BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00008353
         (1456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26363.3| unnamed protein product [Vitis vinifera]              137   9e-30
ref|XP_002284221.1| PREDICTED: DNA-directed RNA polymerase II su...   137   9e-30
ref|XP_002314653.1| predicted protein [Populus trichocarpa] gi|2...   131   5e-28
ref|XP_004150402.1| PREDICTED: DNA-directed RNA polymerase II su...   130   1e-27
ref|XP_002522607.1| DNA-directed RNA polymerase II 19 kD polypep...   129   1e-27

>emb|CBI26363.3| unnamed protein product [Vitis vinifera]
          Length = 242

 Score =  137 bits (344), Expect = 9e-30
 Identities = 73/167 (43%), Positives = 102/167 (61%), Gaps = 1/167 (0%)
 Frame = +2

Query: 170 YKVVFPVKNMNKNDEVLASVIVNRLLKQLSNVKAC-ECGYLLGVTKLISIGRGDDKFSSQ 346
           + V+ P + ++    +L   I+ RLL   SN KA  E GY L VT L +IG G  +  S 
Sbjct: 74  WNVIIPAECLDAKGLMLQRSIIIRLLDAFSNKKATQELGYFLAVTTLENIGEGKVRQHSG 133

Query: 347 HVIFPVDFCCQIFKPVDGEVMTGIVHKICDHGVFLKSGPMNMVYLSSRLMPNYHYVPGES 526
            V+FPV F C  FK   GE++ G+VHK+  HGV L+ GP+  +YLS + MP+Y YVPGE+
Sbjct: 134 DVLFPVVFSCVTFKLFRGEILDGVVHKVLKHGVILRCGPVENIYLSCQKMPDYRYVPGEN 193

Query: 527 RSFVRDDLSKIEIGVVLRYVVYAVRWKQDRLREFRVLASINADGLGP 667
             F+ + LSKIE  VV+R++V   +W +   REF+ L S+  D LGP
Sbjct: 194 PVFLNEKLSKIEKDVVVRFIVMGTKWLEAE-REFQALVSLEGDYLGP 239


>ref|XP_002284221.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Vitis
           vinifera] gi|147822056|emb|CAN61549.1| hypothetical
           protein VITISV_043525 [Vitis vinifera]
          Length = 177

 Score =  137 bits (344), Expect = 9e-30
 Identities = 73/167 (43%), Positives = 102/167 (61%), Gaps = 1/167 (0%)
 Frame = +2

Query: 170 YKVVFPVKNMNKNDEVLASVIVNRLLKQLSNVKAC-ECGYLLGVTKLISIGRGDDKFSSQ 346
           + V+ P + ++    +L   I+ RLL   SN KA  E GY L VT L +IG G  +  S 
Sbjct: 9   WNVIIPAECLDAKGLMLQRSIIIRLLDAFSNKKATQELGYFLAVTTLENIGEGKVRQHSG 68

Query: 347 HVIFPVDFCCQIFKPVDGEVMTGIVHKICDHGVFLKSGPMNMVYLSSRLMPNYHYVPGES 526
            V+FPV F C  FK   GE++ G+VHK+  HGV L+ GP+  +YLS + MP+Y YVPGE+
Sbjct: 69  DVLFPVVFSCVTFKLFRGEILDGVVHKVLKHGVILRCGPVENIYLSCQKMPDYRYVPGEN 128

Query: 527 RSFVRDDLSKIEIGVVLRYVVYAVRWKQDRLREFRVLASINADGLGP 667
             F+ + LSKIE  VV+R++V   +W +   REF+ L S+  D LGP
Sbjct: 129 PVFLNEKLSKIEKDVVVRFIVMGTKWLEAE-REFQALVSLEGDYLGP 174


>ref|XP_002314653.1| predicted protein [Populus trichocarpa] gi|222863693|gb|EEF00824.1|
           predicted protein [Populus trichocarpa]
          Length = 189

 Score =  131 bits (329), Expect = 5e-28
 Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 4/163 (2%)
 Frame = +2

Query: 191 KNMNKNDEVLASVIVNRLLKQLSNVKAC-ECGYLLGVTKLISIGRGDDKFSSQHVIFPVD 367
           +N+++N  V    IV  LLK L ++KA  + GY L VT L SIG+G+    S  V+F V+
Sbjct: 16  ENLDRNGLVPQRSIVTHLLKDLLSMKASKDHGYFLAVTNLKSIGKGEVVNKSGDVLFHVE 75

Query: 368 FCCQIFKPVDGEVMTGIVHKICDHGVFLKSGPMNMVYLSSRLMPNYHYVPGESRSFVRDD 547
           F C+ F P+ GE++ G+VH+   HGV L+ GP+  ++LS+R MPNY Y   E+  F+ D+
Sbjct: 76  FKCRTFMPMKGEILQGVVHRTFRHGVLLRCGPVKYIFLSARKMPNYQYTSEENPVFLNDE 135

Query: 548 LSKIEIGVVLRYVVYAVRWKQ---DRLREFRVLASINADGLGP 667
           L++IE  V++R+ V  VRW +   D  R+F +LAS+  D LGP
Sbjct: 136 LARIENNVLVRFSVLDVRWIEKMWDMRRDFMMLASLVGDSLGP 178


>ref|XP_004150402.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
           [Cucumis sativus] gi|449522228|ref|XP_004168129.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB7-like [Cucumis sativus]
          Length = 175

 Score =  130 bits (326), Expect = 1e-27
 Identities = 71/167 (42%), Positives = 102/167 (61%), Gaps = 1/167 (0%)
 Frame = +2

Query: 170 YKVVFPVKNMNKNDEVLASVIVNRLLKQLSNVKAC-ECGYLLGVTKLISIGRGDDKFSSQ 346
           + V+ P +N++    +L   I+ RLL + +  KA  + GY L VT L +IG G  + +  
Sbjct: 9   WNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGD 68

Query: 347 HVIFPVDFCCQIFKPVDGEVMTGIVHKICDHGVFLKSGPMNMVYLSSRLMPNYHYVPGES 526
            V+FPV F    FK   GE++ G+VHK+  HGVFL+ GP+  +YLS   MP+Y YVPGE+
Sbjct: 69  -VLFPVIFSGITFKLYRGEILEGVVHKVLKHGVFLRCGPVENIYLSYLKMPDYRYVPGEN 127

Query: 527 RSFVRDDLSKIEIGVVLRYVVYAVRWKQDRLREFRVLASINADGLGP 667
             F+ D LSKIE  VV+R++V   +W +   REF+ L S+  D LGP
Sbjct: 128 PVFLNDKLSKIEKDVVVRFIVIGTKWLEAE-REFQALVSLEGDYLGP 173


>ref|XP_002522607.1| DNA-directed RNA polymerase II 19 kD polypeptide rpb7, putative
           [Ricinus communis] gi|223538083|gb|EEF39694.1|
           DNA-directed RNA polymerase II 19 kD polypeptide rpb7,
           putative [Ricinus communis]
          Length = 176

 Score =  129 bits (325), Expect = 1e-27
 Identities = 69/167 (41%), Positives = 102/167 (61%), Gaps = 1/167 (0%)
 Frame = +2

Query: 170 YKVVFPVKNMNKNDEVLASVIVNRLLKQLSNVKAC-ECGYLLGVTKLISIGRGDDKFSSQ 346
           + V+   ++++    +L   I+ RLL+  ++ KA  + GY L VT L SIG G  +  + 
Sbjct: 9   WNVIISAEHLDAKGLMLQRSIIIRLLEDFASKKATKDLGYYLAVTTLESIGEGKVREHTG 68

Query: 347 HVIFPVDFCCQIFKPVDGEVMTGIVHKICDHGVFLKSGPMNMVYLSSRLMPNYHYVPGES 526
            V+FPV F    FK   GE++ G+VHK+  HGVF++ GP+  +YLS   MP+YHYVPGE+
Sbjct: 69  DVLFPVVFNGITFKIFRGEILEGVVHKVLKHGVFIRCGPIENIYLSCMKMPDYHYVPGEN 128

Query: 527 RSFVRDDLSKIEIGVVLRYVVYAVRWKQDRLREFRVLASINADGLGP 667
             F+ D  SKIE  VV+R++V   +W +   REF+ L S+  D LGP
Sbjct: 129 PVFLNDKTSKIEKDVVVRFIVIGTKWLEAE-REFQALVSLEGDYLGP 174