BLASTX nr result

ID: Scutellaria24_contig00006957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00006957
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266665.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair p...   139   4e-31
emb|CAN60638.1| hypothetical protein VITISV_022224 [Vitis vinifera]   139   4e-31
ref|XP_004166115.1| PREDICTED: DNA repair protein RAD50-like, pa...   135   5e-30
ref|XP_004133980.1| PREDICTED: DNA repair protein RAD50-like [Cu...   135   5e-30
ref|XP_002300148.1| predicted protein [Populus trichocarpa] gi|2...   128   6e-28

>ref|XP_002266665.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein RAD50-like [Vitis
            vinifera]
          Length = 1316

 Score =  139 bits (349), Expect = 4e-31
 Identities = 78/163 (47%), Positives = 103/163 (63%)
 Frame = +3

Query: 81   LLNIKKAEEDLNHLAEEKSQVELHLKHXXXXXXXXXXXXXXXXXXXXXXVVKLNHEYELQ 260
            L ++KKAEE+L+ L EEKSQV+LH KH                        KL+ EYE Q
Sbjct: 895  LRDVKKAEEELDRLVEEKSQVDLHEKHLAEALGPLSKEKEKLLSDYNDLKAKLDFEYEQQ 954

Query: 261  EDHYRKDQ*EVDILINMFSTIKENDNNCKGDRLKALQEKQSQSEFELNNCGTRLVELMKE 440
             +  R  Q EV+ L+ + S IKE  ++ KG+RLK L+EKQS SE +L +C  R  E++ E
Sbjct: 955  AEQKRNYQQEVEALLKVTSKIKEYYDSKKGERLKELKEKQSLSESQLQSCDARKQEILTE 1014

Query: 441  LEKSRDLCRSQAELRRNIEENLEYRKVKAQVDDLTQEIESLEE 569
            L KS+DL R+Q +L+RNIE+NL YRK KA+VD LT EIE LE+
Sbjct: 1015 LNKSKDLMRNQDQLKRNIEDNLNYRKTKAEVDKLTIEIELLED 1057


>emb|CAN60638.1| hypothetical protein VITISV_022224 [Vitis vinifera]
          Length = 527

 Score =  139 bits (349), Expect = 4e-31
 Identities = 78/163 (47%), Positives = 103/163 (63%)
 Frame = +3

Query: 81  LLNIKKAEEDLNHLAEEKSQVELHLKHXXXXXXXXXXXXXXXXXXXXXXVVKLNHEYELQ 260
           L ++KKAEE+L+ L EEKSQV+LH KH                        KL+ EYE Q
Sbjct: 306 LRDVKKAEEELDRLVEEKSQVDLHEKHLAEALGPLSKEKEKLLSDYNDLKAKLDFEYEQQ 365

Query: 261 EDHYRKDQ*EVDILINMFSTIKENDNNCKGDRLKALQEKQSQSEFELNNCGTRLVELMKE 440
            +  R  Q EV+ L+ + S IKE  ++ KG+RLK L+EKQS SE +L +C  R  E++ E
Sbjct: 366 AEQKRNYQQEVEALLKVTSKIKEYYDSKKGERLKELKEKQSLSESQLQSCDARKQEILTE 425

Query: 441 LEKSRDLCRSQAELRRNIEENLEYRKVKAQVDDLTQEIESLEE 569
           L KS+DL R+Q +L+RNIE+NL YRK KA+VD LT EIE LE+
Sbjct: 426 LNKSKDLMRNQDQLKRNIEDNLNYRKTKAEVDKLTIEIELLED 468


>ref|XP_004166115.1| PREDICTED: DNA repair protein RAD50-like, partial [Cucumis sativus]
          Length = 1088

 Score =  135 bits (340), Expect = 5e-30
 Identities = 77/163 (47%), Positives = 102/163 (62%)
 Frame = +3

Query: 81   LLNIKKAEEDLNHLAEEKSQVELHLKHXXXXXXXXXXXXXXXXXXXXXXVVKLNHEYELQ 260
            L +++KAEE+L+ L EEK QV+L  KH                        KLN EYE  
Sbjct: 667  LRDVRKAEEELDRLTEEKGQVDLDEKHLAEALIPLSKEKDKLLNDYNELKDKLNREYEEL 726

Query: 261  EDHYRKDQ*EVDILINMFSTIKENDNNCKGDRLKALQEKQSQSEFELNNCGTRLVELMKE 440
             D  RK Q EV+ L+   S IKE  +  KG+RLK LQEK++Q+E +L  C +R  E++ E
Sbjct: 727  GDKKRKFQQEVETLLRTTSKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILAE 786

Query: 441  LEKSRDLCRSQAELRRNIEENLEYRKVKAQVDDLTQEIESLEE 569
            L KS+DL R+Q +LRRNIE+NL YRK KA+VD+L ++IESLEE
Sbjct: 787  LNKSKDLMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEE 829


>ref|XP_004133980.1| PREDICTED: DNA repair protein RAD50-like [Cucumis sativus]
          Length = 1316

 Score =  135 bits (340), Expect = 5e-30
 Identities = 77/163 (47%), Positives = 102/163 (62%)
 Frame = +3

Query: 81   LLNIKKAEEDLNHLAEEKSQVELHLKHXXXXXXXXXXXXXXXXXXXXXXVVKLNHEYELQ 260
            L +++KAEE+L+ L EEK QV+L  KH                        KLN EYE  
Sbjct: 895  LRDVRKAEEELDRLTEEKGQVDLDEKHLAEALIPLSKEKDKLLNDYNELKDKLNREYEEL 954

Query: 261  EDHYRKDQ*EVDILINMFSTIKENDNNCKGDRLKALQEKQSQSEFELNNCGTRLVELMKE 440
             D  RK Q EV+ L+   S IKE  +  KG+RLK LQEK++Q+E +L  C +R  E++ E
Sbjct: 955  GDKKRKFQQEVETLLRTTSKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILAE 1014

Query: 441  LEKSRDLCRSQAELRRNIEENLEYRKVKAQVDDLTQEIESLEE 569
            L KS+DL R+Q +LRRNIE+NL YRK KA+VD+L ++IESLEE
Sbjct: 1015 LNKSKDLMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEE 1057


>ref|XP_002300148.1| predicted protein [Populus trichocarpa] gi|222847406|gb|EEE84953.1|
            predicted protein [Populus trichocarpa]
          Length = 1316

 Score =  128 bits (322), Expect = 6e-28
 Identities = 74/164 (45%), Positives = 98/164 (59%)
 Frame = +3

Query: 78   ILLNIKKAEEDLNHLAEEKSQVELHLKHXXXXXXXXXXXXXXXXXXXXXXVVKLNHEYEL 257
            IL ++KK+EE+L  L EEK QVEL  KH                       V+L  EYE 
Sbjct: 894  ILRDVKKSEEELERLVEEKHQVELEEKHLAEAVGPLSREKEKLQGEHNELKVQLEREYEE 953

Query: 258  QEDHYRKDQ*EVDILINMFSTIKENDNNCKGDRLKALQEKQSQSEFELNNCGTRLVELMK 437
            Q+      + EVD L+ + S I+E  N  KG+RLK +QEK S SE +L  C  R  E++ 
Sbjct: 954  QKKQLDNFKQEVDTLVRIASKIREYYNLKKGERLKEMQEKLSLSESQLQGCDARKQEILA 1013

Query: 438  ELEKSRDLCRSQAELRRNIEENLEYRKVKAQVDDLTQEIESLEE 569
            EL  S++  RSQ  LRR+IE+NL YRK+KA+V++LT+EIESLEE
Sbjct: 1014 ELNDSKNAVRSQDNLRRSIEDNLNYRKIKAEVEELTREIESLEE 1057


Top