BLASTX nr result

ID: Scutellaria24_contig00008360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00008360
         (1135 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532456.1| RNA binding protein, putative [Ricinus commu...   202   1e-49
ref|XP_003528804.1| PREDICTED: uncharacterized protein LOC100814...   199   1e-48
ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II tra...   197   5e-48
ref|XP_003548527.1| PREDICTED: uncharacterized protein LOC100818...   196   1e-47
ref|XP_002312859.1| predicted protein [Populus trichocarpa] gi|2...   183   6e-44

>ref|XP_002532456.1| RNA binding protein, putative [Ricinus communis]
           gi|223527846|gb|EEF29942.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 221

 Score =  202 bits (515), Expect = 1e-49
 Identities = 93/116 (80%), Positives = 108/116 (93%)
 Frame = +2

Query: 368 MDPDYKKFGRGPRELTGAVDLISHYKLLPHYDFFCKRQLPLSISDTHYLHNVVGDTEIRK 547
           MDP+ KKFG GPRELTGAVDLISH+KL+PH++FFCKR LPLSISDTHYLHNVVGD+EIRK
Sbjct: 1   MDPESKKFGSGPRELTGAVDLISHFKLVPHHEFFCKRSLPLSISDTHYLHNVVGDSEIRK 60

Query: 548 GEGMQLGQLIQDTSLSRETNTRIQPFDLAILREAFQLRETAPVDLPPSEKGTPTVA 715
           G+GMQL QLIQ+TS SR++N RIQPFDL +LREAFQL+ET P+DLPP+EKGTPT+A
Sbjct: 61  GDGMQLDQLIQNTSYSRDSNARIQPFDLDVLREAFQLKETTPIDLPPAEKGTPTIA 116


>ref|XP_003528804.1| PREDICTED: uncharacterized protein LOC100814559 [Glycine max]
          Length = 223

 Score =  199 bits (505), Expect = 1e-48
 Identities = 93/116 (80%), Positives = 106/116 (91%)
 Frame = +2

Query: 368 MDPDYKKFGRGPRELTGAVDLISHYKLLPHYDFFCKRQLPLSISDTHYLHNVVGDTEIRK 547
           MDP+ KKFG GPRELTGAVDLISH+KLLPHY+FFCKR LP+SI+DTHYLHNVVGDTEIRK
Sbjct: 1   MDPEGKKFGGGPRELTGAVDLISHFKLLPHYEFFCKRSLPVSIADTHYLHNVVGDTEIRK 60

Query: 548 GEGMQLGQLIQDTSLSRETNTRIQPFDLAILREAFQLRETAPVDLPPSEKGTPTVA 715
           G+GMQL QLIQ+TS  R+TN RIQPFDL +L+EAFQLRETAP+DLP +EKG PT+A
Sbjct: 61  GDGMQLEQLIQNTSSFRDTNARIQPFDLDVLKEAFQLRETAPIDLPAAEKGIPTIA 116


>ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           19a-like [Cucumis sativus]
           gi|449502064|ref|XP_004161533.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 19a-like
           [Cucumis sativus]
          Length = 219

 Score =  197 bits (500), Expect = 5e-48
 Identities = 95/115 (82%), Positives = 102/115 (88%)
 Frame = +2

Query: 368 MDPDYKKFGRGPRELTGAVDLISHYKLLPHYDFFCKRQLPLSISDTHYLHNVVGDTEIRK 547
           M+ + KKFGRGPRELTGAVDLISHYKLLPH+DFFCK+ LPLSISDTHYLHNVVGDTEIRK
Sbjct: 1   MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRK 60

Query: 548 GEGMQLGQLIQDTSLSRETNTRIQPFDLAILREAFQLRETAPVDLPPSEKGTPTV 712
           GEGMQL QLIQ+TS  RETN RIQPFD  IL EAFQLRET PVDLP +EKG PT+
Sbjct: 61  GEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTI 115


>ref|XP_003548527.1| PREDICTED: uncharacterized protein LOC100818495 [Glycine max]
          Length = 222

 Score =  196 bits (497), Expect = 1e-47
 Identities = 93/116 (80%), Positives = 106/116 (91%)
 Frame = +2

Query: 368 MDPDYKKFGRGPRELTGAVDLISHYKLLPHYDFFCKRQLPLSISDTHYLHNVVGDTEIRK 547
           MDP+ KKFG GPRELTGAVDLISH+KLLPHY+FFCKR LP+SI+DTHYLHNVVGDTEIRK
Sbjct: 1   MDPEGKKFGGGPRELTGAVDLISHFKLLPHYEFFCKRPLPVSIADTHYLHNVVGDTEIRK 60

Query: 548 GEGMQLGQLIQDTSLSRETNTRIQPFDLAILREAFQLRETAPVDLPPSEKGTPTVA 715
           G+GMQL QLIQ+TS  R+TN RIQPFDL +L+EAFQLRETAP+DLP +EKG PT+A
Sbjct: 61  GDGMQLDQLIQNTSF-RDTNARIQPFDLDVLKEAFQLRETAPIDLPAAEKGIPTIA 115


>ref|XP_002312859.1| predicted protein [Populus trichocarpa] gi|222849267|gb|EEE86814.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  183 bits (465), Expect = 6e-44
 Identities = 87/106 (82%), Positives = 98/106 (92%)
 Frame = +2

Query: 398 GPRELTGAVDLISHYKLLPHYDFFCKRQLPLSISDTHYLHNVVGDTEIRKGEGMQLGQLI 577
           GPRELTGAVDLISHYKLLPHY++FCKR LPLSI+DTHYLHNVVGDTEIRKGEGMQL QLI
Sbjct: 10  GPRELTGAVDLISHYKLLPHYEYFCKRSLPLSIADTHYLHNVVGDTEIRKGEGMQLDQLI 69

Query: 578 QDTSLSRETNTRIQPFDLAILREAFQLRETAPVDLPPSEKGTPTVA 715
           Q+T  SR++N RIQPFDL +LREAFQL+ET P+DLP +EKGTPT+A
Sbjct: 70  QNT--SRDSNARIQPFDLNVLREAFQLKETTPIDLPSAEKGTPTIA 113


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