BLASTX nr result

ID: Scutellaria24_contig00007696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00007696
         (223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003592874.1| Auxin response factor [Medicago truncatula] ...    48   1e-06
gb|ABO80473.1| AUX/IAA protein; Transcriptional factor B3; Auxin...    48   1e-06

>ref|XP_003592874.1| Auxin response factor [Medicago truncatula]
           gi|355481922|gb|AES63125.1| Auxin response factor
           [Medicago truncatula]
          Length = 671

 Score = 47.8 bits (112), Expect(2) = 1e-06
 Identities = 24/39 (61%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
 Frame = -1

Query: 115 PSIKNDLDLIGMWKSPADSPSAFPCRDPSRGRDMY-SPK 2
           PS   D  L G+WKSPADSP  FP RDP  GRD+Y SP+
Sbjct: 379 PSTMTDSSLQGIWKSPADSP-PFPYRDPQHGRDLYPSPR 416



 Score = 29.6 bits (65), Expect(2) = 1e-06
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -3

Query: 221 NKRARPPVLPSPMQDLS 171
           NKR+RPP+LPS M D S
Sbjct: 370 NKRSRPPILPSTMTDSS 386


>gb|ABO80473.1| AUX/IAA protein; Transcriptional factor B3; Auxin response factor
           [Medicago truncatula]
          Length = 670

 Score = 47.8 bits (112), Expect(2) = 1e-06
 Identities = 24/39 (61%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
 Frame = -1

Query: 115 PSIKNDLDLIGMWKSPADSPSAFPCRDPSRGRDMY-SPK 2
           PS   D  L G+WKSPADSP  FP RDP  GRD+Y SP+
Sbjct: 378 PSTMTDSSLQGIWKSPADSP-PFPYRDPQHGRDLYPSPR 415



 Score = 29.6 bits (65), Expect(2) = 1e-06
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -3

Query: 221 NKRARPPVLPSPMQDLS 171
           NKR+RPP+LPS M D S
Sbjct: 369 NKRSRPPILPSTMTDSS 385


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