BLASTX nr result

ID: Scutellaria24_contig00008432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00008432
         (1460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149294.1| PREDICTED: cytochrome c-type biogenesis ccda...   426   e-117
ref|XP_002330394.1| predicted protein [Populus trichocarpa] gi|2...   425   e-116
ref|XP_002531046.1| Thiol:disulfide interchange protein dsbD pre...   422   e-115
ref|XP_002284546.1| PREDICTED: cytochrome c-type biogenesis ccda...   419   e-114
ref|NP_001240262.1| cytochrome c-type biogenesis ccda-like chlor...   412   e-112

>ref|XP_004149294.1| PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic
            protein 2-like [Cucumis sativus]
            gi|449528927|ref|XP_004171453.1| PREDICTED: cytochrome
            c-type biogenesis ccda-like chloroplastic protein 2-like
            [Cucumis sativus]
          Length = 362

 Score =  426 bits (1095), Expect = e-117
 Identities = 222/325 (68%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
 Frame = -2

Query: 1354 GKEQLAFLKCENVD-VENFNSISLSKSSRIDLTGALLHSFXXXXXXXXXXXXASTMETMV 1178
            G + +A  +C++++ V+N NS +  ++       A +++             A T++ M 
Sbjct: 44   GTQSVADDQCKHIELVKNRNSRNYFQAM------AFVNAISATSFLAVDAAKAETLKHMW 97

Query: 1177 KMPDALYMLADGSTGDWLSGLLYLSGQQANVAVQDQLSALSFTSLSVIFGAGLVTSLSPC 998
            +   ++Y LADG  GDW  G+LY +GQQANVAVQDQLSALSFTSL+VIFGAG VTSLSPC
Sbjct: 98   EGAASVYTLADGGMGDWFGGILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPC 157

Query: 997  TLSVLPLTLGYIGAFGSGKSKTEVIGNSLSFAMXXXXXXXXXXXXASFAGKAYGQIGQGL 818
            TLSVLPLTLGYIGAFGSGKSK EV+GNS++F++            ASFAGKAYGQIGQGL
Sbjct: 158  TLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGL 217

Query: 817  PVAASSLAIVMGLNLLQVIELQLPSFFDNFDPRAAAASFPSSIQAYLAGLTFALAASPCS 638
            P+AAS LA++MGLNLL++IELQLPSFF+NFDPR+AAA+FPSS+QAYLAGLTFALAASPCS
Sbjct: 218  PLAASGLAVIMGLNLLEIIELQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCS 277

Query: 637  TPVLATLLGYVASTKDPLVGGSLLLTYTTGYVAPLLLAASFAGAMQSLLSFRKFSAWINP 458
            TPVLATLLGYVA++KDP++GGSLLLTYTTGYV PLLLAASFAGA+QSLLSFRKFS+WINP
Sbjct: 278  TPVLATLLGYVATSKDPIIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINP 337

Query: 457  MSGALLLGGGMYTLLDRLFPVTMAM 383
            +SGALLLGGG+YT LDRLFPVTMAM
Sbjct: 338  ISGALLLGGGLYTFLDRLFPVTMAM 362


>ref|XP_002330394.1| predicted protein [Populus trichocarpa] gi|222871779|gb|EEF08910.1|
            predicted protein [Populus trichocarpa]
          Length = 265

 Score =  425 bits (1093), Expect = e-116
 Identities = 215/261 (82%), Positives = 237/261 (90%)
 Frame = -2

Query: 1165 ALYMLADGSTGDWLSGLLYLSGQQANVAVQDQLSALSFTSLSVIFGAGLVTSLSPCTLSV 986
            ++Y LADGS GDW  G LY SGQQAN AVQDQLSALSFTSL+VIFGAGLVTSLSPCTLSV
Sbjct: 5    SVYTLADGSIGDWFGGFLYSSGQQANEAVQDQLSALSFTSLAVIFGAGLVTSLSPCTLSV 64

Query: 985  LPLTLGYIGAFGSGKSKTEVIGNSLSFAMXXXXXXXXXXXXASFAGKAYGQIGQGLPVAA 806
            LPLTLGYIGAFGSGKS+ E++G+S++FA+            ASFAGK YGQIGQGLP+AA
Sbjct: 65   LPLTLGYIGAFGSGKSRAEIVGDSIAFALGLATTLALLGIAASFAGKTYGQIGQGLPLAA 124

Query: 805  SSLAIVMGLNLLQVIELQLPSFFDNFDPRAAAASFPSSIQAYLAGLTFALAASPCSTPVL 626
            S LA++MGLNLL+VIELQLPSFF+NFDPRAAAA+FPSS+QAYLAGLTFALAASPCSTPVL
Sbjct: 125  SGLAVIMGLNLLEVIELQLPSFFNNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVL 184

Query: 625  ATLLGYVASTKDPLVGGSLLLTYTTGYVAPLLLAASFAGAMQSLLSFRKFSAWINPMSGA 446
            ATLLGYVA++KDP+VGGSLLLTYTTGYVAPLLLAASFAGA+QSLLSFRKFSAWINPMSGA
Sbjct: 185  ATLLGYVAASKDPVVGGSLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINPMSGA 244

Query: 445  LLLGGGMYTLLDRLFPVTMAM 383
            LLLGGG+YT LDRLFP TMAM
Sbjct: 245  LLLGGGVYTFLDRLFPPTMAM 265


>ref|XP_002531046.1| Thiol:disulfide interchange protein dsbD precursor, putative [Ricinus
            communis] gi|223529374|gb|EEF31339.1| Thiol:disulfide
            interchange protein dsbD precursor, putative [Ricinus
            communis]
          Length = 350

 Score =  422 bits (1085), Expect = e-115
 Identities = 229/331 (69%), Positives = 259/331 (78%), Gaps = 5/331 (1%)
 Frame = -2

Query: 1360 NHGKEQLAFLKCENVDVENFNSISLSK-----SSRIDLTGALLHSFXXXXXXXXXXXXAS 1196
            NH KE+         +    N +SLSK     SSRI      L                S
Sbjct: 22   NHSKEKATGKLSSTNENLRRNVLSLSKNDSRCSSRIKTIATSLA--VSNLINIDAAKAVS 79

Query: 1195 TMETMVKMPDALYMLADGSTGDWLSGLLYLSGQQANVAVQDQLSALSFTSLSVIFGAGLV 1016
            T + + +    +Y LADG  GDWL  LLY +GQQAN AVQDQLSALSFTSL+VIFGAGLV
Sbjct: 80   TDKLLEEATIYMYTLADGGIGDWLGRLLYSAGQQANEAVQDQLSALSFTSLAVIFGAGLV 139

Query: 1015 TSLSPCTLSVLPLTLGYIGAFGSGKSKTEVIGNSLSFAMXXXXXXXXXXXXASFAGKAYG 836
            TSLSPCTLSVLPLTLGYIGAFGSGKS+ EV+ +S++FA+            ASFAGKAYG
Sbjct: 140  TSLSPCTLSVLPLTLGYIGAFGSGKSRAEVVADSIAFALGLATTLALLGIGASFAGKAYG 199

Query: 835  QIGQGLPVAASSLAIVMGLNLLQVIELQLPSFFDNFDPRAAAASFPSSIQAYLAGLTFAL 656
            QIGQGLP+AAS LA++MGLNLL++IELQLPSFF+NFDPRAAAA+FPSS+QAYLAGLTFAL
Sbjct: 200  QIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFNNFDPRAAAANFPSSVQAYLAGLTFAL 259

Query: 655  AASPCSTPVLATLLGYVASTKDPLVGGSLLLTYTTGYVAPLLLAASFAGAMQSLLSFRKF 476
            AASPCSTPVLATLLGYVA++KDP+VGGSLLLTYTTGYVAPLLLAASFAGA+QSLLSFRKF
Sbjct: 260  AASPCSTPVLATLLGYVAASKDPIVGGSLLLTYTTGYVAPLLLAASFAGALQSLLSFRKF 319

Query: 475  SAWINPMSGALLLGGGMYTLLDRLFPVTMAM 383
            SAWINPMSGALLLGGG+YT LDRLFPV+M+M
Sbjct: 320  SAWINPMSGALLLGGGVYTFLDRLFPVSMSM 350


>ref|XP_002284546.1| PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic
            protein 2 [Vitis vinifera] gi|302143076|emb|CBI20371.3|
            unnamed protein product [Vitis vinifera]
          Length = 358

 Score =  419 bits (1076), Expect = e-114
 Identities = 210/261 (80%), Positives = 235/261 (90%)
 Frame = -2

Query: 1165 ALYMLADGSTGDWLSGLLYLSGQQANVAVQDQLSALSFTSLSVIFGAGLVTSLSPCTLSV 986
            ++Y LADGS GDW  G LY +GQQAN AVQDQLSALSFTSL+VIFGAGLVTSLSPCTLSV
Sbjct: 98   SVYTLADGSIGDWFGGFLYSAGQQANAAVQDQLSALSFTSLAVIFGAGLVTSLSPCTLSV 157

Query: 985  LPLTLGYIGAFGSGKSKTEVIGNSLSFAMXXXXXXXXXXXXASFAGKAYGQIGQGLPVAA 806
            LPLTLGYIGAFGSGK + EVIGNS++F++            ASFAGKAYGQIGQGLP+AA
Sbjct: 158  LPLTLGYIGAFGSGKGRAEVIGNSVAFSLGLATTLAILGVAASFAGKAYGQIGQGLPLAA 217

Query: 805  SSLAIVMGLNLLQVIELQLPSFFDNFDPRAAAASFPSSIQAYLAGLTFALAASPCSTPVL 626
            S LA++MGLNLL++IELQLPSFF+NFDPR+AAA+ PSS+QAYLAGLTFALAASPCSTPVL
Sbjct: 218  SGLAVIMGLNLLEIIELQLPSFFNNFDPRSAAANLPSSVQAYLAGLTFALAASPCSTPVL 277

Query: 625  ATLLGYVASTKDPLVGGSLLLTYTTGYVAPLLLAASFAGAMQSLLSFRKFSAWINPMSGA 446
            ATLLGYVA++KDP++GGSLLLTYTTGYVAPLLLAASFAGA+QSLLSFRKFSAWINP SGA
Sbjct: 278  ATLLGYVATSKDPVIGGSLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINPTSGA 337

Query: 445  LLLGGGMYTLLDRLFPVTMAM 383
            LLLGGG+YTLLDRLFP +M M
Sbjct: 338  LLLGGGIYTLLDRLFPTSMVM 358


>ref|NP_001240262.1| cytochrome c-type biogenesis ccda-like chloroplastic protein 2-like
            [Glycine max] gi|32402380|gb|AAP81162.1| c-type
            cytochrome biogenesis protein [Glycine max]
            gi|255636862|gb|ACU18764.1| unknown [Glycine max]
          Length = 344

 Score =  412 bits (1059), Expect = e-112
 Identities = 205/261 (78%), Positives = 236/261 (90%)
 Frame = -2

Query: 1165 ALYMLADGSTGDWLSGLLYLSGQQANVAVQDQLSALSFTSLSVIFGAGLVTSLSPCTLSV 986
            ++Y LADGS  DW  G LY +GQQAN AVQ QL++LSFTSL+VI+GAGLVTSLSPCTLSV
Sbjct: 84   SIYALADGSLNDWFGGFLYSAGQQANEAVQGQLTSLSFTSLAVIYGAGLVTSLSPCTLSV 143

Query: 985  LPLTLGYIGAFGSGKSKTEVIGNSLSFAMXXXXXXXXXXXXASFAGKAYGQIGQGLPVAA 806
            LPLTLGYIGAFGSGKS+ EV+G+S++F++            ASFAGKAYGQIGQGLP+AA
Sbjct: 144  LPLTLGYIGAFGSGKSRAEVVGDSIAFSLGLATTLALLGVGASFAGKAYGQIGQGLPLAA 203

Query: 805  SSLAIVMGLNLLQVIELQLPSFFDNFDPRAAAASFPSSIQAYLAGLTFALAASPCSTPVL 626
            S LAI+MGLNLL++IEL+LPSFFD+FDPRAAAA+FPSS+QAYLAGLTFALAASPCSTPVL
Sbjct: 204  SGLAIIMGLNLLEIIELRLPSFFDSFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVL 263

Query: 625  ATLLGYVASTKDPLVGGSLLLTYTTGYVAPLLLAASFAGAMQSLLSFRKFSAWINPMSGA 446
            ATLLGYVA++KDP++GGSLLLTYTTGYV+PLLLAASFAGA+QSLLSFRKFSAWINP+SGA
Sbjct: 264  ATLLGYVAASKDPVIGGSLLLTYTTGYVSPLLLAASFAGALQSLLSFRKFSAWINPISGA 323

Query: 445  LLLGGGMYTLLDRLFPVTMAM 383
            +LLGGG+YT LDRLFPVTM M
Sbjct: 324  MLLGGGVYTFLDRLFPVTMVM 344


Top