BLASTX nr result

ID: Scutellaria24_contig00007056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00007056
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315672.1| ABC transporter family protein [Populus tric...   170   2e-40
ref|XP_002527927.1| abc transporter, putative [Ricinus communis]...   169   4e-40
ref|NP_177218.3| ABC transporter B family member 26 [Arabidopsis...   168   9e-40
ref|XP_002887316.1| ATTAP1 [Arabidopsis lyrata subsp. lyrata] gi...   165   6e-39
ref|XP_003517500.1| PREDICTED: ABC transporter B family member 2...   164   9e-39

>ref|XP_002315672.1| ABC transporter family protein [Populus trichocarpa]
           gi|222864712|gb|EEF01843.1| ABC transporter family
           protein [Populus trichocarpa]
          Length = 797

 Score =  170 bits (430), Expect = 2e-40
 Identities = 78/109 (71%), Positives = 93/109 (85%)
 Frame = -1

Query: 329 FVREILPGGDWWSLSGEVEDVFSAKPVTVFRALKKMWDLIAQDRWVIFTAFVALIVTALS 150
           F+  ILPGG+WWS S E +    AKPVTV+RAL +MW L+AQDRWVIF AF ALIV ALS
Sbjct: 110 FLPSILPGGNWWSFSDEADIKIMAKPVTVWRALTRMWHLVAQDRWVIFAAFTALIVAALS 169

Query: 149 EISIPHYLTASIFSAQSSTIALFHQNVRLLVVLCIIAGICSGVRGCLFG 3
           EISIPH+LTASIFSAQ++T+A+FH+NVRLLV LC++AGICSG+RGC FG
Sbjct: 170 EISIPHFLTASIFSAQTATVAVFHRNVRLLVALCVVAGICSGIRGCCFG 218


>ref|XP_002527927.1| abc transporter, putative [Ricinus communis]
           gi|223532702|gb|EEF34484.1| abc transporter, putative
           [Ricinus communis]
          Length = 684

 Score =  169 bits (428), Expect = 4e-40
 Identities = 95/204 (46%), Positives = 129/204 (63%), Gaps = 9/204 (4%)
 Frame = -1

Query: 587 MALSLCNFYPLPPFPVELRH---SPIKTRSSNPHFNQRKAQFQ-FFAPCRRFRHIKSASV 420
           MAL LCN  P     +  +    S +  RS+  + +  + + +  F P        ++S+
Sbjct: 1   MALLLCNTNPRLFSSLNYKQQQKSSLNIRSAIRYSSPPRTKLRRLFYPLNCSSSSSASSI 60

Query: 419 NGYPLTKEDEISLTGXXXXXXXXXXXXXXK-----FVREILPGGDWWSLSGEVEDVFSAK 255
           NGY ++++++    G                    F+  ILPGG+WWS S +VE  + AK
Sbjct: 61  NGYLISEDNDNEYEGEDEERGENYELHERIRKFFEFLPSILPGGNWWSFSEDVEMKYLAK 120

Query: 254 PVTVFRALKKMWDLIAQDRWVIFTAFVALIVTALSEISIPHYLTASIFSAQSSTIALFHQ 75
           PVT+++AL +MW L+AQDRWVIF AF ALIV ALSEISIPH+LTASIFSAQS+ IA+FH+
Sbjct: 121 PVTIWKALGRMWQLVAQDRWVIFFAFSALIVAALSEISIPHFLTASIFSAQSTQIAVFHR 180

Query: 74  NVRLLVVLCIIAGICSGVRGCLFG 3
           NVRLLV+LC+IAGI SG+RGC FG
Sbjct: 181 NVRLLVLLCVIAGISSGLRGCCFG 204


>ref|NP_177218.3| ABC transporter B family member 26 [Arabidopsis thaliana]
           gi|75330788|sp|Q8RY46.1|AB26B_ARATH RecName: Full=ABC
           transporter B family member 26, chloroplastic; Short=ABC
           transporter ABCB.26; Short=AtABCB26; AltName:
           Full=Antigen peptide transporter-like 1; AltName:
           Full=Transporter associated with antigen processing-like
           protein 1; Short=AtTAP1; Flags: Precursor
           gi|19335722|gb|AAL85485.1| transporter associated with
           antigen processing-like protein [Arabidopsis thaliana]
           gi|110737412|dbj|BAF00650.1| transporter associated with
           antigen processing-like protein [Arabidopsis thaliana]
           gi|332196967|gb|AEE35088.1| ABC transporter B family
           member 26 [Arabidopsis thaliana]
          Length = 700

 Score =  168 bits (425), Expect = 9e-40
 Identities = 77/109 (70%), Positives = 92/109 (84%)
 Frame = -1

Query: 329 FVREILPGGDWWSLSGEVEDVFSAKPVTVFRALKKMWDLIAQDRWVIFTAFVALIVTALS 150
           F+R ILPGG WWS S EV+  F AKPVTV+RAL +MW+L+A+DRWVIF AF  LIV ALS
Sbjct: 93  FLRTILPGGSWWSFSDEVDGRFIAKPVTVWRALSRMWELVAEDRWVIFAAFSTLIVAALS 152

Query: 149 EISIPHYLTASIFSAQSSTIALFHQNVRLLVVLCIIAGICSGVRGCLFG 3
           EI+IPH+LTASIFSAQS  IA+FH+NV+LLV LC+ +GICSG+RGC FG
Sbjct: 153 EITIPHFLTASIFSAQSGDIAVFHRNVKLLVTLCVTSGICSGIRGCFFG 201


>ref|XP_002887316.1| ATTAP1 [Arabidopsis lyrata subsp. lyrata]
           gi|297333157|gb|EFH63575.1| ATTAP1 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 700

 Score =  165 bits (418), Expect = 6e-39
 Identities = 76/109 (69%), Positives = 91/109 (83%)
 Frame = -1

Query: 329 FVREILPGGDWWSLSGEVEDVFSAKPVTVFRALKKMWDLIAQDRWVIFTAFVALIVTALS 150
           F+R ILPGG WWS S EV+  F AKPVTV+RAL +MW+L+A+DRWVIF AF  LIV ALS
Sbjct: 93  FIRTILPGGSWWSFSDEVDGRFIAKPVTVWRALTRMWELVAEDRWVIFAAFSTLIVAALS 152

Query: 149 EISIPHYLTASIFSAQSSTIALFHQNVRLLVVLCIIAGICSGVRGCLFG 3
           EI+IPH+LTASIFSAQS  IA+F +NV+LLV LC+ +GICSG+RGC FG
Sbjct: 153 EITIPHFLTASIFSAQSGDIAVFRRNVKLLVTLCVTSGICSGIRGCFFG 201


>ref|XP_003517500.1| PREDICTED: ABC transporter B family member 26, chloroplastic-like
           [Glycine max]
          Length = 701

 Score =  164 bits (416), Expect = 9e-39
 Identities = 76/109 (69%), Positives = 93/109 (85%)
 Frame = -1

Query: 329 FVREILPGGDWWSLSGEVEDVFSAKPVTVFRALKKMWDLIAQDRWVIFTAFVALIVTALS 150
           F+  ILPGG WW  SG+V+    A+PVTV+RAL KMWDL+A+DRWVIF AF ALIV A+S
Sbjct: 95  FLPSILPGGRWWEFSGDVDVQVVAQPVTVWRALGKMWDLVARDRWVIFAAFSALIVAAVS 154

Query: 149 EISIPHYLTASIFSAQSSTIALFHQNVRLLVVLCIIAGICSGVRGCLFG 3
           EISIPH+LTASIFSAQS+ +A+FH+NVRLLV+LC+ +GICSG+RGC FG
Sbjct: 155 EISIPHFLTASIFSAQSADLAVFHRNVRLLVLLCVASGICSGIRGCFFG 203


Top