BLASTX nr result

ID: Scutellaria24_contig00006848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00006848
         (877 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA81859.1| unknown [Solanum tuberosum]                            207   3e-51
ref|XP_002273931.1| PREDICTED: transcription initiation factor T...   206   4e-51
ref|XP_002521322.1| protein with unknown function [Ricinus commu...   206   6e-51
ref|XP_002299587.1| predicted protein [Populus trichocarpa] gi|1...   200   3e-49
ref|NP_175816.1| transcription initiation factor TFIID subunit D...   189   6e-46

>gb|ABA81859.1| unknown [Solanum tuberosum]
          Length = 217

 Score =  207 bits (526), Expect = 3e-51
 Identities = 114/181 (62%), Positives = 128/181 (70%), Gaps = 2/181 (1%)
 Frame = -2

Query: 810 MAEGGNGDMPRDAKIVKELLKSMGVDDYEPRVVNQFLELWYRYVVDVLTDAHVYSEHAGK 631
           MAEGG  D+PRDAKIVK LLKSMGVDDYEPRVV+QFLELWYRYVVDVL DA VYSEHAGK
Sbjct: 1   MAEGGEEDLPRDAKIVKTLLKSMGVDDYEPRVVHQFLELWYRYVVDVLMDAQVYSEHAGK 60

Query: 630 SIIDSDDVKLAIQSKINFSFSQPPPREVLLELARSRNKXXXXXXXXXXXXXXXXXPDQDT 451
           + IDSDD+KLAIQSK+NFSFSQPPPREVLLELAR+RNK                 P+QDT
Sbjct: 61  ASIDSDDIKLAIQSKVNFSFSQPPPREVLLELARNRNK--IPLPKSIAGSGVPLPPEQDT 118

Query: 450 LISPNYQLAIPKCHNTQXXXXXXXXXXXXXXXXXXXDS--SQDRRDLPQGTPHRVSFPLV 277
           LI+PNYQLAI K   +Q                   +   S ++ D+PQGTP +VSFPL 
Sbjct: 119 LINPNYQLAIAKKQTSQPEETEEDEERADPNPAPSKNPSLSHEKTDVPQGTPQQVSFPLG 178

Query: 276 A 274
           A
Sbjct: 179 A 179


>ref|XP_002273931.1| PREDICTED: transcription initiation factor TFIID subunit 9B [Vitis
           vinifera] gi|297742999|emb|CBI35866.3| unnamed protein
           product [Vitis vinifera]
          Length = 177

 Score =  206 bits (525), Expect = 4e-51
 Identities = 117/183 (63%), Positives = 125/183 (68%)
 Frame = -2

Query: 810 MAEGGNGDMPRDAKIVKELLKSMGVDDYEPRVVNQFLELWYRYVVDVLTDAHVYSEHAGK 631
           MAEG   D+PRDAKIVK LLKSMGVDDYEPRV++QFLELWYRYVVDVLTDA VYSEHA K
Sbjct: 1   MAEGDE-DLPRDAKIVKSLLKSMGVDDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHASK 59

Query: 630 SIIDSDDVKLAIQSKINFSFSQPPPREVLLELARSRNKXXXXXXXXXXXXXXXXXPDQDT 451
             ID DDVKLAIQSK+NFSFSQPP REVLLELAR+RNK                 P+QDT
Sbjct: 60  PAIDCDDVKLAIQSKVNFSFSQPPAREVLLELARNRNK--IPLPKSIAGPGIPLPPEQDT 117

Query: 450 LISPNYQLAIPKCHNTQXXXXXXXXXXXXXXXXXXXDSSQDRRDLPQGTPHRVSFPLVAK 271
           LISPNYQLAIPK    Q                    S + R DLPQ TP RVSFP+ AK
Sbjct: 118 LISPNYQLAIPKKRTAQ---AVEETEEDEEGADPSHASQEGRTDLPQHTPQRVSFPIGAK 174

Query: 270 HPR 262
            PR
Sbjct: 175 RPR 177


>ref|XP_002521322.1| protein with unknown function [Ricinus communis]
           gi|223539400|gb|EEF40990.1| protein with unknown
           function [Ricinus communis]
          Length = 175

 Score =  206 bits (524), Expect = 6e-51
 Identities = 116/183 (63%), Positives = 129/183 (70%)
 Frame = -2

Query: 810 MAEGGNGDMPRDAKIVKELLKSMGVDDYEPRVVNQFLELWYRYVVDVLTDAHVYSEHAGK 631
           MAEG   ++PRDAKIVK LLKSMGV+DYEPRV++QFLELWYRYVVDVLTDA VYSEHAGK
Sbjct: 1   MAEGDE-NLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGK 59

Query: 630 SIIDSDDVKLAIQSKINFSFSQPPPREVLLELARSRNKXXXXXXXXXXXXXXXXXPDQDT 451
           S ID DDVKLAIQSK+NFSFSQPPPREVLLELAR+RNK                 P+QDT
Sbjct: 60  SAIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNK--IPLPKSIAGPGMPLPPEQDT 117

Query: 450 LISPNYQLAIPKCHNTQXXXXXXXXXXXXXXXXXXXDSSQDRRDLPQGTPHRVSFPLVAK 271
           LISPNYQLAIPK  + Q                    S + + D+PQGTP RVSFPL  K
Sbjct: 118 LISPNYQLAIPKKQSVQ----ATEETEEDEESADPNSSQEPKTDVPQGTPQRVSFPL-TK 172

Query: 270 HPR 262
            P+
Sbjct: 173 RPK 175


>ref|XP_002299587.1| predicted protein [Populus trichocarpa] gi|118484348|gb|ABK94051.1|
           unknown [Populus trichocarpa]
           gi|222846845|gb|EEE84392.1| predicted protein [Populus
           trichocarpa]
          Length = 175

 Score =  200 bits (509), Expect = 3e-49
 Identities = 116/183 (63%), Positives = 125/183 (68%)
 Frame = -2

Query: 810 MAEGGNGDMPRDAKIVKELLKSMGVDDYEPRVVNQFLELWYRYVVDVLTDAHVYSEHAGK 631
           MAEG   DMPRDAKIVK LLKSMGV+DYEPRVV+QFLELWYRYVVDVLTDA VYSEHA K
Sbjct: 1   MAEGEE-DMPRDAKIVKSLLKSMGVEDYEPRVVHQFLELWYRYVVDVLTDAQVYSEHANK 59

Query: 630 SIIDSDDVKLAIQSKINFSFSQPPPREVLLELARSRNKXXXXXXXXXXXXXXXXXPDQDT 451
           + ID DDVKLAIQSK+NFSFSQPPPREVLLELAR+RNK                 P+QDT
Sbjct: 60  TAIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNK--IPLPKSIAGPGIPLPPEQDT 117

Query: 450 LISPNYQLAIPKCHNTQXXXXXXXXXXXXXXXXXXXDSSQDRRDLPQGTPHRVSFPLVAK 271
           LISPNYQLAIPK    Q                    S + + D PQ TP RVSFPL  K
Sbjct: 118 LISPNYQLAIPKKRTAQ----AIEETEEDEESADPNQSQEQKTDPPQLTPQRVSFPL-TK 172

Query: 270 HPR 262
            P+
Sbjct: 173 RPK 175


>ref|NP_175816.1| transcription initiation factor TFIID subunit D7 [Arabidopsis
           thaliana] gi|4587557|gb|AAD25788.1|AC006577_24 Similar
           to gb|U21858 transcription initiation factor TFIID 31KD
           subunit (TAFII32) from Homo sapiens [Arabidopsis
           thaliana] gi|7638157|gb|AAF65406.1|AF238327_1 putative
           TATA binding protein associated factor 21kDa subunit
           [Arabidopsis thaliana] gi|21593471|gb|AAM65438.1|
           transcriptional activation factor TAFII32, putative
           [Arabidopsis thaliana] gi|39545926|gb|AAR28026.1| TAF9
           [Arabidopsis thaliana] gi|98960943|gb|ABF58955.1|
           At1g54140 [Arabidopsis thaliana]
           gi|332194933|gb|AEE33054.1| transcription initiation
           factor TFIID subunit D7 [Arabidopsis thaliana]
          Length = 183

 Score =  189 bits (481), Expect = 6e-46
 Identities = 107/180 (59%), Positives = 116/180 (64%), Gaps = 3/180 (1%)
 Frame = -2

Query: 810 MAEGGNGDMPRDAKIVKELLKSMGVDDYEPRVVNQFLELWYRYVVDVLTDAHVYSEHAGK 631
           MA  G  D+PRDAKIVK LLKSMGV+DYEPRV++QFLELWYRYVV+VLTDA VYSEHA K
Sbjct: 1   MAGEGEEDVPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVEVLTDAQVYSEHASK 60

Query: 630 SIIDSDDVKLAIQSKINFSFSQPPPREVLLELARSRNKXXXXXXXXXXXXXXXXXPDQDT 451
             ID DDVKLAIQSK+NFSFSQPPPREVLLELA SRNK                 P+QDT
Sbjct: 61  PNIDCDDVKLAIQSKVNFSFSQPPPREVLLELAASRNK--IPLPKSIAGPGVPLPPEQDT 118

Query: 450 LISPNYQLAIPK---CHNTQXXXXXXXXXXXXXXXXXXXDSSQDRRDLPQGTPHRVSFPL 280
           L+SPNYQL IPK       +                      Q   DLP  TP RVSFPL
Sbjct: 119 LLSPNYQLVIPKKSVSTEPEETEDDEEMTDPGQSSQEQQQQQQQTSDLPSQTPQRVSFPL 178


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