BLASTX nr result

ID: Scutellaria24_contig00007403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00007403
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABY61746.1| resistance protein PSH-RGH7 [Solanum tuberosum]         57   1e-06
gb|AAC49408.1| PRF [Solanum lycopersicum]                              56   3e-06
gb|AAF76312.1|AF220603_4 Prf [Solanum lycopersicum]                    56   3e-06
gb|AAF76308.1| Prf [Solanum pimpinellifolium]                          56   3e-06

>gb|ABY61746.1| resistance protein PSH-RGH7 [Solanum tuberosum]
          Length = 930

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
 Frame = +2

Query: 2    AFQGDQWEVTGNFF-HLKYLLIDESDLRFWSFSRHRYFRKLVCLQLYRCPYLEDIPHQFG 178
            AF+G++WEV    F HLK+LL+DE D+R+W  S   +F  L  L L  C YL+ IP  F 
Sbjct: 800  AFKGEEWEVVEEGFPHLKFLLLDEVDIRYWRASSD-HFPYLERLFLKNCYYLDSIPLDFA 858

Query: 179  YSSKLELLEVDGGNEFLVKAAESILEEQHD 268
              + L L++++   + +  +A+ I +   D
Sbjct: 859  DITTLALIDIEHCQQSVGNSAKQIQQVIQD 888


>gb|AAC49408.1| PRF [Solanum lycopersicum]
          Length = 1824

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
 Frame = +2

Query: 2    AFQGDQWEV-TGNFFHLKYLLIDESDLRFWSFSRHRYFRKLVCLQLYRCPYLEDIPHQFG 178
            AF+GD WEV    F  LKYL +D   +  WS S    F KL  L L +C +LE IP +F 
Sbjct: 1712 AFEGDHWEVKDSEFLELKYLKLDNLKVVQWSISDDA-FPKLEHLVLTKCKHLEKIPSRFE 1770

Query: 179  YSSKLELLEVDGGNEFLVKAAESILEEQHDIWVTNPF 289
             +  L  +EV+  N  +  +A+ I   QH++   + F
Sbjct: 1771 DAVCLNRVEVNWCNWNVANSAQDIQTMQHEVIANDSF 1807


>gb|AAF76312.1|AF220603_4 Prf [Solanum lycopersicum]
          Length = 1825

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
 Frame = +2

Query: 2    AFQGDQWEV-TGNFFHLKYLLIDESDLRFWSFSRHRYFRKLVCLQLYRCPYLEDIPHQFG 178
            AF+GD WEV    F  LKYL +D   +  WS S    F KL  L L +C +LE IP +F 
Sbjct: 1713 AFEGDHWEVKDSEFLELKYLKLDNLKVVQWSISDDA-FPKLEHLVLTKCKHLEKIPSRFE 1771

Query: 179  YSSKLELLEVDGGNEFLVKAAESILEEQHDIWVTNPF 289
             +  L  +EV+  N  +  +A+ I   QH++   + F
Sbjct: 1772 DAVCLNRVEVNWCNWNVANSAQDIQTMQHEVIANDSF 1808


>gb|AAF76308.1| Prf [Solanum pimpinellifolium]
          Length = 1824

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
 Frame = +2

Query: 2    AFQGDQWEV-TGNFFHLKYLLIDESDLRFWSFSRHRYFRKLVCLQLYRCPYLEDIPHQFG 178
            AF+GD WEV    F  LKYL +D   +  WS S    F KL  L L +C +LE IP +F 
Sbjct: 1712 AFEGDHWEVKDSEFLELKYLKLDNLKVVQWSISDDA-FPKLEHLVLTKCKHLEKIPSRFE 1770

Query: 179  YSSKLELLEVDGGNEFLVKAAESILEEQHDIWVTNPF 289
             +  L  +EV+  N  +  +A+ I   QH++   + F
Sbjct: 1771 DAVCLNRVEVNWCNWNVANSAQDIQTMQHEVIANDSF 1807


Top