BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00008000
         (2814 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB86267.1| DNA binding protein ACBF-like [Solanum tuberosum]      471   e-130
gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]       470   e-130
sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding prot...   468   e-129
ref|NP_001234487.1| DNA-binding protein [Solanum lycopersicum] g...   466   e-128
gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]           466   e-128

>gb|ABB86267.1| DNA binding protein ACBF-like [Solanum tuberosum]
          Length = 372

 Score =  471 bits (1212), Expect = e-130
 Identities = 234/309 (75%), Positives = 267/309 (86%), Gaps = 2/309 (0%)
 Frame = -3

Query: 1363 NAGEDNKTIWIGDLQQWMDEGYLQSCFSQSGEVVSVKIIRNKQTGHSERYGFIEFNSHAA 1184
            N+ EDNKTIWIGDLQQWMDE YL SCFS +GEV+SVKIIRNKQTG SERYGF+EFN+HAA
Sbjct: 27   NSSEDNKTIWIGDLQQWMDENYLHSCFSHAGEVISVKIIRNKQTGQSERYGFVEFNTHAA 86

Query: 1183 AEKVLQSFNGTTMPNTEQPFRLNWAAFSTGDRRPDXXXXXXXXNTGSDLSIFVGDLATDV 1004
            AEKVLQS+NGT MPN EQPFRLNWAAFS G++R +         TGSD SIFVGDLA+DV
Sbjct: 87   AEKVLQSYNGTMMPNAEQPFRLNWAAFSAGEKRAE---------TGSDFSIFVGDLASDV 137

Query: 1003 TDGLLNDTFASRYPSVKGAKVVVDANSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRP 824
            TD +L DTFASR+PSVKGAKVVVDAN+G SKGYGFVRFGDE+ER+RAMTEMNG+YCSSRP
Sbjct: 138  TDTMLRDTFASRFPSVKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGIYCSSRP 197

Query: 823  MRIGVATPKKTSPQQQQYSSQAVVLAGGYA-NGIVPQG-QPESDTYNTTIFVGGLDSDVT 650
            MR+GVATPKK S  QQQ+SSQAV+L+GGYA NG    G Q + D+ NTTIFVGGLDSDVT
Sbjct: 198  MRVGVATPKKPS-AQQQFSSQAVILSGGYASNGSATHGSQSDGDSSNTTIFVGGLDSDVT 256

Query: 649  DDELRQSFAPFGDVLSVKIPAGKGCGFVQFANRSNAEEAIQRLNGTVIGKQTVRLSWGRN 470
            D+ELRQSF  FG+V+SVKIPAGKGCGFVQF++RS+A+EAIQ+L+G +IGKQ VRLSWGR+
Sbjct: 257  DEELRQSFTQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRS 316

Query: 469  MGNKQSRMD 443
              NKQ R D
Sbjct: 317  PANKQMRTD 325


>gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]
          Length = 482

 Score =  470 bits (1210), Expect = e-130
 Identities = 236/309 (76%), Positives = 266/309 (86%), Gaps = 2/309 (0%)
 Frame = -3

Query: 1363 NAGEDNKTIWIGDLQQWMDEGYLQSCFSQSGEVVSVKIIRNKQTGHSERYGFIEFNSHAA 1184
            ++ EDNKTIWIGDLQQWMDE YL SCFSQ+GEV+SVKIIRNKQTG SERYGF+EFN+HAA
Sbjct: 132  SSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAA 191

Query: 1183 AEKVLQSFNGTTMPNTEQPFRLNWAAFSTGDRRPDXXXXXXXXNTGSDLSIFVGDLATDV 1004
            AEKVLQS+NGT MPN EQPFRLNWA FSTG++R +         TGSD SIFVGDLA+DV
Sbjct: 192  AEKVLQSYNGTMMPNAEQPFRLNWAGFSTGEKRAE---------TGSDFSIFVGDLASDV 242

Query: 1003 TDGLLNDTFASRYPSVKGAKVVVDANSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRP 824
            TD +L DTFASRYPS+KGAKVVVDAN+G SKGYGFVRFGDE+ER+RAMTEMNGVYCSSR 
Sbjct: 243  TDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRA 302

Query: 823  MRIGVATPKKTSPQQQQYSSQAVVLAGGYA-NGIVPQG-QPESDTYNTTIFVGGLDSDVT 650
            MRIGVATPKK S  QQQYSSQAV+L+GGYA NG    G Q + D  NTTIFVGGLDSDVT
Sbjct: 303  MRIGVATPKKPS-AQQQYSSQAVILSGGYASNGAATHGSQSDGDASNTTIFVGGLDSDVT 361

Query: 649  DDELRQSFAPFGDVLSVKIPAGKGCGFVQFANRSNAEEAIQRLNGTVIGKQTVRLSWGRN 470
            D+ELRQSF  FG+V+SVKIPAGKGCGFVQF++RS+A+EAIQ+L+G +IGKQ VRLSWGR+
Sbjct: 362  DEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRS 421

Query: 469  MGNKQSRMD 443
              NKQ R D
Sbjct: 422  PANKQMRAD 430


>sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding protein RBP47;
            Short=Poly(A)-binding protein RBP47; AltName:
            Full=RNA-binding protein 47; Short=NplRBP47
            gi|9663769|emb|CAC01238.1| RNA Binding Protein 47
            [Nicotiana plumbaginifolia]
          Length = 428

 Score =  468 bits (1204), Expect = e-129
 Identities = 234/309 (75%), Positives = 267/309 (86%), Gaps = 2/309 (0%)
 Frame = -3

Query: 1363 NAGEDNKTIWIGDLQQWMDEGYLQSCFSQSGEVVSVKIIRNKQTGHSERYGFIEFNSHAA 1184
            ++ EDNKTIWIGDLQQWMDE YL SCFSQ+GEV+SVKIIRNKQTG SERYGF+EFN+HAA
Sbjct: 78   SSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAA 137

Query: 1183 AEKVLQSFNGTTMPNTEQPFRLNWAAFSTGDRRPDXXXXXXXXNTGSDLSIFVGDLATDV 1004
            AEKVLQS+NGT MPNTEQPFRLNWA FSTG++R +         TGSD SIFVGDLA+DV
Sbjct: 138  AEKVLQSYNGTMMPNTEQPFRLNWAGFSTGEKRAE---------TGSDFSIFVGDLASDV 188

Query: 1003 TDGLLNDTFASRYPSVKGAKVVVDANSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRP 824
            TD +L DTFASRYPS+KGAKVVVDAN+G SKGYGFVRFGDE+ER+RAMTEMNGVYCSSR 
Sbjct: 189  TDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRA 248

Query: 823  MRIGVATPKKTSPQQQQYSSQAVVLAGGYA-NGIVPQG-QPESDTYNTTIFVGGLDSDVT 650
            MRIGVATPKK S   +QYSSQAV+L+GGYA NG    G Q + D+ NTTIFVGGLDS+VT
Sbjct: 249  MRIGVATPKKPS-AHEQYSSQAVILSGGYASNGAATHGSQSDGDSSNTTIFVGGLDSEVT 307

Query: 649  DDELRQSFAPFGDVLSVKIPAGKGCGFVQFANRSNAEEAIQRLNGTVIGKQTVRLSWGRN 470
            D+ELRQSF  FG+V+SVKIPAGKGCGFVQF++RS+A+EAIQ+L+G +IGKQ VRLSWGR+
Sbjct: 308  DEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRS 367

Query: 469  MGNKQSRMD 443
              NKQ R D
Sbjct: 368  PANKQMRTD 376


>ref|NP_001234487.1| DNA-binding protein [Solanum lycopersicum] gi|40804404|gb|AAR91698.1|
            DNA-binding protein [Solanum lycopersicum]
          Length = 428

 Score =  466 bits (1200), Expect = e-128
 Identities = 232/309 (75%), Positives = 267/309 (86%), Gaps = 2/309 (0%)
 Frame = -3

Query: 1363 NAGEDNKTIWIGDLQQWMDEGYLQSCFSQSGEVVSVKIIRNKQTGHSERYGFIEFNSHAA 1184
            NA EDN+TIWIGDLQQWMDEGYL +CF+Q+GEV+SVK+IRNKQTG SERYGFIEFN+H A
Sbjct: 73   NASEDNRTIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEA 132

Query: 1183 AEKVLQSFNGTTMPNTEQPFRLNWAAFSTGDRRPDXXXXXXXXNTGSDLSIFVGDLATDV 1004
            AEKVLQS+NGT MPN EQPFRLNW+AFS+G++R D         +GSDLSIFVGDLA+DV
Sbjct: 133  AEKVLQSYNGTMMPNAEQPFRLNWSAFSSGEKRAD---VGAGAGSGSDLSIFVGDLASDV 189

Query: 1003 TDGLLNDTFASRYPSVKGAKVVVDANSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRP 824
            TD +L DTF+SRYPSVKGAKVV+D+N+GRSKGYGFVRF DE+ER+RAMTEMNG+YCSSR 
Sbjct: 190  TDTMLRDTFSSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESERSRAMTEMNGIYCSSRA 249

Query: 823  MRIGVATPKKTSPQQQQYSSQAVVLAGGYA-NGIVPQ-GQPESDTYNTTIFVGGLDSDVT 650
            MRIGVATPKK SP  QQY  QAV+LAGG+A NG   Q  Q +SD  NTT+FVGGLDS+VT
Sbjct: 250  MRIGVATPKKPSP-MQQYFPQAVILAGGHASNGAATQTSQTDSDLSNTTVFVGGLDSEVT 308

Query: 649  DDELRQSFAPFGDVLSVKIPAGKGCGFVQFANRSNAEEAIQRLNGTVIGKQTVRLSWGRN 470
            D+ELRQSF+ FG+V+SVKIPAGKGCGFVQF+ RS AE+AI++LNGTVIG QTVRLSWGRN
Sbjct: 309  DEELRQSFSQFGNVVSVKIPAGKGCGFVQFSERSAAEDAIEKLNGTVIGAQTVRLSWGRN 368

Query: 469  MGNKQSRMD 443
              NKQ R D
Sbjct: 369  PANKQFRTD 377


>gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]
          Length = 428

 Score =  466 bits (1199), Expect = e-128
 Identities = 236/309 (76%), Positives = 265/309 (85%), Gaps = 2/309 (0%)
 Frame = -3

Query: 1363 NAGEDNKTIWIGDLQQWMDEGYLQSCFSQSGEVVSVKIIRNKQTGHSERYGFIEFNSHAA 1184
            ++ EDNKTIWIGDLQQWMDE YL SCFSQ+GEV+SVKIIRNKQTG SERYGF+EFN+HAA
Sbjct: 78   SSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAA 137

Query: 1183 AEKVLQSFNGTTMPNTEQPFRLNWAAFSTGDRRPDXXXXXXXXNTGSDLSIFVGDLATDV 1004
            AEKVLQS+NGT MPN EQPFRLNWA FSTG++R +         TGSD SIFVGDLA+DV
Sbjct: 138  AEKVLQSYNGTMMPNAEQPFRLNWAGFSTGEKRAE---------TGSDFSIFVGDLASDV 188

Query: 1003 TDGLLNDTFASRYPSVKGAKVVVDANSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRP 824
            TD +L DTFASRYPS+KGAKVVVDAN+G SKGYGFVRFGDE+ER+RAMTEMNGVYCSSR 
Sbjct: 189  TDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRA 248

Query: 823  MRIGVATPKKTSPQQQQYSSQAVVLAGGYA-NGIVPQG-QPESDTYNTTIFVGGLDSDVT 650
            MRIGVATPKK S  QQQYSSQAV+L+GGYA NG    G Q + D  NTTIFVGGLDSDVT
Sbjct: 249  MRIGVATPKKPS-AQQQYSSQAVILSGGYASNGAATHGSQSDGDASNTTIFVGGLDSDVT 307

Query: 649  DDELRQSFAPFGDVLSVKIPAGKGCGFVQFANRSNAEEAIQRLNGTVIGKQTVRLSWGRN 470
            D+ELRQSF  FG+V+SVKIPAGKGCGFVQF++RS+A+EAIQ+L+G +IGKQ VRLSWGR 
Sbjct: 308  DEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRT 367

Query: 469  MGNKQSRMD 443
              NKQ R D
Sbjct: 368  -ANKQMRAD 375