BLASTX nr result

ID: Scutellaria24_contig00006716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00006716
         (643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241022.1| uncharacterized protein LOC100793233 [Glycin...   211   9e-53
ref|XP_003630987.1| Small nuclear ribonucleoprotein-like protein...   209   3e-52
ref|XP_002878480.1| predicted protein [Arabidopsis lyrata subsp....   209   5e-52
ref|NP_001238430.1| uncharacterized protein LOC100500203 [Glycin...   208   6e-52
ref|XP_003525218.1| PREDICTED: probable small nuclear ribonucleo...   208   8e-52

>ref|NP_001241022.1| uncharacterized protein LOC100793233 [Glycine max]
           gi|255633912|gb|ACU17317.1| unknown [Glycine max]
          Length = 108

 Score =  211 bits (537), Expect = 9e-53
 Identities = 106/109 (97%), Positives = 106/109 (97%)
 Frame = +3

Query: 48  MSRPMEEDAAPGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGHVRAFDRHCNM 227
           MSRPMEEDAA GKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLG VRAFDRHCNM
Sbjct: 1   MSRPMEEDAA-GKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNM 59

Query: 228 VLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 374
           VLENVREMWTEVPKTGKGKKKA PVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 60  VLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK 108


>ref|XP_003630987.1| Small nuclear ribonucleoprotein-like protein [Medicago truncatula]
           gi|355525009|gb|AET05463.1| Small nuclear
           ribonucleoprotein-like protein [Medicago truncatula]
           gi|388506390|gb|AFK41261.1| unknown [Medicago
           truncatula]
          Length = 108

 Score =  209 bits (533), Expect = 3e-52
 Identities = 105/109 (96%), Positives = 105/109 (96%)
 Frame = +3

Query: 48  MSRPMEEDAAPGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGHVRAFDRHCNM 227
           MSRPMEEDA  GKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLG VRAFDRHCNM
Sbjct: 1   MSRPMEEDAV-GKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNM 59

Query: 228 VLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 374
           VLENVREMWTEVPKTGKGKKKA PVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 60  VLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK 108


>ref|XP_002878480.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297324318|gb|EFH54739.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 109

 Score =  209 bits (531), Expect = 5e-52
 Identities = 101/109 (92%), Positives = 104/109 (95%)
 Frame = +3

Query: 48  MSRPMEEDAAPGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGHVRAFDRHCNM 227
           MS+PMEED   GK EEEEFNTGPLSVLMMSVKNNTQVLINCRNN+KLLG VRAFDRHCNM
Sbjct: 1   MSKPMEEDTTQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNM 60

Query: 228 VLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 374
           VLENVREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK
Sbjct: 61  VLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK 109


>ref|NP_001238430.1| uncharacterized protein LOC100500203 [Glycine max]
           gi|255629692|gb|ACU15195.1| unknown [Glycine max]
          Length = 117

 Score =  208 bits (530), Expect = 6e-52
 Identities = 104/109 (95%), Positives = 105/109 (96%)
 Frame = +3

Query: 48  MSRPMEEDAAPGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGHVRAFDRHCNM 227
           MSRPMEED A GKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLG VRAFDRHCNM
Sbjct: 1   MSRPMEEDTA-GKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNM 59

Query: 228 VLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 374
           VLENVREMWTEVPKTGKGKKK+ PVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 60  VLENVREMWTEVPKTGKGKKKSQPVNKDRFISKMFLRGDSVIIVLRNPK 108


>ref|XP_003525218.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like
           [Glycine max]
          Length = 108

 Score =  208 bits (529), Expect = 8e-52
 Identities = 104/109 (95%), Positives = 104/109 (95%)
 Frame = +3

Query: 48  MSRPMEEDAAPGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGHVRAFDRHCNM 227
           MSRPMEED   GKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLG VRAFDRHCNM
Sbjct: 1   MSRPMEEDTV-GKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNM 59

Query: 228 VLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 374
           VLENVREMWTEVPKTGKGKKKA PVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 60  VLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK 108


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