BLASTX nr result

ID: Scutellaria24_contig00007806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00007806
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307496.1| predicted protein [Populus trichocarpa] gi|3...   186   2e-45
ref|XP_002300922.1| predicted protein [Populus trichocarpa] gi|2...   184   7e-45
ref|XP_003607812.1| U6 snRNA-associated Sm-like protein LSm3 [Me...   184   7e-45
gb|AFK35032.1| unknown [Lotus japonicus] gi|388511495|gb|AFK4380...   184   1e-44
ref|NP_001235961.1| uncharacterized protein LOC100499782 [Glycin...   184   1e-44

>ref|XP_002307496.1| predicted protein [Populus trichocarpa]
           gi|359493111|ref|XP_002266320.2| PREDICTED: U6
           snRNA-associated Sm-like protein LSm3-like isoform 1
           [Vitis vinifera] gi|222856945|gb|EEE94492.1| predicted
           protein [Populus trichocarpa]
          Length = 97

 Score =  186 bits (473), Expect = 2e-45
 Identities = 95/97 (97%), Positives = 95/97 (97%)
 Frame = -3

Query: 581 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLNMILGDVEEIVTTVE 402
           M SEEESAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLNMILGDVEEIVTTVE
Sbjct: 1   MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVE 60

Query: 401 IDDETYEEIVRTTRRTVPFLFVRGDGVILVSPPLRTA 291
           IDDETYEEIVRTTRRTVPFLFVRGDGVILVSPPLRTA
Sbjct: 61  IDDETYEEIVRTTRRTVPFLFVRGDGVILVSPPLRTA 97


>ref|XP_002300922.1| predicted protein [Populus trichocarpa] gi|222842648|gb|EEE80195.1|
           predicted protein [Populus trichocarpa]
          Length = 97

 Score =  184 bits (468), Expect = 7e-45
 Identities = 94/97 (96%), Positives = 94/97 (96%)
 Frame = -3

Query: 581 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLNMILGDVEEIVTTVE 402
           M SEEESAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLNMILGDVEEIVTTVE
Sbjct: 1   MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVE 60

Query: 401 IDDETYEEIVRTTRRTVPFLFVRGDGVILVSPPLRTA 291
           IDDETYEEIVR TRRTVPFLFVRGDGVILVSPPLRTA
Sbjct: 61  IDDETYEEIVRATRRTVPFLFVRGDGVILVSPPLRTA 97


>ref|XP_003607812.1| U6 snRNA-associated Sm-like protein LSm3 [Medicago truncatula]
           gi|355508867|gb|AES90009.1| U6 snRNA-associated Sm-like
           protein LSm3 [Medicago truncatula]
          Length = 98

 Score =  184 bits (468), Expect = 7e-45
 Identities = 93/96 (96%), Positives = 95/96 (98%)
 Frame = -3

Query: 578 GSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLNMILGDVEEIVTTVEI 399
           G+EEESAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLNMILGDVEEIVTTVEI
Sbjct: 3   GTEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEI 62

Query: 398 DDETYEEIVRTTRRTVPFLFVRGDGVILVSPPLRTA 291
           DDETYEEIVRTT+RTVPFLFVRGDGVILVSPPLRTA
Sbjct: 63  DDETYEEIVRTTKRTVPFLFVRGDGVILVSPPLRTA 98


>gb|AFK35032.1| unknown [Lotus japonicus] gi|388511495|gb|AFK43809.1| unknown
           [Lotus japonicus]
          Length = 97

 Score =  184 bits (467), Expect = 1e-44
 Identities = 93/97 (95%), Positives = 95/97 (97%)
 Frame = -3

Query: 581 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLNMILGDVEEIVTTVE 402
           M +EEESAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLNMILGDVEEIVTTVE
Sbjct: 1   MAAEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVE 60

Query: 401 IDDETYEEIVRTTRRTVPFLFVRGDGVILVSPPLRTA 291
           IDDETYEEIVRTT+RTVPFLFVRGDGVILVSPPLRTA
Sbjct: 61  IDDETYEEIVRTTKRTVPFLFVRGDGVILVSPPLRTA 97


>ref|NP_001235961.1| uncharacterized protein LOC100499782 [Glycine max]
           gi|255626487|gb|ACU13588.1| unknown [Glycine max]
          Length = 97

 Score =  184 bits (467), Expect = 1e-44
 Identities = 93/97 (95%), Positives = 95/97 (97%)
 Frame = -3

Query: 581 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLNMILGDVEEIVTTVE 402
           M +EEESAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLNMILGDVEEIVTTVE
Sbjct: 1   MATEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVE 60

Query: 401 IDDETYEEIVRTTRRTVPFLFVRGDGVILVSPPLRTA 291
           IDDETYEEIVRTT+RTVPFLFVRGDGVILVSPPLRTA
Sbjct: 61  IDDETYEEIVRTTKRTVPFLFVRGDGVILVSPPLRTA 97


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