BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00007998
         (1125 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA90282.1| U1snRNP-specific protein, U1A [Solanum tuberosum]     325   1e-86
ref|XP_002270967.1| PREDICTED: U1 small nuclear ribonucleoprotei...   314   2e-83
gb|ABK94716.1| unknown [Populus trichocarpa]                          311   2e-82
ref|XP_002302719.1| predicted protein [Populus trichocarpa] gi|2...   309   9e-82
ref|XP_004156835.1| PREDICTED: U1 small nuclear ribonucleoprotei...   308   1e-81

>emb|CAA90282.1| U1snRNP-specific protein, U1A [Solanum tuberosum]
          Length = 253

 Score =  325 bits (834), Expect = 1e-86
 Identities = 168/242 (69%), Positives = 186/242 (76%), Gaps = 3/242 (1%)
 Frame = +2

Query: 113 APTGGAEVASNMTIYINNLNEKIKLDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVV 292
           AP+GG E   N+TIYINNLNEKIKL+ELKKS+HAVFSQFGKILEVLAFKTLKHKGQAWVV
Sbjct: 13  APSGG-ETPPNVTIYINNLNEKIKLEELKKSMHAVFSQFGKILEVLAFKTLKHKGQAWVV 71

Query: 293 FEDVASASNALRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTFAPXXXXXXXXXXXXXXX 472
           FE+V+SASNALRQMQGFPFYDKPMRIQYAKTKSD++AKADGTF P               
Sbjct: 72  FEEVSSASNALRQMQGFPFYDKPMRIQYAKTKSDVVAKADGTFVPREKRKRHEDKGRKKK 131

Query: 473 XXXXANQXXXXXXXXXXXXXXXXXXXSQIPYMG---ARAPEGPAPPNNILFVQNLPHQTN 643
               +NQ                   SQIPYMG   A  PE PAPPN+ILFVQNLPHQ+ 
Sbjct: 132 DQQDSNQAGMGLNPAYAGAYGAAPPFSQIPYMGGAKAAVPEAPAPPNSILFVQNLPHQST 191

Query: 644 SMTLQMLFSQFPGFKEVRMVEAKPGISFVEFENEMQSTVAMQGLQGFKITEDNPMLITYA 823
            M LQMLF Q+PGFKEVRM+EAKPGI+F+E+ +EMQSTVAMQ LQGFKIT +NPMLITYA
Sbjct: 192 PMMLQMLFCQYPGFKEVRMIEAKPGIAFIEYGDEMQSTVAMQALQGFKITAENPMLITYA 251

Query: 824 KK 829
           KK
Sbjct: 252 KK 253


>ref|XP_002270967.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Vitis vinifera]
          Length = 245

 Score =  314 bits (805), Expect = 2e-83
 Identities = 163/239 (68%), Positives = 180/239 (75%), Gaps = 4/239 (1%)
 Frame = +2

Query: 125 GAEVASNMTIYINNLNEKIKLDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVVFEDV 304
           G E++ NMTIYINNLNEKIKL+ELKKSL AVFSQFGKI+EVLAFKTLKHKGQAWVVFE+V
Sbjct: 7   GGEISPNMTIYINNLNEKIKLEELKKSLFAVFSQFGKIMEVLAFKTLKHKGQAWVVFEEV 66

Query: 305 ASASNALRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTFAP-XXXXXXXXXXXXXXXXXX 481
           +SA+NALRQMQGFPFYDKPMRIQYAKTKSD+IAKADGTF P                   
Sbjct: 67  SSATNALRQMQGFPFYDKPMRIQYAKTKSDVIAKADGTFVPRERRRRHDDRAGRKRREQH 126

Query: 482 XANQXXXXXXXXXXXXXXXXXXXSQIPYMG---ARAPEGPAPPNNILFVQNLPHQTNSMT 652
            ANQ                   SQIPY+G   +  PE PAPPNNILF+QNLPH+   M 
Sbjct: 127 DANQAGVGVNPAYGGAYGAAPPLSQIPYLGGAKSAVPEAPAPPNNILFIQNLPHEATPMM 186

Query: 653 LQMLFSQFPGFKEVRMVEAKPGISFVEFENEMQSTVAMQGLQGFKITEDNPMLITYAKK 829
           LQM F Q+PGFKEVRMVEAKPGI+FVE+ +EMQSTVAMQGLQG KI + NPMLITYAKK
Sbjct: 187 LQMFFCQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGLKINQQNPMLITYAKK 245


>gb|ABK94716.1| unknown [Populus trichocarpa]
          Length = 254

 Score =  311 bits (797), Expect = 2e-82
 Identities = 161/238 (67%), Positives = 176/238 (73%), Gaps = 3/238 (1%)
 Frame = +2

Query: 125 GAEVASNMTIYINNLNEKIKLDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVVFEDV 304
           G +V+ NMTIYINNLNEKIK+DELK SLHAVFSQFGKILE+LAFKTLKHKGQAWV+FEDV
Sbjct: 17  GTDVSQNMTIYINNLNEKIKIDELKTSLHAVFSQFGKILEILAFKTLKHKGQAWVIFEDV 76

Query: 305 ASASNALRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTFAPXXXXXXXXXXXXXXXXXXX 484
            SASNA+RQMQ FPFYDKPMRIQYAKTKSDIIAKADGTF P                   
Sbjct: 77  QSASNAIRQMQSFPFYDKPMRIQYAKTKSDIIAKADGTFVPREKRRRHEEKGKKKKDQHD 136

Query: 485 ANQXXXXXXXXXXXXXXXXXXXSQIPYMG---ARAPEGPAPPNNILFVQNLPHQTNSMTL 655
           ANQ                    QIPY G   +  PE PAPPNNILF+QNLP++T  M L
Sbjct: 137 ANQVGVGLTPAYGGAYGTTPSLLQIPYPGGVKSMVPEAPAPPNNILFIQNLPNETTPMML 196

Query: 656 QMLFSQFPGFKEVRMVEAKPGISFVEFENEMQSTVAMQGLQGFKITEDNPMLITYAKK 829
           QMLF Q+PGFKEVRMVEAKPGI+FVE+ +EMQST AM GLQGFKI + N MLITYAKK
Sbjct: 197 QMLFQQYPGFKEVRMVEAKPGIAFVEYGDEMQSTGAMHGLQGFKILQQNSMLITYAKK 254


>ref|XP_002302719.1| predicted protein [Populus trichocarpa] gi|222844445|gb|EEE81992.1|
           predicted protein [Populus trichocarpa]
          Length = 251

 Score =  309 bits (791), Expect = 9e-82
 Identities = 160/238 (67%), Positives = 178/238 (74%), Gaps = 3/238 (1%)
 Frame = +2

Query: 125 GAEVASNMTIYINNLNEKIKLDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVVFEDV 304
           G EV+SNMTIYINNLNEKIK+DELKK+LHAVFSQFGKILE+LAFKTLKHKGQAWVVFEDV
Sbjct: 15  GTEVSSNMTIYINNLNEKIKIDELKKALHAVFSQFGKILEILAFKTLKHKGQAWVVFEDV 74

Query: 305 ASASNALRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTFAPXXXXXXXXXXXXXXXXXXX 484
            SASNA+RQMQ FPFYDKPMRIQYAKTKSDI+AKADGTF P                   
Sbjct: 75  QSASNAMRQMQSFPFYDKPMRIQYAKTKSDIVAKADGTFVPREKRRRHEEKGKKKKDQHD 134

Query: 485 ANQXXXXXXXXXXXXXXXXXXXSQIPYMG---ARAPEGPAPPNNILFVQNLPHQTNSMTL 655
            NQ                   SQIPY+G   +  PE PAPPNNILF+QNLP++T +M L
Sbjct: 135 TNQVGVGLTPAYGGAYGTTPPLSQIPYLGGVKSMVPEAPAPPNNILFIQNLPNETTTMML 194

Query: 656 QMLFSQFPGFKEVRMVEAKPGISFVEFENEMQSTVAMQGLQGFKITEDNPMLITYAKK 829
           QMLF Q+ GFKEVRMVE KPGI+FVE+ +EMQSTVAM  LQGFK+ + N MLITYAKK
Sbjct: 195 QMLFQQYAGFKEVRMVETKPGIAFVEYGDEMQSTVAMHALQGFKL-QQNSMLITYAKK 251


>ref|XP_004156835.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
           sativus]
          Length = 242

 Score =  308 bits (790), Expect = 1e-81
 Identities = 163/238 (68%), Positives = 179/238 (75%), Gaps = 1/238 (0%)
 Frame = +2

Query: 119 TGGAEVASNMTIYINNLNEKIKLDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVVFE 298
           T G EV  NMTIYINNLNEKIKL+ELKKSL+AVFSQFGKILEVLAFKTLKHKGQAWVVFE
Sbjct: 6   TTGNEVPPNMTIYINNLNEKIKLEELKKSLNAVFSQFGKILEVLAFKTLKHKGQAWVVFE 65

Query: 299 DVASASNALRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTFAPXXXXXXXXXXXXXXXXX 478
           +V+SA+NALRQMQGFPFYDKPMRIQYAKTKSDIIAK+DG+F P                 
Sbjct: 66  EVSSATNALRQMQGFPFYDKPMRIQYAKTKSDIIAKSDGSFVPREKRKRHEEKGRKKKEQ 125

Query: 479 XXANQXXXXXXXXXXXXXXXXXXXSQIPYM-GARAPEGPAPPNNILFVQNLPHQTNSMTL 655
             ANQ                   SQ+PY  G   PE PAPPN+ILFVQNLPH+T  M L
Sbjct: 126 HDANQ-AGMGLNPAFAGAYGATAHSQVPYSGGVMVPEAPAPPNSILFVQNLPHETTPMML 184

Query: 656 QMLFSQFPGFKEVRMVEAKPGISFVEFENEMQSTVAMQGLQGFKITEDNPMLITYAKK 829
           QMLF Q+PGFKEVRMVEAKPGI+FVE+ +E+QSTVAMQ LQGFK+   N MLITYAKK
Sbjct: 185 QMLFCQYPGFKEVRMVEAKPGIAFVEYSDEVQSTVAMQALQGFKMNPQNSMLITYAKK 242