BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00006853
         (846 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529165.1| DNA-directed RNA polymerase II, putative [Ri...   314   1e-83
emb|CBI30093.3| unnamed protein product [Vitis vinifera]              313   2e-83
ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, I...   313   2e-83
ref|XP_004136650.1| PREDICTED: DNA-directed RNA polymerases I, I...   305   6e-81
ref|NP_001236527.1| uncharacterized protein LOC100306033 [Glycin...   305   1e-80

>ref|XP_002529165.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
           gi|223531389|gb|EEF33224.1| DNA-directed RNA polymerase
           II, putative [Ricinus communis]
          Length = 238

 Score =  314 bits (805), Expect = 1e-83
 Identities = 154/230 (66%), Positives = 189/230 (82%), Gaps = 5/230 (2%)
 Frame = -3

Query: 811 AADGNGVEGEENF-----GSCLSSLIDGGSIESHRYYLARKTVLEMLRDRGFAVPTCEID 647
           A +GNG +  E F     G C SS  D G+ E+HRYYL+R+TVLEMLRDRG++VP+ EID
Sbjct: 9   AVNGNGTDASERFNMEGLGKCFSSYADDGTHETHRYYLSRRTVLEMLRDRGYSVPSSEID 68

Query: 646 VSLPEFRNKHGQMPDVEGLRITALHKDDPSIKVHVIFCGPGIVKVNAVRSIASHIVNKES 467
           +SL EFR  HG  PD++ L+ +A H  DPS ++ V+F GPGI+KV+ +R+IA  IVNK+S
Sbjct: 69  LSLQEFRAIHGPNPDIDRLKFSATHTSDPSKRMLVLFGGPGIIKVSTIRAIAGQIVNKDS 128

Query: 466 LSRLILVVQNKITSQATKALDLFKFKVEIFQITDLLVNITKHELKPKHQVLTDSEKQKLL 287
           L+ LILV+QN+IT+QA KA+DLFKFKVE+FQITDLLVNITKH LKPKHQVLTD EKQKLL
Sbjct: 129 LTGLILVLQNQITNQAMKAVDLFKFKVEMFQITDLLVNITKHVLKPKHQVLTDREKQKLL 188

Query: 286 KKYSIDEKQLPRMLQKDAIVRYYGLEKGQVLKVTYNGELTQLHVTYRCVW 137
           K Y I+EKQLPR+L+KDAI RYYGLEKGQV+KVTY+GE+T+ HVTYRCVW
Sbjct: 189 KDYCIEEKQLPRLLRKDAIARYYGLEKGQVVKVTYSGEITESHVTYRCVW 238


>emb|CBI30093.3| unnamed protein product [Vitis vinifera]
          Length = 330

 Score =  313 bits (803), Expect = 2e-83
 Identities = 156/228 (68%), Positives = 187/228 (82%), Gaps = 5/228 (2%)
 Frame = -3

Query: 805 DGNG-----VEGEENFGSCLSSLIDGGSIESHRYYLARKTVLEMLRDRGFAVPTCEIDVS 641
           DG G     + G+     CLSS +D G IESHRYYLAR+T+LEMLRDRG+++P  +ID+S
Sbjct: 103 DGGGWFDGDLNGDFEVKRCLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDIS 162

Query: 640 LPEFRNKHGQMPDVEGLRITALHKDDPSIKVHVIFCGPGIVKVNAVRSIASHIVNKESLS 461
           L +FR+ + Q PD + LRI+A  + DPS K+ VIFCGP +VKVNA+RSIA+ IVNK+SLS
Sbjct: 163 LQDFRSFYSQKPDPDRLRISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSLS 222

Query: 460 RLILVVQNKITSQATKALDLFKFKVEIFQITDLLVNITKHELKPKHQVLTDSEKQKLLKK 281
           +LILV+QN ITSQA KA+DLF F+VE FQITDLLVNITKH LKPKH+VLTD EK KLLKK
Sbjct: 223 KLILVLQNHITSQALKAVDLFSFQVEKFQITDLLVNITKHVLKPKHRVLTDQEKNKLLKK 282

Query: 280 YSIDEKQLPRMLQKDAIVRYYGLEKGQVLKVTYNGELTQLHVTYRCVW 137
           YS++EKQLPRMLQ+DAI RYYGLEKGQV+KV YNGE+T  HVTYRCVW
Sbjct: 283 YSLNEKQLPRMLQQDAIARYYGLEKGQVVKVIYNGEITGSHVTYRCVW 330


>ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Vitis vinifera]
          Length = 229

 Score =  313 bits (803), Expect = 2e-83
 Identities = 156/228 (68%), Positives = 187/228 (82%), Gaps = 5/228 (2%)
 Frame = -3

Query: 805 DGNG-----VEGEENFGSCLSSLIDGGSIESHRYYLARKTVLEMLRDRGFAVPTCEIDVS 641
           DG G     + G+     CLSS +D G IESHRYYLAR+T+LEMLRDRG+++P  +ID+S
Sbjct: 2   DGGGWFDGDLNGDFEVKRCLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDIS 61

Query: 640 LPEFRNKHGQMPDVEGLRITALHKDDPSIKVHVIFCGPGIVKVNAVRSIASHIVNKESLS 461
           L +FR+ + Q PD + LRI+A  + DPS K+ VIFCGP +VKVNA+RSIA+ IVNK+SLS
Sbjct: 62  LQDFRSFYSQKPDPDRLRISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSLS 121

Query: 460 RLILVVQNKITSQATKALDLFKFKVEIFQITDLLVNITKHELKPKHQVLTDSEKQKLLKK 281
           +LILV+QN ITSQA KA+DLF F+VE FQITDLLVNITKH LKPKH+VLTD EK KLLKK
Sbjct: 122 KLILVLQNHITSQALKAVDLFSFQVEKFQITDLLVNITKHVLKPKHRVLTDQEKNKLLKK 181

Query: 280 YSIDEKQLPRMLQKDAIVRYYGLEKGQVLKVTYNGELTQLHVTYRCVW 137
           YS++EKQLPRMLQ+DAI RYYGLEKGQV+KV YNGE+T  HVTYRCVW
Sbjct: 182 YSLNEKQLPRMLQQDAIARYYGLEKGQVVKVIYNGEITGSHVTYRCVW 229


>ref|XP_004136650.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Cucumis sativus]
           gi|449524637|ref|XP_004169328.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC1-like
           [Cucumis sativus]
          Length = 227

 Score =  305 bits (782), Expect = 6e-81
 Identities = 148/224 (66%), Positives = 184/224 (82%), Gaps = 3/224 (1%)
 Frame = -3

Query: 799 NGVEGEEN---FGSCLSSLIDGGSIESHRYYLARKTVLEMLRDRGFAVPTCEIDVSLPEF 629
           +G E E N   FG+CLSS ID G+ ESHRY+L+R+TV+EML+DRG+ + +  ID SL +F
Sbjct: 4   DGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQF 63

Query: 628 RNKHGQMPDVEGLRITALHKDDPSIKVHVIFCGPGIVKVNAVRSIASHIVNKESLSRLIL 449
           R   GQ PDV+ L+++A H  DPS +V V+FCG G VKVNA+R+IA  I NK+SL  LIL
Sbjct: 64  RETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLHGLIL 123

Query: 448 VVQNKITSQATKALDLFKFKVEIFQITDLLVNITKHELKPKHQVLTDSEKQKLLKKYSID 269
           +VQN+IT+QA KA++LF FKVEIFQITDLLVNITKH LKP HQVLT+ EKQKLLK+YSI+
Sbjct: 124 IVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIE 183

Query: 268 EKQLPRMLQKDAIVRYYGLEKGQVLKVTYNGELTQLHVTYRCVW 137
           EKQLPRML+ DAI RYYGLEKGQV+KVTY+G++T+ H+TYRCVW
Sbjct: 184 EKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRAHITYRCVW 227


>ref|NP_001236527.1| uncharacterized protein LOC100306033 [Glycine max]
           gi|255627335|gb|ACU14012.1| unknown [Glycine max]
          Length = 237

 Score =  305 bits (780), Expect = 1e-80
 Identities = 147/234 (62%), Positives = 186/234 (79%)
 Frame = -3

Query: 838 REGGRMTKEAADGNGVEGEENFGSCLSSLIDGGSIESHRYYLARKTVLEMLRDRGFAVPT 659
           R GG   +EA    G         CLS  +D GS+ESHRYYL+R+T LEML+DRG+++P+
Sbjct: 13  RVGGEEEEEAEQAKG---------CLSKFVDNGSVESHRYYLSRRTTLEMLKDRGYSIPS 63

Query: 658 CEIDVSLPEFRNKHGQMPDVEGLRITALHKDDPSIKVHVIFCGPGIVKVNAVRSIASHIV 479
            EID+SL +FR+ HGQ PD + LR++  H  + S ++ VIFCGPG+VKV A+R+ A  I+
Sbjct: 64  HEIDLSLSDFRDIHGQFPDPDRLRLSLTHATNSSKRILVIFCGPGVVKVTAIRNTAGQII 123

Query: 478 NKESLSRLILVVQNKITSQATKALDLFKFKVEIFQITDLLVNITKHELKPKHQVLTDSEK 299
           N+++L+ LIL+V+N ITSQA KA++LF FKVEIFQITDLLVNITKH LKPKHQVLTD +K
Sbjct: 124 NRDTLTGLILIVENHITSQALKAVNLFSFKVEIFQITDLLVNITKHVLKPKHQVLTDKQK 183

Query: 298 QKLLKKYSIDEKQLPRMLQKDAIVRYYGLEKGQVLKVTYNGELTQLHVTYRCVW 137
             LLKKY+I+EKQLPRMLQ DAI RYYGLE+GQV+KVTY+GE+TQ+HVTYRCVW
Sbjct: 184 INLLKKYNIEEKQLPRMLQTDAIARYYGLERGQVVKVTYSGEVTQMHVTYRCVW 237