BLASTX nr result

ID: Scutellaria24_contig00008512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00008512
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307065.1| predicted protein [Populus trichocarpa] gi|2...   143   2e-32
ref|NP_680156.2| regulator of chromosome condensation repeat-con...   142   4e-32
ref|XP_002873378.1| hypothetical protein ARALYDRAFT_487713 [Arab...   139   2e-31
ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein lig...   138   4e-31
ref|XP_003523201.1| PREDICTED: probable E3 ubiquitin-protein lig...   137   7e-31

>ref|XP_002307065.1| predicted protein [Populus trichocarpa] gi|222856514|gb|EEE94061.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score =  143 bits (360), Expect = 2e-32
 Identities = 63/88 (71%), Positives = 71/88 (80%)
 Frame = +3

Query: 9   KWGFGKVKSATTPSTISTLPCSEEVACGAYHTCIITNGGELYTWGSNENGCLGIGCTDIT 188
           K  FG   +ATTPS I  LP S+EVACG YHTC+IT+GGELYTWGSNENGCLG G  D+ 
Sbjct: 263 KLAFGDANNATTPSMIGKLPYSQEVACGGYHTCVITSGGELYTWGSNENGCLGNGSIDVL 322

Query: 189 YSPERVQGPFLKQPVSKVSCGWKHTAAI 272
           + PERV+GPFL+ PV KVSCGWKHTAAI
Sbjct: 323 HIPERVEGPFLRSPVEKVSCGWKHTAAI 350


>ref|NP_680156.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana] gi|26452773|dbj|BAC43467.1|
           unknown protein [Arabidopsis thaliana]
           gi|28973187|gb|AAO63918.1| putative UVB-resistance
           protein UVR8 [Arabidopsis thaliana]
           gi|332003957|gb|AED91340.1| regulator of chromosome
           condensation repeat-containing protein [Arabidopsis
           thaliana]
          Length = 434

 Score =  142 bits (357), Expect = 4e-32
 Identities = 62/90 (68%), Positives = 75/90 (83%)
 Frame = +3

Query: 3   LGKWGFGKVKSATTPSTISTLPCSEEVACGAYHTCIITNGGELYTWGSNENGCLGIGCTD 182
           + K GFG V++ATTPS IS +P +EEVACG YHTC++T GGELYTWGSNENGCLG   T 
Sbjct: 278 INKMGFGGVRNATTPSIISEVPYAEEVACGGYHTCVVTRGGELYTWGSNENGCLGTDSTY 337

Query: 183 ITYSPERVQGPFLKQPVSKVSCGWKHTAAI 272
           +++SP RV+GPFL+  VS+VSCGWKHTAAI
Sbjct: 338 VSHSPVRVEGPFLESTVSQVSCGWKHTAAI 367


>ref|XP_002873378.1| hypothetical protein ARALYDRAFT_487713 [Arabidopsis lyrata subsp.
           lyrata] gi|297319215|gb|EFH49637.1| hypothetical protein
           ARALYDRAFT_487713 [Arabidopsis lyrata subsp. lyrata]
          Length = 434

 Score =  139 bits (350), Expect = 2e-31
 Identities = 61/90 (67%), Positives = 74/90 (82%)
 Frame = +3

Query: 3   LGKWGFGKVKSATTPSTISTLPCSEEVACGAYHTCIITNGGELYTWGSNENGCLGIGCTD 182
           + K GFG V++ATTPS IS +P +E VACG YHTC++T GGELYTWGSNENGCLG   T 
Sbjct: 278 INKMGFGGVRNATTPSIISEVPYAEGVACGGYHTCVVTRGGELYTWGSNENGCLGTDSTY 337

Query: 183 ITYSPERVQGPFLKQPVSKVSCGWKHTAAI 272
           +++SP RV+GPFL+  VS+VSCGWKHTAAI
Sbjct: 338 VSHSPVRVEGPFLESTVSQVSCGWKHTAAI 367


>ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cucumis
           sativus]
          Length = 481

 Score =  138 bits (348), Expect = 4e-31
 Identities = 61/85 (71%), Positives = 70/85 (82%)
 Frame = +3

Query: 18  FGKVKSATTPSTISTLPCSEEVACGAYHTCIITNGGELYTWGSNENGCLGIGCTDITYSP 197
           FG+   ATTPS ISTL   EEVACG YHTC++T GG+LY+WGSNENGCLG G T +++ P
Sbjct: 330 FGEANKATTPSLISTLLDCEEVACGGYHTCVLTKGGDLYSWGSNENGCLGNGSTSVSHLP 389

Query: 198 ERVQGPFLKQPVSKVSCGWKHTAAI 272
           ERV+GPF K PVSKVSCGWKHTAAI
Sbjct: 390 ERVEGPFSKSPVSKVSCGWKHTAAI 414


>ref|XP_003523201.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 417

 Score =  137 bits (346), Expect = 7e-31
 Identities = 60/83 (72%), Positives = 70/83 (84%)
 Frame = +3

Query: 24  KVKSATTPSTISTLPCSEEVACGAYHTCIITNGGELYTWGSNENGCLGIGCTDITYSPER 203
           ++  AT PS IS LP S+EVACG YHTC++TN GELYTWGSNENGCLGIG +D+ + PE+
Sbjct: 268 EMSDATKPSLISELPSSKEVACGGYHTCVLTNSGELYTWGSNENGCLGIGSSDVIHLPEK 327

Query: 204 VQGPFLKQPVSKVSCGWKHTAAI 272
           VQGPFLK  VS+VSCGWKHTAAI
Sbjct: 328 VQGPFLKSSVSQVSCGWKHTAAI 350


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