BLASTX nr result

ID: Scutellaria24_contig00007488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00007488
         (1407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK35075.1| unknown [Lotus japonicus]                              200   7e-49
ref|XP_003521329.1| PREDICTED: arginine/serine-rich-splicing fac...   198   2e-48
ref|XP_002320764.1| predicted protein [Populus trichocarpa] gi|2...   198   2e-48
ref|XP_003528886.1| PREDICTED: arginine/serine-rich-splicing fac...   196   9e-48
gb|ACU23673.1| unknown [Glycine max]                                  196   9e-48

>gb|AFK35075.1| unknown [Lotus japonicus]
          Length = 249

 Score =  200 bits (509), Expect = 7e-49
 Identities = 93/124 (75%), Positives = 112/124 (90%)
 Frame = -3

Query: 373 GFCFVYMEDERDAEDAIRRLDRIEFGRKGRRLRVEWTKQEHGGRKSDSSKKPSANSRPSK 194
           GF FVYMEDERDAE AIRRLDR EFGRKGRR+RVEWTKQE   R+S  S+KP++N +PSK
Sbjct: 36  GFAFVYMEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQERDSRRSADSRKPASNMKPSK 95

Query: 193 TLFVINFDPINTRTKDIERYFESHGRVSNVRIRRNFAFVQYELQEDATRALEATHLSKFM 14
           TLF+INFDP++TRT+D+ER+F+ +G++SN+RIRRNFAF+QYE  EDATRALEAT+LSKFM
Sbjct: 96  TLFIINFDPVHTRTRDLERHFDPYGKISNIRIRRNFAFIQYESLEDATRALEATNLSKFM 155

Query: 13  DRVI 2
           DRVI
Sbjct: 156 DRVI 159


>ref|XP_003521329.1| PREDICTED: arginine/serine-rich-splicing factor RSP41-like [Glycine
           max]
          Length = 252

 Score =  198 bits (504), Expect = 2e-48
 Identities = 96/125 (76%), Positives = 112/125 (89%), Gaps = 1/125 (0%)
 Frame = -3

Query: 373 GFCFVYMEDERDAEDAIRRLDRIEFGRKGRRLRVEWTKQEHGGRKSDS-SKKPSANSRPS 197
           GF FVYMEDERDAE AIRRLDR EFGRKGRR+RVEWTKQE   R+S   S+K S+NSRPS
Sbjct: 36  GFAFVYMEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQERDSRRSGGDSRKSSSNSRPS 95

Query: 196 KTLFVINFDPINTRTKDIERYFESHGRVSNVRIRRNFAFVQYELQEDATRALEATHLSKF 17
           KTLFVINFDP+N RT+D+ER+F+S+G++ N+RIRRNFAF+Q+E QEDATRALEAT+LSKF
Sbjct: 96  KTLFVINFDPVNARTRDLERHFDSYGKILNIRIRRNFAFIQFESQEDATRALEATNLSKF 155

Query: 16  MDRVI 2
           MDRVI
Sbjct: 156 MDRVI 160


>ref|XP_002320764.1| predicted protein [Populus trichocarpa] gi|222861537|gb|EEE99079.1|
           predicted protein [Populus trichocarpa]
          Length = 262

 Score =  198 bits (504), Expect = 2e-48
 Identities = 94/124 (75%), Positives = 109/124 (87%)
 Frame = -3

Query: 373 GFCFVYMEDERDAEDAIRRLDRIEFGRKGRRLRVEWTKQEHGGRKSDSSKKPSANSRPSK 194
           GF FVYMEDERDAEDAIRRLDR EFGRKGRRLRVEWTKQE   R+   S++ S N+ PSK
Sbjct: 36  GFAFVYMEDERDAEDAIRRLDRAEFGRKGRRLRVEWTKQERESRRPAGSRRSSTNTTPSK 95

Query: 193 TLFVINFDPINTRTKDIERYFESHGRVSNVRIRRNFAFVQYELQEDATRALEATHLSKFM 14
           TLFVINFDP++TRT+D+ER+F+ HG++ + RIRRNFAFVQYELQEDAT+ALEAT +SKFM
Sbjct: 96  TLFVINFDPVHTRTRDLERHFDPHGKILSTRIRRNFAFVQYELQEDATKALEATDMSKFM 155

Query: 13  DRVI 2
           DRVI
Sbjct: 156 DRVI 159


>ref|XP_003528886.1| PREDICTED: arginine/serine-rich-splicing factor RSP41-like [Glycine
           max]
          Length = 253

 Score =  196 bits (499), Expect = 9e-48
 Identities = 95/125 (76%), Positives = 112/125 (89%), Gaps = 1/125 (0%)
 Frame = -3

Query: 373 GFCFVYMEDERDAEDAIRRLDRIEFGRKGRRLRVEWTKQEHGGRKSDS-SKKPSANSRPS 197
           GF FVYMEDERDAE AIRRLDR EFGRKGRR+RVEWTKQE   R+S   S+K S+NSRPS
Sbjct: 36  GFAFVYMEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQERDSRRSGGDSRKSSSNSRPS 95

Query: 196 KTLFVINFDPINTRTKDIERYFESHGRVSNVRIRRNFAFVQYELQEDATRALEATHLSKF 17
           KTLFVINFDP++ RT+D+ER+F+S+G++ N+RIRRNFAF+Q+E QEDATRALEAT+LSKF
Sbjct: 96  KTLFVINFDPVHARTRDLERHFDSYGKILNIRIRRNFAFIQFESQEDATRALEATNLSKF 155

Query: 16  MDRVI 2
           MDRVI
Sbjct: 156 MDRVI 160


>gb|ACU23673.1| unknown [Glycine max]
          Length = 234

 Score =  196 bits (499), Expect = 9e-48
 Identities = 95/125 (76%), Positives = 112/125 (89%), Gaps = 1/125 (0%)
 Frame = -3

Query: 373 GFCFVYMEDERDAEDAIRRLDRIEFGRKGRRLRVEWTKQEHGGRKSDS-SKKPSANSRPS 197
           GF FVYMEDERDAE AIRRLDR EFGRKGRR+RVEWTKQE   R+S   S+K S+NSRPS
Sbjct: 36  GFAFVYMEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQERDSRRSGGDSRKSSSNSRPS 95

Query: 196 KTLFVINFDPINTRTKDIERYFESHGRVSNVRIRRNFAFVQYELQEDATRALEATHLSKF 17
           KTLFVINFDP++ RT+D+ER+F+S+G++ N+RIRRNFAF+Q+E QEDATRALEAT+LSKF
Sbjct: 96  KTLFVINFDPVHARTRDLERHFDSYGKILNIRIRRNFAFIQFESQEDATRALEATNLSKF 155

Query: 16  MDRVI 2
           MDRVI
Sbjct: 156 MDRVI 160


Top