BLASTX nr result

ID: Scutellaria24_contig00007554 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00007554
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002889280.1| hypothetical protein ARALYDRAFT_316895 [Arab...    79   6e-13
ref|NP_178180.1| RNAse THREE-like protein 1 [Arabidopsis thalian...    79   9e-13
ref|XP_002527323.1| double-stranded RNA binding protein, putativ...    77   4e-12
ref|XP_002523532.1| Ribonuclease III, putative [Ricinus communis...    76   6e-12
ref|XP_003546918.1| PREDICTED: dicer-like protein 4-like [Glycin...    75   1e-11

>ref|XP_002889280.1| hypothetical protein ARALYDRAFT_316895 [Arabidopsis lyrata subsp.
           lyrata] gi|297335121|gb|EFH65539.1| hypothetical protein
           ARALYDRAFT_316895 [Arabidopsis lyrata subsp. lyrata]
          Length = 190

 Score = 79.3 bits (194), Expect = 6e-13
 Identities = 34/90 (37%), Positives = 51/90 (56%)
 Frame = +2

Query: 131 PPFSPDCGKKGSAKARLQELCCREHWKNAVYDCCNEQGPPHSKLFTFKVVLNIEAGESRE 310
           P    D  K+GSAK+ L E+C  + W+  VY+CC   GP H +LFT+KVV+ I     + 
Sbjct: 85  PNSKGDESKRGSAKSVLHEICASKRWRPPVYECCKVDGPCHLRLFTYKVVVEIIESSGKT 144

Query: 311 TVECFGNPRSSKRXXXXXXXXXXVWCFKHM 400
            +ECFG+PR +K+          +W  +H+
Sbjct: 145 VLECFGDPRRNKKAAAEHAAEGALWYLEHV 174


>ref|NP_178180.1| RNAse THREE-like protein 1 [Arabidopsis thaliana]
           gi|75264856|sp|Q9M8N2.1|RTL1_ARATH RecName:
           Full=Ribonuclease 3-like protein 1; AltName:
           Full=Ribonuclease III-like protein 1; Short=RNase
           III-like protein 1; AltName: Full=Ribonuclease
           three-like protein 1
           gi|6730736|gb|AAF27126.1|AC018849_14 hypothetical
           protein; 4021-3030 [Arabidopsis thaliana]
           gi|26449780|dbj|BAC42013.1| unknown protein [Arabidopsis
           thaliana] gi|28950719|gb|AAO63283.1| At1g80650
           [Arabidopsis thaliana] gi|332198311|gb|AEE36432.1| RNAse
           THREE-like protein 1 [Arabidopsis thaliana]
          Length = 198

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 31/82 (37%), Positives = 49/82 (59%)
 Frame = +2

Query: 155 KKGSAKARLQELCCREHWKNAVYDCCNEQGPPHSKLFTFKVVLNIEAGESRETVECFGNP 334
           ++GSAK+ L E+C  + W+  VY+CCN  GP H +LFT+KV++ I     +  +ECFG+P
Sbjct: 111 RRGSAKSVLHEMCASKRWRPPVYECCNVDGPCHLRLFTYKVMVEIRDSSGKTVLECFGDP 170

Query: 335 RSSKRXXXXXXXXXXVWCFKHM 400
           R  K+          +W  +H+
Sbjct: 171 RRKKKAAAEHAAEGALWYLEHV 192


>ref|XP_002527323.1| double-stranded RNA binding protein, putative [Ricinus communis]
           gi|223533323|gb|EEF35075.1| double-stranded RNA binding
           protein, putative [Ricinus communis]
          Length = 219

 Score = 76.6 bits (187), Expect = 4e-12
 Identities = 32/84 (38%), Positives = 51/84 (60%)
 Frame = +2

Query: 155 KKGSAKARLQELCCREHWKNAVYDCCNEQGPPHSKLFTFKVVLNIEAGESRETVECFGNP 334
           K+ SAK++L E+C   +WK  +Y+CC E+GP H +LFTFKV++ +  G     +EC+G P
Sbjct: 126 KRVSAKSQLHEICVANNWKPPLYECCKEEGPCHQRLFTFKVIVEM-IGAEYIVLECYGIP 184

Query: 335 RSSKRXXXXXXXXXXVWCFKHMGF 406
           +  K+          +W  KH+G+
Sbjct: 185 KIKKKTAAEHAAEGALWYLKHLGY 208


>ref|XP_002523532.1| Ribonuclease III, putative [Ricinus communis]
            gi|223537239|gb|EEF38871.1| Ribonuclease III, putative
            [Ricinus communis]
          Length = 1633

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 33/87 (37%), Positives = 50/87 (57%)
 Frame = +2

Query: 146  DCGKKGSAKARLQELCCREHWKNAVYDCCNEQGPPHSKLFTFKVVLNIEAGESRETVECF 325
            D  K  SAK+RL ++C    WK  +++CC E+GP H K F++KV++ IEA      +ECF
Sbjct: 1544 DMDKPTSAKSRLHDICAANCWKPPLFECCYEEGPSHLKSFSYKVIVEIEAAPDM-ILECF 1602

Query: 326  GNPRSSKRXXXXXXXXXXVWCFKHMGF 406
            G PR  K+          +W  +H+G+
Sbjct: 1603 GAPREKKKAAAEHAAEGALWYLQHVGY 1629


>ref|XP_003546918.1| PREDICTED: dicer-like protein 4-like [Glycine max]
          Length = 194

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 30/65 (46%), Positives = 45/65 (69%)
 Frame = +2

Query: 155 KKGSAKARLQELCCREHWKNAVYDCCNEQGPPHSKLFTFKVVLNIEAGESRETVECFGNP 334
           KKG+A++ L E+C    WK  +++CC E+GP H ++FTFKV++ IEA  SR  +EC+G P
Sbjct: 104 KKGTARSTLYEICAVNCWKPPIFECCKEEGPGHKRMFTFKVIIEIEA--SRNIIECYGAP 161

Query: 335 RSSKR 349
              K+
Sbjct: 162 HGKKK 166


Top