BLASTX nr result

ID: Scutellaria24_contig00007368 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00007368
         (1150 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267276.1| PREDICTED: ras-related protein RABC2a [Vitis...   357   2e-96
ref|NP_568121.1| RAB GTPase-C2A [Arabidopsis thaliana] gi|297810...   350   5e-94
ref|XP_003535201.1| PREDICTED: ras-related protein RABC2a-like [...   348   1e-93
ref|XP_003542568.1| PREDICTED: ras-related protein RABC2a-like [...   347   3e-93
gb|AFK40035.1| unknown [Medicago truncatula]                          345   1e-92

>ref|XP_002267276.1| PREDICTED: ras-related protein RABC2a [Vitis vinifera]
           gi|297739985|emb|CBI30167.3| unnamed protein product
           [Vitis vinifera]
          Length = 211

 Score =  357 bits (917), Expect = 2e-96
 Identities = 179/211 (84%), Positives = 192/211 (90%)
 Frame = -3

Query: 956 MGSSGQGQSNYDLSFKILLIGDSAVGKSSLLVSFISNVVDDLSPTVGVDFKIKFLTVAGK 777
           MGSS    S+YDLSFKILLIGDSAVGKSSLLVSFIS+ V+DL+PT+GVDFKIK LTV GK
Sbjct: 1   MGSSSGQSSSYDLSFKILLIGDSAVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGK 60

Query: 776 RLKLTIWDTAGQERFRTLTSSYYRGAHGIILVYDVTRRDTFTNLSDVWAKELELYSTNDD 597
           RLKLTIWDTAGQERFRTLTSSYYRGA GIILVYDVTRR++FTNLSDVWAKE+ELYSTN D
Sbjct: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRESFTNLSDVWAKEVELYSTNQD 120

Query: 596 CIKMLVGNKVDRESERAVSREEGLTLAKELGCLFLECSARTRENVEQCFEELALKIMEVP 417
           C+KMLVGNKVDRESER VSREEG+ LAKE GCLF ECSA+TRENVE+CFEELALKIMEVP
Sbjct: 121 CVKMLVGNKVDRESERVVSREEGIALAKEHGCLFFECSAKTRENVEKCFEELALKIMEVP 180

Query: 416 RLLEEGSTVVKRNILKQKQEQQTPPSGGCCS 324
            LLEEGSTV KRNILK K E Q PP+GGCCS
Sbjct: 181 SLLEEGSTVGKRNILKPKPENQPPPTGGCCS 211


>ref|NP_568121.1| RAB GTPase-C2A [Arabidopsis thaliana]
           gi|297810433|ref|XP_002873100.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|75098916|sp|O49841.1|RAC2A_ARATH RecName:
           Full=Ras-related protein RABC2a; Short=AtRABC2a;
           AltName: Full=Ras-related protein Rab18B; Short=AtRab18B
           gi|2723477|dbj|BAA24074.1| GTP-binding protein
           [Arabidopsis thaliana] gi|7378638|emb|CAB83314.1| AtRab
           GTP-binding protein [Arabidopsis thaliana]
           gi|26453054|dbj|BAC43603.1| putative AtRab GTP-binding
           protein [Arabidopsis thaliana]
           gi|29824251|gb|AAP04086.1| unknown protein [Arabidopsis
           thaliana] gi|297318937|gb|EFH49359.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|332003236|gb|AED90619.1| RAB GTPase-C2A [Arabidopsis
           thaliana]
          Length = 210

 Score =  350 bits (897), Expect = 5e-94
 Identities = 176/211 (83%), Positives = 189/211 (89%)
 Frame = -3

Query: 956 MGSSGQGQSNYDLSFKILLIGDSAVGKSSLLVSFISNVVDDLSPTVGVDFKIKFLTVAGK 777
           MGSS  GQS YDLSFKILLIGDS VGKSSLLVSFIS+ V+DL+PT+GVDFKIK LTV GK
Sbjct: 1   MGSSS-GQSGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGK 59

Query: 776 RLKLTIWDTAGQERFRTLTSSYYRGAHGIILVYDVTRRDTFTNLSDVWAKELELYSTNDD 597
           RLKLTIWDTAGQERFRTLTSSYYRGA GIILVYDVTRR+TFTNL DVW KE+ELYSTN +
Sbjct: 60  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQE 119

Query: 596 CIKMLVGNKVDRESERAVSREEGLTLAKELGCLFLECSARTRENVEQCFEELALKIMEVP 417
           C++MLVGNKVDRESER VSREEG+ LAKEL C+FLECSARTR+NVEQCFEELALKIMEVP
Sbjct: 120 CVRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEVP 179

Query: 416 RLLEEGSTVVKRNILKQKQEQQTPPSGGCCS 324
            LLEEGS+ VKRNILKQK E QT    GCCS
Sbjct: 180 SLLEEGSSAVKRNILKQKPEHQTNTQSGCCS 210


>ref|XP_003535201.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
          Length = 212

 Score =  348 bits (893), Expect = 1e-93
 Identities = 175/212 (82%), Positives = 190/212 (89%), Gaps = 1/212 (0%)
 Frame = -3

Query: 956 MGSSGQGQSNYDLSFKILLIGDSAVGKSSLLVSFISNVVDDLSPTVGVDFKIKFLTVAGK 777
           M SS    S YDLSFKILLIGDSAVGKSSLLVSFISN  +D++PT+GVDFKIK LTV GK
Sbjct: 1   MNSSSGQSSGYDLSFKILLIGDSAVGKSSLLVSFISNSAEDIAPTIGVDFKIKMLTVGGK 60

Query: 776 RLKLTIWDTAGQERFRTLTSSYYRGAHGIILVYDVTRRDTFTNLSDVWAKELELYSTNDD 597
           RLKLTIWDTAGQERFRTLTSSYYRGA GIILVYDVTRRDTFTNLS+VW+KE+ELYSTN +
Sbjct: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRDTFTNLSEVWSKEVELYSTNQN 120

Query: 596 CIKMLVGNKVDRESERAVSREEGLTLAKELGCLFLECSARTRENVEQCFEELALKIMEVP 417
           C+KMLVGNKVDR+SER VS+EEGL LA+ELGCLF ECSA+TRENVE+CFEELALKIMEVP
Sbjct: 121 CVKMLVGNKVDRDSERVVSKEEGLALAEELGCLFFECSAKTRENVERCFEELALKIMEVP 180

Query: 416 RLLEEGSTVVKRNILKQKQEQ-QTPPSGGCCS 324
            LLEEGST VKRNILKQ+QEQ Q    GGCCS
Sbjct: 181 SLLEEGSTAVKRNILKQQQEQPQASEFGGCCS 212


>ref|XP_003542568.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
          Length = 211

 Score =  347 bits (890), Expect = 3e-93
 Identities = 173/211 (81%), Positives = 188/211 (89%)
 Frame = -3

Query: 956 MGSSGQGQSNYDLSFKILLIGDSAVGKSSLLVSFISNVVDDLSPTVGVDFKIKFLTVAGK 777
           M SS    S YDLSFKILLIGDSAVGKSSLLVSFISN  +D++PT+GVDFKIK LTV GK
Sbjct: 1   MSSSSGQSSGYDLSFKILLIGDSAVGKSSLLVSFISNSAEDIAPTIGVDFKIKMLTVGGK 60

Query: 776 RLKLTIWDTAGQERFRTLTSSYYRGAHGIILVYDVTRRDTFTNLSDVWAKELELYSTNDD 597
           RLKLTIWDTAGQERFRTLTSSYYRGA GIILVYDVTRRDTFTNLS VW+KE+ELYSTN +
Sbjct: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRDTFTNLSLVWSKEVELYSTNQN 120

Query: 596 CIKMLVGNKVDRESERAVSREEGLTLAKELGCLFLECSARTRENVEQCFEELALKIMEVP 417
           C+KMLVGNKVDR+SER VS+EEGL LA+ELGCLF ECSA+TRENVE+CFEELALKIMEVP
Sbjct: 121 CVKMLVGNKVDRDSERVVSKEEGLALAEELGCLFFECSAKTRENVERCFEELALKIMEVP 180

Query: 416 RLLEEGSTVVKRNILKQKQEQQTPPSGGCCS 324
            LLEEGST VKRNILKQ+Q+ Q    GGCCS
Sbjct: 181 SLLEEGSTAVKRNILKQQQQPQASEFGGCCS 211


>gb|AFK40035.1| unknown [Medicago truncatula]
          Length = 214

 Score =  345 bits (885), Expect = 1e-92
 Identities = 174/211 (82%), Positives = 192/211 (90%), Gaps = 2/211 (0%)
 Frame = -3

Query: 950 SSGQGQSN-YDLSFKILLIGDSAVGKSSLLVSFISNV-VDDLSPTVGVDFKIKFLTVAGK 777
           SSG GQS+ +DLSFKILLIGDS VGKS LLV+FISN  V+DLSPT+GVDFKIK LTV GK
Sbjct: 4   SSGSGQSSGHDLSFKILLIGDSGVGKSCLLVTFISNSSVEDLSPTIGVDFKIKMLTVGGK 63

Query: 776 RLKLTIWDTAGQERFRTLTSSYYRGAHGIILVYDVTRRDTFTNLSDVWAKELELYSTNDD 597
           RLKLTIWDTAGQERFRTLTSSYYRGA GIILVYDVTRR+TFTNLS+VW+KELELYSTN +
Sbjct: 64  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSEVWSKELELYSTNQE 123

Query: 596 CIKMLVGNKVDRESERAVSREEGLTLAKELGCLFLECSARTRENVEQCFEELALKIMEVP 417
           C+KMLVGNKVD++SERAVSREEGL+LAKELGCL LECSA+TRENVE+CFEELALKIME P
Sbjct: 124 CVKMLVGNKVDKDSERAVSREEGLSLAKELGCLLLECSAKTRENVEKCFEELALKIMEAP 183

Query: 416 RLLEEGSTVVKRNILKQKQEQQTPPSGGCCS 324
            LLEEGS   KRN+LKQKQE Q+  +GGCCS
Sbjct: 184 SLLEEGSAATKRNVLKQKQEPQSSQNGGCCS 214


Top