDVK GLNIFRFANRIPLLFEQGADVVTRTA+KRIN
Sbjct: 430  TYSGSAQVFEGHPFMVEAGVSIGGKDVKQGLNIFRFANRIPLLFEQGADVVTRTALKRIN 489

Query: 182  WNSYKINQTQDKIGVFVSIVSTKIPFKGTGKEYIGDDISEIASAVKTAIQQCCNQLKSKI 361
            WNSYKINQ QDKIGVFVSIVSTKIPFKGTGKEYIGDDISEIASAVK++IQQCC QLKSKI
Sbjct: 490  WNSYKINQAQDKIGVFVSIVSTKIPFKGTGKEYIGDDISEIASAVKSSIQQCCIQLKSKI 549

Query: 362  VKRIQAREQQERKRSLNKYIPNATGAIYEVLKEMSRSHSSKKPRCEGKDAELLKQVSARV 541
            VK+IQAR QQERKR+L+KYIP+ATGAIY+VL+EM++ H+SKK R E +DA++L++VS   
Sbjct: 550  VKKIQARVQQERKRNLSKYIPDATGAIYDVLREMAQLHASKKKRYEDEDADVLRKVSTHS 609

Query: 542  VTEETLRVKLAQHVEQVDYEMALEYATQRGVNEQPREDIYIAPLENEYNFTEFCSPVFVF 721
            +T++TL  KLA+HVEQVDYEMALEYATQ GV+E+PRE IY+  LE+  NF +F SPVF F
Sbjct: 610  ITKQTLSEKLAKHVEQVDYEMALEYATQSGVSEEPREAIYLQSLEDGKNFIDFHSPVFAF 669

Query: 722  RL 727
            RL
Sbjct: 670  RL 671


>ref|NP_188714.2| DNA topoisomerase 6 subunit B [Arabidopsis thaliana]
            gi|75169001|sp|Q9C5V6.1|TOP6B_ARATH RecName: Full=DNA
            topoisomerase 6 subunit B; Short=AtTOP6B; AltName:
            Full=Protein BRASSINOSTEROID INSENSITIVE 3; AltName:
            Full=Protein ELONGATED HYPOCOTYL 6; AltName: Full=Protein
            ROOT HAIRLESS 3 gi|12331188|emb|CAC24690.1| topoisomerase
            6 subunit B [Arabidopsis thaliana]
            gi|332642901|gb|AEE76422.1| DNA topoisomerase 6 subunit B
            [Arabidopsis thaliana]
          Length = 670

 Score =  379 bits (973), Expect = e-103
 Identities = 188/244 (77%), Positives = 220/244 (90%), Gaps = 1/244 (0%)
 Frame = +2

Query: 2    TYSGSPQVFEGHPFIVEAGLSLGGKDVKHGLNIFRFANRIPLLFEQGADVVTRTAIKRIN 181
            TYSGS QVFEGHPFIVEAG+SLGG+DVK G+NIFRFANRIPLLFEQGADVVTRTA+KRIN
Sbjct: 426  TYSGSAQVFEGHPFIVEAGVSLGGRDVKQGINIFRFANRIPLLFEQGADVVTRTALKRIN 485

Query: 182  WNSYKINQTQDKIGVFVSIVSTKIPFKGTGKEYIGDDISEIASAVKTAIQQCCNQLKSKI 361
            WNSYKINQTQDKIGVFVSIVSTKIPFKGTGKEYIGDDISEIA+AVK+AIQQCC QLKSKI
Sbjct: 486  WNSYKINQTQDKIGVFVSIVSTKIPFKGTGKEYIGDDISEIATAVKSAIQQCCIQLKSKI 545

Query: 362  VKRIQAREQQERKRSLNKYIPNATGAIYEVLKEMSRSHSSKKPRCEGKDAELLKQVSARV 541
            VKR+QAREQQERKRSL++YIP+ATGA+YEVLK+M+  H +K+ R   +D  +L +VS ++
Sbjct: 546  VKRLQAREQQERKRSLSRYIPDATGAVYEVLKQMTEEHKTKRKRYGEEDIVMLDKVSKQI 605

Query: 542  VTEETLRVKLAQHVEQVDYEMALEYATQRGVNEQPREDIYIAPLE-NEYNFTEFCSPVFV 718
            +T+ETL+ KLA+HVEQVDYEMALEYATQ GV+E+PRE+IY+  L+ N+ NF +  SP FV
Sbjct: 606  ITKETLKEKLAEHVEQVDYEMALEYATQSGVSEEPRENIYLQHLDPNKSNFIDLHSPTFV 665

Query: 719  FRLI 730
            FRL+
Sbjct: 666  FRLM 669


>ref|XP_004142138.1| PREDICTED: DNA topoisomerase 6 subunit B-like [Cucumis sativus]
            gi|449525918|ref|XP_004169963.1| PREDICTED: DNA
            topoisomerase 6 subunit B-like [Cucumis sativus]
          Length = 696

 Score =  375 bits (962), Expect = e-102
 Identities = 186/239 (77%), Positives = 217/239 (90%)
 Frame = +2

Query: 14   SPQVFEGHPFIVEAGLSLGGKDVKHGLNIFRFANRIPLLFEQGADVVTRTAIKRINWNSY 193
            S QVFEGHPFIVEAG+S+GGKDVK GLNIFRFANRIPLLFEQGADVVTRTA+KRINWNSY
Sbjct: 457  SAQVFEGHPFIVEAGVSIGGKDVKQGLNIFRFANRIPLLFEQGADVVTRTALKRINWNSY 516

Query: 194  KINQTQDKIGVFVSIVSTKIPFKGTGKEYIGDDISEIASAVKTAIQQCCNQLKSKIVKRI 373
            KINQ QDKIGVFVSIVSTKIPFKGTGKEYIGDDISEIASAVK+AIQQCC QLKSKIVK+I
Sbjct: 517  KINQAQDKIGVFVSIVSTKIPFKGTGKEYIGDDISEIASAVKSAIQQCCIQLKSKIVKKI 576

Query: 374  QAREQQERKRSLNKYIPNATGAIYEVLKEMSRSHSSKKPRCEGKDAELLKQVSARVVTEE 553
            QAREQQERKR+L++YIP+AT A+Y VLKEM++ H+SKK R + +DAE+L +VSAR++T E
Sbjct: 577  QAREQQERKRNLSRYIPDATNAVYNVLKEMAQVHASKKKRHDCEDAEILSKVSARLITNE 636

Query: 554  TLRVKLAQHVEQVDYEMALEYATQRGVNEQPREDIYIAPLENEYNFTEFCSPVFVFRLI 730
            TLR KLAQHVEQVD+EMA+EYATQ G + + +E++YI  L+  ++FT+F SP+FVFRLI
Sbjct: 637  TLRDKLAQHVEQVDHEMAMEYATQSGASAEAKEEMYIQSLDATHSFTDFQSPLFVFRLI 695


>dbj|BAB02486.1| DNA topoisomerase VI subunit B-like protein [Arabidopsis thaliana]
          Length = 694

 Score =  370 bits (951), Expect = e-100
 Identities = 184/240 (76%), Positives = 216/240 (90%), Gaps = 1/240 (0%)
 Frame = +2

Query: 14   SPQVFEGHPFIVEAGLSLGGKDVKHGLNIFRFANRIPLLFEQGADVVTRTAIKRINWNSY 193
            S QVFEGHPFIVEAG+SLGG+DVK G+NIFRFANRIPLLFEQGADVVTRTA+KRINWNSY
Sbjct: 454  SAQVFEGHPFIVEAGVSLGGRDVKQGINIFRFANRIPLLFEQGADVVTRTALKRINWNSY 513

Query: 194  KINQTQDKIGVFVSIVSTKIPFKGTGKEYIGDDISEIASAVKTAIQQCCNQLKSKIVKRI 373
            KINQTQDKIGVFVSIVSTKIPFKGTGKEYIGDDISEIA+AVK+AIQQCC QLKSKIVKR+
Sbjct: 514  KINQTQDKIGVFVSIVSTKIPFKGTGKEYIGDDISEIATAVKSAIQQCCIQLKSKIVKRL 573

Query: 374  QAREQQERKRSLNKYIPNATGAIYEVLKEMSRSHSSKKPRCEGKDAELLKQVSARVVTEE 553
            QAREQQERKRSL++YIP+ATGA+YEVLK+M+  H +K+ R   +D  +L +VS +++T+E
Sbjct: 574  QAREQQERKRSLSRYIPDATGAVYEVLKQMTEEHKTKRKRYGEEDIVMLDKVSKQIITKE 633

Query: 554  TLRVKLAQHVEQVDYEMALEYATQRGVNEQPREDIYIAPLE-NEYNFTEFCSPVFVFRLI 730
            TL+ KLA+HVEQVDYEMALEYATQ GV+E+PRE+IY+  L+ N+ NF +  SP FVFRL+
Sbjct: 634  TLKEKLAEHVEQVDYEMALEYATQSGVSEEPRENIYLQHLDPNKSNFIDLHSPTFVFRLM 693


>ref|XP_002885404.1| hypothetical protein ARALYDRAFT_318827 [Arabidopsis lyrata subsp.
            lyrata] gi|297331244|gb|EFH61663.1| hypothetical protein
            ARALYDRAFT_318827 [Arabidopsis lyrata subsp. lyrata]
          Length = 691

 Score =  361 bits (927), Expect = 1e-97
 Identities = 182/240 (75%), Positives = 214/240 (89%), Gaps = 1/240 (0%)
 Frame = +2

Query: 14   SPQVFEGHPFIVEAGLSLGGKDVKHGLNIFRFANRIPLLFEQGADVVTRTAIKRINWNSY 193
            S QVFEGHPFIVEAG+SLGG+D   G+NIFRFANRIPLLFEQGADVVTRTA+KRINWNSY
Sbjct: 454  SAQVFEGHPFIVEAGVSLGGRD---GINIFRFANRIPLLFEQGADVVTRTALKRINWNSY 510

Query: 194  KINQTQDKIGVFVSIVSTKIPFKGTGKEYIGDDISEIASAVKTAIQQCCNQLKSKIVKRI 373
            KINQTQDKIGVFVSIVSTKIPFKGTGKEYIGDDISEIA+AVK+AIQQCC QLKSKIVKR+
Sbjct: 511  KINQTQDKIGVFVSIVSTKIPFKGTGKEYIGDDISEIATAVKSAIQQCCIQLKSKIVKRL 570

Query: 374  QAREQQERKRSLNKYIPNATGAIYEVLKEMSRSHSSKKPRCEGKDAELLKQVSARVVTEE 553
            QAREQQERKRSL++YIP+ATGA+YEVLK+M+  H++K+ R   +D  +L +VS  ++T+E
Sbjct: 571  QAREQQERKRSLSRYIPDATGAVYEVLKQMTEEHTTKRKRYGEEDTVMLNKVSKHIITKE 630

Query: 554  TLRVKLAQHVEQVDYEMALEYATQRGVNEQPREDIYIAPLE-NEYNFTEFCSPVFVFRLI 730
            TL+ KLA+HVEQVDYEMALEYATQ GV+E+PRE+IY+  L+ N+ NF +  SP FVFRL+
Sbjct: 631  TLKEKLAEHVEQVDYEMALEYATQSGVSEEPRENIYLQHLDPNKSNFIDLHSPNFVFRLM 690