BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00007061
         (1480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273255.1| PREDICTED: pentatricopeptide repeat-containi...   528   e-147
ref|XP_002326162.1| predicted protein [Populus trichocarpa] gi|2...   486   e-135
ref|XP_002525196.1| pentatricopeptide repeat-containing protein,...   485   e-134
dbj|BAC42187.2| unknown protein [Arabidopsis thaliana]                468   e-129
ref|NP_195903.2| pentatricopeptide repeat-containing protein [Ar...   466   e-129

>ref|XP_002273255.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
            chloroplastic [Vitis vinifera]
            gi|297741486|emb|CBI32618.3| unnamed protein product
            [Vitis vinifera]
          Length = 842

 Score =  528 bits (1361), Expect = e-147
 Identities = 283/475 (59%), Positives = 350/475 (73%), Gaps = 29/475 (6%)
 Frame = +3

Query: 3    VFADAKMWKQALEIKEDMVSSGVTPNTVAWSSLISASANAGLVEQAIILFDEMLQAGCQP 182
            VFADAK+W+ AL+IKEDM+S+GV PNTV WS+LIS+ ANAG+ EQAI LF EML AGC+P
Sbjct: 361  VFADAKLWQMALKIKEDMLSAGVIPNTVTWSALISSCANAGITEQAIQLFKEMLLAGCEP 420

Query: 183  NSQCFNTLLHACVEDCQFDRAFRLFECWKERRF--ITDDNLN------SADKFAAVAQMK 338
            NSQC+N LLHACVE CQ+DRAFRLF+ WK+ RF  I+    N             +  M 
Sbjct: 421  NSQCYNILLHACVEACQYDRAFRLFQSWKDSRFQEISGGTGNGNTVGVELKHQNCITSMP 480

Query: 339  VPLRQYSRLTM--RVPFTPTTSTYNIMMKACGTDHYRAEALMDEMKTFGLSPNRISWSIL 512
              L     L+     PFTPTT+TYNI+MKACGTD+YRA+ALMDEMKT GLSPN ISWSIL
Sbjct: 481  NCLSNSHHLSFSKSFPFTPTTTTYNILMKACGTDYYRAKALMDEMKTAGLSPNHISWSIL 540

Query: 513  MDVYGGSGNVRGAIQILRFMRESGVEPDVIAYTTAIKICVEIKLPKLAFLIFREMKKYQI 692
            +D+ GG+GN+ GA++IL+ MRE+G++PDV+AYTTAIK CVE K  K+AF +F EMK+YQI
Sbjct: 541  IDICGGTGNIVGAVRILKTMREAGIKPDVVAYTTAIKYCVESKNLKIAFSLFAEMKRYQI 600

Query: 693  KPNMVTYNTILRARSRKGSLKEVQQCLDVYQHMRKAGYKPNDNYLKQLLEDWCEGVIQIE 872
            +PN+VTYNT+LRARSR GSL EVQQCL +YQHMRKAGYK ND YLK+L+E+WCEGVIQ  
Sbjct: 601  QPNLVTYNTLLRARSRYGSLHEVQQCLAIYQHMRKAGYKSNDYYLKELIEEWCEGVIQDN 660

Query: 873  HRNKSQF-AYPTSDFGH-QNLLLEKVAEHLQDSNAESLSIDLRGLTMVEARIVVLAVLRR 1046
            + N+S+F +   +D+G  Q+LLLEKVA HLQ S AESL+IDL+GLT VEARIVVLAVLR 
Sbjct: 661  NLNQSKFSSVNRADWGRPQSLLLEKVAAHLQKSVAESLAIDLQGLTQVEARIVVLAVLRM 720

Query: 1047 IKEKCNAGNPIKDDLSIILGQQQLDARLTKYESGITEAVIQLLQHDLGLQVT-------- 1202
            IKE    G+PIKDD+ IILG +++DA L ++ES +  A+I+LLQ +LGL+V         
Sbjct: 721  IKENYILGHPIKDDILIILGIKKVDANLVEHESPVKGAIIKLLQDELGLEVAFAGPKIAL 780

Query: 1203 ---------AGKDMGSEEVDERSSLQEASESPTRRPIFLQRLIISRESLLHWLQR 1340
                      G D   +E   R+ L    ES TRRP  LQR  ++R+SL HWLQR
Sbjct: 781  DKRINLGGPPGSDPDWQEALGRNRLPTELESSTRRPAVLQRFKVTRKSLDHWLQR 835


>ref|XP_002326162.1| predicted protein [Populus trichocarpa] gi|222833355|gb|EEE71832.1|
            predicted protein [Populus trichocarpa]
          Length = 828

 Score =  486 bits (1252), Expect = e-135
 Identities = 262/459 (57%), Positives = 334/459 (72%), Gaps = 13/459 (2%)
 Frame = +3

Query: 3    VFADAKMWKQALEIKEDMVSSGVTPNTVAWSSLISASANAGLVEQAIILFDEMLQAGCQP 182
            +FADAKMW+ AL+IKEDM+SSGVTPN   WSSLISA ANAGLVEQAI LF+EML +GC+P
Sbjct: 373  IFADAKMWQMALKIKEDMLSSGVTPNMHIWSSLISACANAGLVEQAIQLFEEMLLSGCKP 432

Query: 183  NSQCFNTLLHACVEDCQFDRAFRLFECWK----ERRFITD-----DNLNSADKFAAVAQM 335
            NSQC N LLHACV+ CQ+DRAFRLF+CWK    +  F  D     D +  A K       
Sbjct: 433  NSQCCNILLHACVQACQYDRAFRLFQCWKGSEAQEVFHGDHSGNADEIEHAQKHCPNMTT 492

Query: 336  KVPLRQYSRLTMRVPFTPTTSTYNIMMKACGTDHYRAEALMDEMKTFGLSPNRISWSILM 515
             VP   +     + PFTPT +TY+++MKACG+D++RA+ALMDEMKT G+SPN ISWSIL+
Sbjct: 493  IVPNSHHLNFIKKFPFTPTPATYHMLMKACGSDYHRAKALMDEMKTVGISPNHISWSILI 552

Query: 516  DVYGGSGNVRGAIQILRFMRESGVEPDVIAYTTAIKICVEIKLPKLAFLIFREMKKYQIK 695
            D+ G SGNV GA+QIL+ MR +GVEPDV+AYTTAIK+CVE K  KLAF +F EMK+ QI 
Sbjct: 553  DICGVSGNVSGAVQILKNMRMAGVEPDVVAYTTAIKVCVETKNLKLAFSLFAEMKRCQIN 612

Query: 696  PNMVTYNTILRARSRKGSLKEVQQCLDVYQHMRKAGYKPNDNYLKQLLEDWCEGVIQIEH 875
            PN+VTYNT+LRAR+R GSL+EVQQCL +YQ MRKAGYK ND YLKQL+E+WCEGVIQ  +
Sbjct: 613  PNLVTYNTLLRARTRYGSLREVQQCLAIYQDMRKAGYKSNDYYLKQLIEEWCEGVIQDNN 672

Query: 876  RNKSQFA-YPTSDFGH-QNLLLEKVAEHLQDSNAESLSIDLRGLTMVEARIVVLAVLRRI 1049
            + +  FA    +D G  ++LLLEKVA HLQ++ +E+L+IDL+GLT VEARIVVLAVLR I
Sbjct: 673  QIQGGFASCKRTDLGRPRSLLLEKVAAHLQNNISENLAIDLQGLTKVEARIVVLAVLRMI 732

Query: 1050 KEKCNAGNPIKDDLSIILGQQQLDARLTKYESGITEAVIQLLQHDLGLQVTAGKDMGSEE 1229
            KE    G  +K+D+ I L   ++D   +K +S +  A+I+LL+++LGL+V        ++
Sbjct: 733  KENYTLGYSVKEDMWITLDVSKVDP-ASKRDSEVKNAIIELLRNELGLEVLVAVPGHLDD 791

Query: 1230 V--DERSSLQEASESPTRRPIFLQRLIISRESLLHWLQR 1340
            +  D +SSL          P+  QRL + R+SL  WLQR
Sbjct: 792  IKTDSKSSLD---------PVVTQRLKVRRKSLHEWLQR 821


>ref|XP_002525196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223535493|gb|EEF37162.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 786

 Score =  485 bits (1248), Expect = e-134
 Identities = 266/475 (56%), Positives = 337/475 (70%), Gaps = 29/475 (6%)
 Frame = +3

Query: 3    VFADAKMWKQALEIKEDMVSSGVTPNTVAWSSLISASANAGLVEQAIILFDEMLQAGCQP 182
            +FADAK+W+ AL+IKEDM+SSGVTPNT  WSSLISASANAGLV+QAI LF+EML AGC P
Sbjct: 305  IFADAKLWQLALKIKEDMLSSGVTPNTFTWSSLISASANAGLVDQAIKLFEEMLLAGCVP 364

Query: 183  NSQCFNTLLHACVEDCQFDRAFRLFECWK----ERRFITD-----DNLNSADKFAAVAQM 335
            NS C N LLHACVE CQ+DRAFRLF  WK    +  F TD     D+++SA        +
Sbjct: 365  NSHCCNILLHACVEACQYDRAFRLFNAWKGSEIQNTFTTDYNCPVDDISSAMHACEDYII 424

Query: 336  KVPLRQYSRLTM----RVPFTPTTSTYNIMMKACGTDHYRAEALMDEMKTFGLSPNRISW 503
             VP    + L +    + PFTP+++TYN +MKACG+D+ RA+ALMDEM+  GLSPN ISW
Sbjct: 425  TVPNLASNSLHLSFLKKFPFTPSSATYNTLMKACGSDYNRAKALMDEMQAVGLSPNHISW 484

Query: 504  SILMDVYGGSGNVRGAIQILRFMRESGVEPDVIAYTTAIKICVEIKLPKLAFLIFREMKK 683
            SIL+D+ G SGN+ GAIQIL+ MR +G+EPDVIAYTTAIK+ VE K  K+AF +F EMK+
Sbjct: 485  SILIDICGSSGNMEGAIQILKNMRMAGIEPDVIAYTTAIKVSVESKNLKMAFSLFAEMKR 544

Query: 684  YQIKPNMVTYNTILRARSRKGSLKEVQQCLDVYQHMRKAGYKPNDNYLKQLLEDWCEGVI 863
            YQ+KPN+VTY+T+LRAR+R GSLKEVQQCL +YQ MRKAGYK NDNYLKQL+E+WCEGVI
Sbjct: 545  YQLKPNLVTYDTLLRARTRYGSLKEVQQCLAIYQDMRKAGYKSNDNYLKQLIEEWCEGVI 604

Query: 864  QIEHRNKSQF-AYPTSDFGH-QNLLLEKVAEHLQDSNAESLSIDLRGLTMVEARIVVLAV 1037
            Q   + +  F     ++FG   +LLLEKVA HL  + AESLS+DL+GLT VEARIVVLAV
Sbjct: 605  QDNDQCQDDFKPCKRAEFGRPHSLLLEKVAAHLHHNVAESLSVDLQGLTKVEARIVVLAV 664

Query: 1038 LRRIKEKCNAGNPIKDDLSIILGQQQLDARLTKYESGITEAVIQLLQHDLGLQV------ 1199
            LR +KE    G+ +KDD+SI LG  ++D      ++ + +A+ +LL ++LGL+V      
Sbjct: 665  LRMVKENYIQGHLVKDDMSITLGIDKVDVLPATQKAEVKDAIFKLLHNELGLEVLIVVPR 724

Query: 1200 -TAGKDMGSE-------EVDERSSLQEASESPTRRPIFLQRLIISRESLLHWLQR 1340
             TA  +   E          + S  +    S  RRP+ LQRL ++R SL  WLQR
Sbjct: 725  YTADLETDLEIPLNSYQNWSKSSGRENIRVSSARRPLVLQRLKVTRNSLHSWLQR 779


>dbj|BAC42187.2| unknown protein [Arabidopsis thaliana]
          Length = 852

 Score =  468 bits (1203), Expect = e-129
 Identities = 246/468 (52%), Positives = 327/468 (69%), Gaps = 22/468 (4%)
 Frame = +3

Query: 3    VFADAKMWKQALEIKEDMVSSGVTPNTVAWSSLISASANAGLVEQAIILFDEMLQAGCQP 182
            VFADAKMWK AL++K+DM S GVTPNT  WSSLISA ANAGLVEQA  LF+EML +GC+P
Sbjct: 383  VFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEP 442

Query: 183  NSQCFNTLLHACVEDCQFDRAFRLFECWKE---RRFITDDNLNSADKFAAVAQMKV---- 341
            NSQCFN LLHACVE CQ+DRAFRLF+ WK       +  D++ S  + ++   +K     
Sbjct: 443  NSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNGPG 502

Query: 342  ------PLRQYSRLTMRVPFTPTTSTYNIMMKACGTDHYRAEALMDEMKTFGLSPNRISW 503
                      Y + + R  F PTT+TYNI++KACGTD+YR + LMDEMK+ GLSPN+I+W
Sbjct: 503  SLVNRNSNSPYIQASKRFCFKPTTATYNILLKACGTDYYRGKELMDEMKSLGLSPNQITW 562

Query: 504  SILMDVYGGSGNVRGAIQILRFMRESGVEPDVIAYTTAIKICVEIKLPKLAFLIFREMKK 683
            S L+D+ GGSG+V GA++ILR M  +G  PDV+AYTTAIKIC E K  KLAF +F EM++
Sbjct: 563  STLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRR 622

Query: 684  YQIKPNMVTYNTILRARSRKGSLKEVQQCLDVYQHMRKAGYKPNDNYLKQLLEDWCEGVI 863
            YQIKPN VTYNT+L+ARS+ GSL EV+QCL +YQ MR AGYKPND++LK+L+E+WCEGVI
Sbjct: 623  YQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIEEWCEGVI 682

Query: 864  QIEHRNKSQFAYPTSDFGHQ--NLLLEKVAEHLQDSNAESLSIDLRGLTMVEARIVVLAV 1037
            Q   R++ + +    D   +  +LL+EKVA H+Q+  A +L+IDL+GLT +EAR+VVLAV
Sbjct: 683  QENGRSQDKISDQEGDNAGRPVSLLIEKVATHMQERTAGNLAIDLQGLTKIEARLVVLAV 742

Query: 1038 LRRIKEKCNAGNPIKDDLSIILGQQQLDARLTKYESGITEAVIQLLQHDLGLQVTAGKDM 1217
            LR IKE    G+ + DD+ II+G  + +    K E  + EA+++LL+ +L L V      
Sbjct: 743  LRMIKEDYMRGDVVIDDVLIIIGTDEANTVSGKQEITVQEALVKLLRDELSLVVLPAGQR 802

Query: 1218 G-------SEEVDERSSLQEASESPTRRPIFLQRLIISRESLLHWLQR 1340
                     ++ D+ ++    S S TRRP  L+RL++++ SL  WLQR
Sbjct: 803  NIIQDAHCVDDADQENTKSFVSISSTRRPAILERLMVTKASLYQWLQR 850


>ref|NP_195903.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|332278227|sp|Q8GYL7.3|PP361_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At5g02830, chloroplastic; Flags: Precursor
            gi|332003140|gb|AED90523.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 852

 Score =  466 bits (1199), Expect = e-129
 Identities = 245/468 (52%), Positives = 327/468 (69%), Gaps = 22/468 (4%)
 Frame = +3

Query: 3    VFADAKMWKQALEIKEDMVSSGVTPNTVAWSSLISASANAGLVEQAIILFDEMLQAGCQP 182
            VFADAKMWK AL++K+DM S GVTPNT  WSSLISA ANAGLVEQA  LF+EML +GC+P
Sbjct: 383  VFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEP 442

Query: 183  NSQCFNTLLHACVEDCQFDRAFRLFECWKE---RRFITDDNLNSADKFAAVAQMKV---- 341
            NSQCFN LLHACVE CQ+DRAFRLF+ WK       +  D++ S  + ++   +K     
Sbjct: 443  NSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNGPG 502

Query: 342  ------PLRQYSRLTMRVPFTPTTSTYNIMMKACGTDHYRAEALMDEMKTFGLSPNRISW 503
                      Y + + R  F PTT+TYNI++KACGTD+YR + LMDEMK+ GLSPN+I+W
Sbjct: 503  SLVNRNSNSPYIQASKRFCFKPTTATYNILLKACGTDYYRGKELMDEMKSLGLSPNQITW 562

Query: 504  SILMDVYGGSGNVRGAIQILRFMRESGVEPDVIAYTTAIKICVEIKLPKLAFLIFREMKK 683
            S L+D+ GGSG+V GA++ILR M  +G  PDV+AYTTAIKIC E K  KLAF +F EM++
Sbjct: 563  STLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRR 622

Query: 684  YQIKPNMVTYNTILRARSRKGSLKEVQQCLDVYQHMRKAGYKPNDNYLKQLLEDWCEGVI 863
            YQIKPN VTYNT+L+ARS+ GSL EV+QCL +YQ MR AGYKPND++LK+L+E+WCEGVI
Sbjct: 623  YQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIEEWCEGVI 682

Query: 864  QIEHRNKSQFAYPTSDFGHQ--NLLLEKVAEHLQDSNAESLSIDLRGLTMVEARIVVLAV 1037
            Q   +++ + +    D   +  +LL+EKVA H+Q+  A +L+IDL+GLT +EAR+VVLAV
Sbjct: 683  QENGQSQDKISDQEGDNAGRPVSLLIEKVATHMQERTAGNLAIDLQGLTKIEARLVVLAV 742

Query: 1038 LRRIKEKCNAGNPIKDDLSIILGQQQLDARLTKYESGITEAVIQLLQHDLGLQVTAGKDM 1217
            LR IKE    G+ + DD+ II+G  + +    K E  + EA+++LL+ +L L V      
Sbjct: 743  LRMIKEDYMRGDVVIDDVLIIIGTDEANTVSGKQEITVQEALVKLLRDELSLVVLPAGQR 802

Query: 1218 G-------SEEVDERSSLQEASESPTRRPIFLQRLIISRESLLHWLQR 1340
                     ++ D+ ++    S S TRRP  L+RL++++ SL  WLQR
Sbjct: 803  NIIQDAHCVDDADQENTKSFVSISSTRRPAILERLMVTKASLYQWLQR 850