BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00007639
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298371.1| predicted protein [Populus trichocarpa] gi|2...   200   9e-50
ref|XP_002532754.1| pentatricopeptide repeat-containing protein,...   196   2e-48
ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat...   189   2e-46
ref|XP_002866357.1| pentatricopeptide repeat-containing protein ...   183   1e-44
ref|NP_200798.1| pentatricopeptide repeat-containing protein [Ar...   179   2e-43

>ref|XP_002298371.1| predicted protein [Populus trichocarpa] gi|222845629|gb|EEE83176.1|
            predicted protein [Populus trichocarpa]
          Length = 915

 Score =  200 bits (509), Expect = 9e-50
 Identities = 92/150 (61%), Positives = 116/150 (77%)
 Frame = -1

Query: 452  AKEFVDRLHKEHNKLNEFCYSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQ 273
            AK+F+D LH+EH KLNE CYSALL GYCK GRL+DAL  C +M  RG+DMDL+CYA++I 
Sbjct: 595  AKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLID 654

Query: 272  GILEKKDTKLLIYTLKEIHDQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVTP 93
            G ++++DT  +   LK +HDQ L PD VIYTS+ID Y KAG+++ A   WDIM+ EG TP
Sbjct: 655  GTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTP 714

Query: 92   NVVTYTAMINSLCKAGFVRKAEILLKEMLV 3
            N+VTYT +IN LCKAG + KAE+L KEMLV
Sbjct: 715  NIVTYTTLINELCKAGLMDKAELLWKEMLV 744



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 44/148 (29%), Positives = 81/148 (54%)
 Frame = -1

Query: 452 AKEFVDRLHKEHNKLNEFCYSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQ 273
           A + V+R+ K     + F Y+AL++  CK G+  +A     +MG++G+  + + Y+I+I 
Sbjct: 350 AFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILID 409

Query: 272 GILEKKDTKLLIYTLKEIHDQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVTP 93
               +      I+ L ++   G+      Y S+I+ + K GNL  A++ +D M+ +G+ P
Sbjct: 410 SFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKP 469

Query: 92  NVVTYTAMINSLCKAGFVRKAEILLKEM 9
            VV+YT++I+  C  G + +A  L  EM
Sbjct: 470 TVVSYTSLISGYCNKGKLHEAFRLYHEM 497



 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 44/134 (32%), Positives = 68/134 (50%)
 Frame = -1

Query: 407 NEFCYSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQGILEKKDTKLLIYTL 228
           N+  YS L+D +C+RG+L  A+     M   GI + +  Y  +I G  +  +    +   
Sbjct: 400 NDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFF 459

Query: 227 KEIHDQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVTPNVVTYTAMINSLCKA 48
            E+ D+GL P  V YTS+I  Y   G L  A   +  M  +G+ PN  T+T +I++L +A
Sbjct: 460 DEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRA 519

Query: 47  GFVRKAEILLKEML 6
             +  A  L  EML
Sbjct: 520 NRMTDAFRLFDEML 533



 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 43/149 (28%), Positives = 76/149 (51%)
 Frame = -1

Query: 452 AKEFVDRLHKEHNKLNEFCYSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQ 273
           A  F+ ++     K+  + Y++L++G+CK G L  A+S   +M D+G+   ++ Y  +I 
Sbjct: 420 AIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLIS 479

Query: 272 GILEKKDTKLLIYTLKEIHDQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVTP 93
           G   K           E+  +G++P+   +T++I    +A  +  A   +D M+ + + P
Sbjct: 480 GYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMP 539

Query: 92  NVVTYTAMINSLCKAGFVRKAEILLKEML 6
           N VTY  MI   CK G   KA  LL +M+
Sbjct: 540 NEVTYNVMIEGHCKEGNTVKAFELLNQMV 568



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 39/148 (26%), Positives = 71/148 (47%)
 Frame = -1

Query: 452 AKEFVDRLHKEHNKLNEFCYSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQ 273
           A  F D +  +  K     Y++L+ GYC +G+L +A     +M  +GI  +   +  +I 
Sbjct: 455 AVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLIS 514

Query: 272 GILEKKDTKLLIYTLKEIHDQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVTP 93
            +              E+ +Q + P+ V Y  +I+ + K GN   A    + MV +G+ P
Sbjct: 515 ALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVP 574

Query: 92  NVVTYTAMINSLCKAGFVRKAEILLKEM 9
           +  TY  +I+SLC  G V +A+  + ++
Sbjct: 575 DTYTYRPLISSLCSTGRVCEAKKFIDDL 602



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 40/148 (27%), Positives = 76/148 (51%)
 Frame = -1

Query: 452 AKEFVDRLHKEHNKLNEFCYSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQ 273
           AKE + R+  E + LN   Y+ L+ G CK  R+ +A+     +  +G+    + Y  ++ 
Sbjct: 247 AKEMIQRM--ESSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVL 304

Query: 272 GILEKKDTKLLIYTLKEIHDQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVTP 93
           G+ + ++ ++    + E+ + G  P     +S+++   + G +  A    + +   G  P
Sbjct: 305 GLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMP 364

Query: 92  NVVTYTAMINSLCKAGFVRKAEILLKEM 9
           ++  Y A+INSLCK G   +AE+L KEM
Sbjct: 365 SLFVYNALINSLCKDGKFDEAELLFKEM 392



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 38/134 (28%), Positives = 69/134 (51%)
 Frame = -1

Query: 407  NEFCYSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQGILEKKDTKLLIYTL 228
            N   Y   LD   + G ++ A+    DM  +G+  + + Y I+++G  +    +     L
Sbjct: 750  NHVTYCCFLDHLAREGSMEKAVQLHNDML-KGLLANTVSYNILVRGFCKLGRVEEATKLL 808

Query: 227  KEIHDQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVTPNVVTYTAMINSLCKA 48
             E+ D  + PD + Y++II +  + GNL+ A+  WD M+ +G+ P+ + Y  +I   C A
Sbjct: 809  DEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIA 868

Query: 47   GFVRKAEILLKEML 6
            G + KA  L  +M+
Sbjct: 869  GELGKAFELRDDMI 882



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 2/135 (1%)
 Frame = -1

Query: 404 EFCYSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQGILE--KKDTKLLIYT 231
           E   S+L++G  ++G++ DA      +   G    L  Y  +I  + +  K D   L++ 
Sbjct: 331 EAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLF- 389

Query: 230 LKEIHDQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVTPNVVTYTAMINSLCK 51
            KE+ ++GL  ++V Y+ +ID + + G L+ A+     M+  G+   V  Y ++IN  CK
Sbjct: 390 -KEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCK 448

Query: 50  AGFVRKAEILLKEML 6
            G +  A     EM+
Sbjct: 449 LGNLSAAVSFFDEMI 463


>ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527505|gb|EEF29631.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 721

 Score =  196 bits (498), Expect = 2e-48
 Identities = 94/150 (62%), Positives = 114/150 (76%)
 Frame = -1

Query: 452 AKEFVDRLHKEHNKLNEFCYSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQ 273
           AKEFVD LHK+H+KLN  CYSAL+ GYCK GR KDA+S C  M +RG+ MDL+CYAI+I 
Sbjct: 421 AKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILID 480

Query: 272 GILEKKDTKLLIYTLKEIHDQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVTP 93
           G   + DT+ L   LKE+H+ GL PD VIYT++ID++ KAGNL+ A   WDIMV EG  P
Sbjct: 481 GTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLP 540

Query: 92  NVVTYTAMINSLCKAGFVRKAEILLKEMLV 3
           NVVTYTA+IN LCKAG + KAE+L KE LV
Sbjct: 541 NVVTYTALINGLCKAGLMDKAELLSKETLV 570



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 43/133 (32%), Positives = 69/133 (51%)
 Frame = -1

Query: 407 NEFCYSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQGILEKKDTKLLIYTL 228
           N   YS L+D +C+RG + +A+     M    I+  +  Y  +I G  +  +     Y  
Sbjct: 226 NHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYF 285

Query: 227 KEIHDQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVTPNVVTYTAMINSLCKA 48
            E+ D+GL+P  V YTS+I  Y   G    A   ++ M  +G++PN  T+TA+I+ LC+A
Sbjct: 286 DEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRA 345

Query: 47  GFVRKAEILLKEM 9
             + +A  L  EM
Sbjct: 346 NMMAEAIRLFGEM 358



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 40/146 (27%), Positives = 74/146 (50%)
 Frame = -1

Query: 443 FVDRLHKEHNKLNEFCYSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQGIL 264
           F+D++ K   +   + Y++L++GYCK G    A     +M D+G+   ++ Y  +I G  
Sbjct: 249 FLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYC 308

Query: 263 EKKDTKLLIYTLKEIHDQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVTPNVV 84
            + +         E+  +G+SP+   +T+II    +A  +  A+  +  M    + P+ V
Sbjct: 309 NEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEV 368

Query: 83  TYTAMINSLCKAGFVRKAEILLKEML 6
           TY  MI   C++G + +A  LL EM+
Sbjct: 369 TYNVMIEGHCRSGNISEAFHLLDEMV 394



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 37/148 (25%), Positives = 68/148 (45%)
 Frame = -1

Query: 452 AKEFVDRLHKEHNKLNEFCYSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQ 273
           AK + D +  +        Y++L+ GYC  G    A     +M  +GI  +   +  +I 
Sbjct: 281 AKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIIS 340

Query: 272 GILEKKDTKLLIYTLKEIHDQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVTP 93
           G+         I    E+ ++ + P  V Y  +I+ + ++GN+  A    D MV +G  P
Sbjct: 341 GLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVP 400

Query: 92  NVVTYTAMINSLCKAGFVRKAEILLKEM 9
           +  TY  +I+ LC  G V +A+  + ++
Sbjct: 401 DTYTYRPLISGLCSVGRVSEAKEFVDDL 428



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 38/149 (25%), Positives = 73/149 (48%)
 Frame = -1

Query: 452 AKEFVDRLHKEHNKLNEFCYSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQ 273
           AKE +  +     KL+   Y+ L+ G CK  R+ +AL     +  +G++ +++ Y     
Sbjct: 150 AKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY----- 204

Query: 272 GILEKKDTKLLIYTLKEIHDQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVTP 93
               K +   L++  KE+ ++GL  +++ Y+ +ID + + G ++ A+   D M    +  
Sbjct: 205 --YGKFNEAELLF--KEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEF 260

Query: 92  NVVTYTAMINSLCKAGFVRKAEILLKEML 6
            V  Y ++IN  CK G    A+    EM+
Sbjct: 261 TVYPYNSLINGYCKLGNASAAKYYFDEMI 289


>ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g59900 [Vitis vinifera]
          Length = 900

 Score =  189 bits (480), Expect = 2e-46
 Identities = 89/149 (59%), Positives = 114/149 (76%)
 Frame = -1

Query: 452  AKEFVDRLHKEHNKLNEFCYSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQ 273
            A+EF++ L  E  KLNE C+SALL GYCK GRL DAL  C +M  RG+ MDL+CY+++I 
Sbjct: 584  AREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIY 643

Query: 272  GILEKKDTKLLIYTLKEIHDQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVTP 93
            GIL ++D + +I  LK++HDQGL PDNV+YT++ID   KAGNL+MA   WDIMV+EG  P
Sbjct: 644  GILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLP 703

Query: 92   NVVTYTAMINSLCKAGFVRKAEILLKEML 6
            NVVTYTA+IN LCK G + KAE+L +EML
Sbjct: 704  NVVTYTALINGLCKIGLMDKAELLCREML 732



 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 45/148 (30%), Positives = 82/148 (55%)
 Frame = -1

Query: 452 AKEFVDRLHKEHNKLNEFCYSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQ 273
           A + V+++ K     + F Y+AL++  CK G+L +A S   +MG +G+  + + Y+I+I 
Sbjct: 339 AFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILID 398

Query: 272 GILEKKDTKLLIYTLKEIHDQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVTP 93
              ++    + ++ L ++ + G+      Y+S+I  + K G L  A + +D M+  G+ P
Sbjct: 399 SFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKP 458

Query: 92  NVVTYTAMINSLCKAGFVRKAEILLKEM 9
           NVV YT++I+  CK G +  A  L  EM
Sbjct: 459 NVVIYTSLISGYCKEGELHNAFRLYHEM 486



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/118 (32%), Positives = 60/118 (50%)
 Frame = -1

Query: 407  NEFCYSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQGILEKKDTKLLIYTL 228
            N   Y+ L+ G+CK GR+++A     +M D GI  D + Y+ +I     + D K  I   
Sbjct: 773  NTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLW 832

Query: 227  KEIHDQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVTPNVVTYTAMINSLC 54
            + + ++G++PD V Y  +I      G L  A    D M+  GV PN  TY ++I+  C
Sbjct: 833  ESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 890



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 43/149 (28%), Positives = 74/149 (49%)
 Frame = -1

Query: 452 AKEFVDRLHKEHNKLNEFCYSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQ 273
           A  F+ ++ +   K   + YS+L+ G+CK G+L+ A S   +M   G+  +++ Y  +I 
Sbjct: 409 ALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLIS 468

Query: 272 GILEKKDTKLLIYTLKEIHDQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVTP 93
           G  ++ +         E+  +G+SP+   +T++I     A  +  A   +  MV   V P
Sbjct: 469 GYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIP 528

Query: 92  NVVTYTAMINSLCKAGFVRKAEILLKEML 6
           N VTY  +I   CK G   +A  LL EM+
Sbjct: 529 NEVTYNVLIEGHCKEGNTVRAFELLDEMV 557



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 37/148 (25%), Positives = 73/148 (49%)
 Frame = -1

Query: 452 AKEFVDRLHKEHNKLNEFCYSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQ 273
           A+E + R+      L+   Y+  + G CK  R+ +A+     +  +G+  D+  Y  ++ 
Sbjct: 234 AREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVL 293

Query: 272 GILEKKDTKLLIYTLKEIHDQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVTP 93
           G+ + ++ +     + E+ + G  P     ++++D   K GN+  A    + +   GV P
Sbjct: 294 GLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAP 353

Query: 92  NVVTYTAMINSLCKAGFVRKAEILLKEM 9
           ++  Y A+INS+CK G + +AE L   M
Sbjct: 354 SLFVYNALINSMCKDGKLDEAESLFNNM 381



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 39/134 (29%), Positives = 68/134 (50%)
 Frame = -1

Query: 407  NEFCYSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQGILEKKDTKLLIYTL 228
            N+  Y+  LD     G ++ A+    D+   G   + + Y I+I+G  +    +     L
Sbjct: 739  NQNTYACFLDYLTSEGNIEKAIQL-HDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVL 797

Query: 227  KEIHDQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVTPNVVTYTAMINSLCKA 48
              + D G+SPD + Y++II +Y + G+L+ A+  W+ M+  GV P+ V Y  +I   C  
Sbjct: 798  VNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVT 857

Query: 47   GFVRKAEILLKEML 6
            G + KA  L  +M+
Sbjct: 858  GELTKAFELRDDMM 871



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 36/134 (26%), Positives = 63/134 (47%)
 Frame = -1

Query: 407 NEFCYSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQGILEKKDTKLLIYTL 228
           +E   S L+DG  K+G +  A      +   G+   L  Y  +I  + +           
Sbjct: 319 SEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLF 378

Query: 227 KEIHDQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVTPNVVTYTAMINSLCKA 48
             +  +GL P++V Y+ +ID + K G L++A+     M   G+   V  Y+++I+  CK 
Sbjct: 379 NNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKL 438

Query: 47  GFVRKAEILLKEML 6
           G +R A+ L  EM+
Sbjct: 439 GKLRAAKSLFDEMI 452


>ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297312192|gb|EFH42616.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 907

 Score =  183 bits (464), Expect = 1e-44
 Identities = 84/148 (56%), Positives = 111/148 (75%)
 Frame = -1

Query: 452  AKEFVDRLHKEHNKLNEFCYSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQ 273
            AK FVD LHK + +LNE CY+ LL G+C+ G+L++ALS C DMG RG+D+DL+CY ++I 
Sbjct: 596  AKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLID 655

Query: 272  GILEKKDTKLLIYTLKEIHDQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVTP 93
            G L+ KD K+ +  LKE+HD+GL PD+VIYTS+ID   K G+ + A   WD+M+ EG  P
Sbjct: 656  GSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVP 715

Query: 92   NVVTYTAMINSLCKAGFVRKAEILLKEM 9
            N VTYTA+IN LCKAGFV +AEIL  +M
Sbjct: 716  NEVTYTAVINGLCKAGFVNEAEILCSKM 743



 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 46/148 (31%), Positives = 77/148 (52%)
 Frame = -1

Query: 452 AKEFVDRLHKEHNKLNEFCYSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQ 273
           A+   DR+ K     N+  YS L+D +C+RG+L  ALS   +M D G+   +  Y  +I 
Sbjct: 386 AELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLIN 445

Query: 272 GILEKKDTKLLIYTLKEIHDQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVTP 93
           G  +  D       + E+ ++ L P  V YTS++  Y   G +  A+  +  M  +G+ P
Sbjct: 446 GHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVP 505

Query: 92  NVVTYTAMINSLCKAGFVRKAEILLKEM 9
           ++ T+T +++ L +AG +R A  L  EM
Sbjct: 506 SIYTFTTLLSGLFRAGLIRDAVKLFTEM 533



 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 42/150 (28%), Positives = 84/150 (56%), Gaps = 3/150 (2%)
 Frame = -1

Query: 446 EFVDRLHKEHNKLNEFCYSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQGI 267
           E +D + +     +E   S+L++G  KRG++++AL+    + + G+  ++  Y  +I  +
Sbjct: 318 EMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSL 377

Query: 266 LEKK---DTKLLIYTLKEIHDQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVT 96
            + +   + +LL   + +I   GL P++V Y+ +ID + + G L+ A++    M+  G+ 
Sbjct: 378 CKGRNFDEAELLFDRMGKI---GLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLK 434

Query: 95  PNVVTYTAMINSLCKAGFVRKAEILLKEML 6
           P+V  Y ++IN  CK G +  AE L+ EM+
Sbjct: 435 PSVYPYNSLINGHCKFGDISAAESLMAEMI 464



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 38/148 (25%), Positives = 78/148 (52%)
 Frame = -1

Query: 452 AKEFVDRLHKEHNKLNEFCYSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQ 273
           AKE + ++      +N   Y+ L+DG CK+ ++ +A+    D+  + +  D++ Y  ++ 
Sbjct: 246 AKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVC 305

Query: 272 GILEKKDTKLLIYTLKEIHDQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVTP 93
           G+ + ++ ++ +  + E+     SP     +S+++   K G +E A+     +   GV+P
Sbjct: 306 GLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSP 365

Query: 92  NVVTYTAMINSLCKAGFVRKAEILLKEM 9
           N+  Y A+I+SLCK     +AE+L   M
Sbjct: 366 NIFVYNALIDSLCKGRNFDEAELLFDRM 393



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/126 (23%), Positives = 65/126 (51%)
 Frame = -1

Query: 395 YSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQGILEKKDTKLLIYTLKEIH 216
           Y++L+ GYC +G++  AL    +M  +GI   +  +  ++ G+      +  +    E+ 
Sbjct: 475 YTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMA 534

Query: 215 DQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVTPNVVTYTAMINSLCKAGFVR 36
           +  + P+ V Y  +I+ Y + GN+  A    + M+ +G+ P+  +Y  +I+ LC  G   
Sbjct: 535 EWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQAS 594

Query: 35  KAEILL 18
           +A++ +
Sbjct: 595 EAKVFV 600



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 41/133 (30%), Positives = 65/133 (48%)
 Frame = -1

Query: 407 NEFCYSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQGILEKKDTKLLIYTL 228
           N F Y+AL+D  CK     +A      MG  G+  + + Y+I+I     +      +  L
Sbjct: 366 NIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFL 425

Query: 227 KEIHDQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVTPNVVTYTAMINSLCKA 48
            E+ D GL P    Y S+I+ + K G++  A +    M+ + + P VVTYT+++   C  
Sbjct: 426 GEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSK 485

Query: 47  GFVRKAEILLKEM 9
           G + KA  L  EM
Sbjct: 486 GKINKALRLYHEM 498



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 37/136 (27%), Positives = 69/136 (50%)
 Frame = -1

Query: 413 KLNEFCYSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQGILEKKDTKLLIY 234
           K + + Y++L++G+CK G +  A S  A+M ++ ++  ++ Y  ++ G   K      + 
Sbjct: 434 KPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALR 493

Query: 233 TLKEIHDQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVTPNVVTYTAMINSLC 54
              E+  +G+ P    +T+++    +AG +  A+  +  M    V PN VTY  MI   C
Sbjct: 494 LYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYC 553

Query: 53  KAGFVRKAEILLKEML 6
           + G + KA   L EM+
Sbjct: 554 EEGNMSKAFEFLNEMI 569



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/116 (26%), Positives = 57/116 (49%)
 Frame = -1

Query: 407  NEFCYSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQGILEKKDTKLLIYTL 228
            N   Y+ L+ G+C++GR+++A      M   G+  D + Y  +I  +  + D K  I   
Sbjct: 786  NTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELW 845

Query: 227  KEIHDQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVTPNVVTYTAMINS 60
              + ++G+ PD V Y ++I     AG +  A    + M+ +G+ PN  T    I++
Sbjct: 846  NSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTISN 901


>ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName:
            Full=Putative pentatricopeptide repeat-containing protein
            At5g59900 gi|9757911|dbj|BAB08358.1| unnamed protein
            product [Arabidopsis thaliana]
            gi|332009866|gb|AED97249.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  179 bits (455), Expect = 2e-43
 Identities = 82/148 (55%), Positives = 109/148 (73%)
 Frame = -1

Query: 452  AKEFVDRLHKEHNKLNEFCYSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQ 273
            AK FVD LHK + +LNE CY+ LL G+C+ G+L++ALS C +M  RG+D+DL+CY ++I 
Sbjct: 596  AKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLID 655

Query: 272  GILEKKDTKLLIYTLKEIHDQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVTP 93
            G L+ KD KL    LKE+HD+GL PD+VIYTS+ID   K G+ + A   WD+M+ EG  P
Sbjct: 656  GSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVP 715

Query: 92   NVVTYTAMINSLCKAGFVRKAEILLKEM 9
            N VTYTA+IN LCKAGFV +AE+L  +M
Sbjct: 716  NEVTYTAVINGLCKAGFVNEAEVLCSKM 743



 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 46/148 (31%), Positives = 79/148 (53%)
 Frame = -1

Query: 452 AKEFVDRLHKEHNKLNEFCYSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQ 273
           A+   DR+ K   + N+  YS L+D +C+RG+L  ALS   +M D G+ + +  Y  +I 
Sbjct: 386 AELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLIN 445

Query: 272 GILEKKDTKLLIYTLKEIHDQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVTP 93
           G  +  D       + E+ ++ L P  V YTS++  Y   G +  A+  +  M  +G+ P
Sbjct: 446 GHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAP 505

Query: 92  NVVTYTAMINSLCKAGFVRKAEILLKEM 9
           ++ T+T +++ L +AG +R A  L  EM
Sbjct: 506 SIYTFTTLLSGLFRAGLIRDAVKLFNEM 533



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/148 (26%), Positives = 78/148 (52%)
 Frame = -1

Query: 452 AKEFVDRLHKEHNKLNEFCYSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQ 273
           AKE +  +      +N   Y+ L+DG CK+ ++ +A+    D+  + +  D++ Y  ++ 
Sbjct: 246 AKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVY 305

Query: 272 GILEKKDTKLLIYTLKEIHDQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVTP 93
           G+ + ++ ++ +  + E+     SP     +S+++   K G +E A+     +V  GV+P
Sbjct: 306 GLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSP 365

Query: 92  NVVTYTAMINSLCKAGFVRKAEILLKEM 9
           N+  Y A+I+SLCK     +AE+L   M
Sbjct: 366 NLFVYNALIDSLCKGRKFHEAELLFDRM 393



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 41/137 (29%), Positives = 77/137 (56%), Gaps = 3/137 (2%)
 Frame = -1

Query: 407 NEFCYSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQGILEKK---DTKLLI 237
           +E   S+L++G  KRG++++AL+    + D G+  +L  Y  +I  + + +   + +LL 
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLF 390

Query: 236 YTLKEIHDQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVTPNVVTYTAMINSL 57
             + +I   GL P++V Y+ +ID + + G L+ A++    MV  G+  +V  Y ++IN  
Sbjct: 391 DRMGKI---GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGH 447

Query: 56  CKAGFVRKAEILLKEML 6
           CK G +  AE  + EM+
Sbjct: 448 CKFGDISAAEGFMAEMI 464



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 38/135 (28%), Positives = 71/135 (52%)
 Frame = -1

Query: 413 KLNEFCYSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQGILEKKDTKLLIY 234
           KL+ + Y++L++G+CK G +  A    A+M ++ ++  ++ Y  ++ G   K      + 
Sbjct: 434 KLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALR 493

Query: 233 TLKEIHDQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVTPNVVTYTAMINSLC 54
              E+  +G++P    +T+++    +AG +  A+  ++ M    V PN VTY  MI   C
Sbjct: 494 LYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYC 553

Query: 53  KAGFVRKAEILLKEM 9
           + G + KA   LKEM
Sbjct: 554 EEGDMSKAFEFLKEM 568



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 29/126 (23%), Positives = 63/126 (50%)
 Frame = -1

Query: 395 YSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQGILEKKDTKLLIYTLKEIH 216
           Y++L+ GYC +G++  AL    +M  +GI   +  +  ++ G+      +  +    E+ 
Sbjct: 475 YTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA 534

Query: 215 DQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVTPNVVTYTAMINSLCKAGFVR 36
           +  + P+ V Y  +I+ Y + G++  A      M  +G+ P+  +Y  +I+ LC  G   
Sbjct: 535 EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQAS 594

Query: 35  KAEILL 18
           +A++ +
Sbjct: 595 EAKVFV 600



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/132 (23%), Positives = 63/132 (47%)
 Frame = -1

Query: 401 FCYSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQGILEKKDTKLLIYTLKE 222
           + ++ LL G  + G ++DA+    +M +  +  + + Y ++I+G  E+ D       LKE
Sbjct: 508 YTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKE 567

Query: 221 IHDQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVTPNVVTYTAMINSLCKAGF 42
           + ++G+ PD   Y  +I      G    A    D +       N + YT +++  C+ G 
Sbjct: 568 MTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGK 627

Query: 41  VRKAEILLKEML 6
           + +A  + +EM+
Sbjct: 628 LEEALSVCQEMV 639



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/106 (27%), Positives = 53/106 (50%)
 Frame = -1

Query: 407  NEFCYSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQGILEKKDTKLLIYTL 228
            N   Y+ L+ G+C++GR+++A      M   G+  D + Y  +I  +  + D K  I   
Sbjct: 786  NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELW 845

Query: 227  KEIHDQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVTPN 90
              + ++G+ PD V Y ++I     AG +  A    + M+ +G+ PN
Sbjct: 846  NSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 35/135 (25%), Positives = 61/135 (45%)
 Frame = -1

Query: 413 KLNEFCYSALLDGYCKRGRLKDALSTCADMGDRGIDMDLLCYAIVIQGILEKKDTKLLIY 234
           K N   Y+ +++GYC+ G +  A     +M ++GI  D   Y  +I G+           
Sbjct: 539 KPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKV 598

Query: 233 TLKEIHDQGLSPDNVIYTSIIDKYGKAGNLEMAMAHWDIMVTEGVTPNVVTYTAMINSLC 54
            +  +H      + + YT ++  + + G LE A++    MV  GV  ++V Y  +I+   
Sbjct: 599 FVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSL 658

Query: 53  KAGFVRKAEILLKEM 9
           K    +    LLKEM
Sbjct: 659 KHKDRKLFFGLLKEM 673