BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00006668
         (1402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein...   491   e-136
ref|XP_002516292.1| tpr repeat nuclear phosphoprotein, putative ...   458   e-126
ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]...   456   e-126
ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein...   439   e-120
ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein...   438   e-120

>ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Vitis
            vinifera] gi|297738576|emb|CBI27821.3| unnamed protein
            product [Vitis vinifera]
          Length = 1091

 Score =  491 bits (1265), Expect = e-136
 Identities = 263/401 (65%), Positives = 306/401 (76%), Gaps = 16/401 (3%)
 Frame = -3

Query: 1397 FDIAKDLFTQVQEAASGSFNVQMPDVWINLAHVHFAQGNFALAVKMYENCSRKFFNNTDS 1218
            FD++KD+FTQVQEAASGS  VQMPDVWINLAHV+FAQGNFALAVKMY+NC RKF+ NTDS
Sbjct: 691  FDVSKDIFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAVKMYQNCLRKFYYNTDS 750

Query: 1217 QVLLYLARTHYEAEQWQDCKKTLLRAIHLAPSNYTLRFDAGVTLQKFSASTLSKTKRTVD 1038
            QVLLYLARTHYEAEQWQDCKKTLLRAIHLAPSNYTLRFDAGV +QKFSASTL KTKRT D
Sbjct: 751  QVLLYLARTHYEAEQWQDCKKTLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTKRTAD 810

Query: 1037 EVRATVAELKNAVRLFSLLSAASNLHFHGFDETKIATHVAYCKHLLEAANVHCELAEREE 858
            EVR+TVAELKNAVR+FS LSAASNLHFHGFDE KI THV YCKHLLEAA VHCE AEREE
Sbjct: 811  EVRSTVAELKNAVRIFSQLSAASNLHFHGFDEKKIETHVGYCKHLLEAAKVHCEAAEREE 870

Query: 857  MQNIQRLEVMRQMELADESRRKAEEQRKVQMEKRKQEDELKQVMQQEKHLERIKEQWKXX 678
            +QN  R+E+ RQ+ LA+E+RRKAEEQRK Q+E+RKQEDELK+VMQQE+H ER+KEQWK  
Sbjct: 871  LQNRHRVELARQVNLAEEARRKAEEQRKFQLERRKQEDELKRVMQQEQHFERVKEQWKSN 930

Query: 677  XXXSRRKEKPQTEDEE-XXXXXXXXXXXXXXXXXKSRYESXXXXXXXXXXXXXXXXDN-H 504
               S+RKE+ Q +D+E                  KSRY+S                ++ +
Sbjct: 931  NLNSKRKERSQIDDDEGGQSERRRRKGGKRRKKDKSRYDSEEARADAMDDQDEMEDEDTN 990

Query: 503  TSYGEQYNQ-TNEVEDKEDAPQDLLAAAGLEDSDADNDEAAPSNTNRRRRAWSESDEDEE 327
             ++ E  NQ  N+ +D ED  QDLLAAAGLEDSDA++D A PS+ NRR+RAWSESDED E
Sbjct: 991  MNHRESTNQMNNQDDDGEDDAQDLLAAAGLEDSDAEDDMAGPSSGNRRKRAWSESDED-E 1049

Query: 326  PLQRQPEAD-------HMQESDGEVN------VGGAADDEE 243
            P  ++PE+         +QESDGE+        G AA+D+E
Sbjct: 1050 PQDQRPESSPVRENSAEVQESDGEIKDDNDKPNGDAAEDDE 1090


>ref|XP_002516292.1| tpr repeat nuclear phosphoprotein, putative [Ricinus communis]
            gi|223544778|gb|EEF46294.1| tpr repeat nuclear
            phosphoprotein, putative [Ricinus communis]
          Length = 1065

 Score =  458 bits (1178), Expect = e-126
 Identities = 254/404 (62%), Positives = 296/404 (73%), Gaps = 19/404 (4%)
 Frame = -3

Query: 1397 FDIAKDLFTQVQEAASGSFNVQMPDVWINLAHVHFAQGNFALAVKMYENCSRKFFNNTDS 1218
            FD++KDLF +VQEAASGS  VQMPDVWINLAHV+FAQGNFALAVKMY+NC RKF+ +TDS
Sbjct: 664  FDVSKDLFMEVQEAASGSIFVQMPDVWINLAHVYFAQGNFALAVKMYQNCLRKFYYSTDS 723

Query: 1217 QVLLYLARTHYEAEQWQDCKKTLLRAIHLAPSNYTLRFDAGVTLQKFSASTLSKTKRTVD 1038
            Q+LLYLARTHYEAEQWQ+CKKTLLRAIHLAPSNY LRFDAGV +QKFSASTL KTKRTVD
Sbjct: 724  QILLYLARTHYEAEQWQECKKTLLRAIHLAPSNYILRFDAGVAMQKFSASTLQKTKRTVD 783

Query: 1037 EVRATVAELKNAVRLFSLLSAASNLHFHGFDETKIATHVAYCKHLLEAANVHCELAEREE 858
            EVR+TV EL+NAVRLFS LSA+SNLHFHGFDE KI THV YCKHLLEAA VH E AEREE
Sbjct: 784  EVRSTVDELENAVRLFSQLSASSNLHFHGFDEKKINTHVEYCKHLLEAAKVHREAAEREE 843

Query: 857  MQNIQRLEVMRQMELADESRRKAEEQRKVQMEKRKQEDELKQVMQQEKHLERIKEQWKXX 678
             QN QR EV RQM LA+E+RRKAEEQ+K  +EKRKQEDELK+V QQE+H ER+KEQWK  
Sbjct: 844  QQNRQRQEVARQMALAEEARRKAEEQKKFLLEKRKQEDELKRVRQQEEHFERVKEQWKTS 903

Query: 677  XXXSRRKEKPQTEDEE----XXXXXXXXXXXXXXXXXKSRYESXXXXXXXXXXXXXXXXD 510
               S+R+++ + ++EE                     KSRYE                 +
Sbjct: 904  TPGSKRRDRSEVDEEEGGHSEKRRRKGGKRRKKEKSSKSRYEIEEGEADMMDDREELEDE 963

Query: 509  N-HTSYGEQYNQ-TNEVEDKEDAPQDLLAAAGLEDSDADNDEAAPSNTNRRRRAWSESDE 336
            + + +YGE  N+  N+ ED E+  QDLLAAAGLEDSDA  ++AAPS+T RRRRA SESD+
Sbjct: 964  DANVNYGEHKNRLDNQDEDAEENAQDLLAAAGLEDSDA--EDAAPSSTARRRRALSESDD 1021

Query: 335  DE---EPLQRQP---EADHMQESDGEVNVG-------GAADDEE 243
            DE     LQ  P    +  +QESDGE+  G        A DDE+
Sbjct: 1022 DEVLDSKLQSSPVRGNSAELQESDGEIREGADKQYGDAAFDDED 1065


>ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]
            gi|222833309|gb|EEE71786.1| PAF1 complex component
            [Populus trichocarpa]
          Length = 1056

 Score =  456 bits (1172), Expect = e-126
 Identities = 239/369 (64%), Positives = 279/369 (75%), Gaps = 4/369 (1%)
 Frame = -3

Query: 1397 FDIAKDLFTQVQEAASGSFNVQMPDVWINLAHVHFAQGNFALAVKMYENCSRKFFNNTDS 1218
            FD++KDLFTQVQEAASGS  VQMPDVWINLAHV+FAQGNFALAVKMY+NC +KFF NTDS
Sbjct: 688  FDVSKDLFTQVQEAASGSIFVQMPDVWINLAHVYFAQGNFALAVKMYQNCLQKFFYNTDS 747

Query: 1217 QVLLYLARTHYEAEQWQDCKKTLLRAIHLAPSNYTLRFDAGVTLQKFSASTLSKTKRTVD 1038
            Q+LLYLARTHYEAEQWQDCK+TLLRAIHL PSNYTLRFDAGV +QKFSASTL KTKRTVD
Sbjct: 748  QILLYLARTHYEAEQWQDCKRTLLRAIHLTPSNYTLRFDAGVAMQKFSASTLQKTKRTVD 807

Query: 1037 EVRATVAELKNAVRLFSLLSAASNLHFHGFDETKIATHVAYCKHLLEAANVHCELAEREE 858
            EVR+TV EL+NAVRLFS LSAASNL+F+GFDE KI THV YCKHLLEAA VH E AEREE
Sbjct: 808  EVRSTVDELENAVRLFSQLSAASNLYFNGFDEKKINTHVEYCKHLLEAAIVHREAAEREE 867

Query: 857  MQNIQRLEVMRQMELADESRRKAEEQRKVQMEKRKQEDELKQVMQQEKHLERIKEQWKXX 678
             QN QRL++ RQM LA+E+RRKAEEQRK Q+E+RKQEDELK+V QQE+H ER+KEQWK  
Sbjct: 868  QQNRQRLDLARQMALAEEARRKAEEQRKFQLERRKQEDELKRVRQQEEHFERVKEQWKSS 927

Query: 677  XXXSRRKEKPQTEDEE----XXXXXXXXXXXXXXXXXKSRYESXXXXXXXXXXXXXXXXD 510
               S+R+++   +D E                     +SRYE                  
Sbjct: 928  TSASKRRDRADIDDGEGGHGEKRRRKGGKRRKKEKSSRSRYEMEEADMMDDHDEPEDDDA 987

Query: 509  NHTSYGEQYNQTNEVEDKEDAPQDLLAAAGLEDSDADNDEAAPSNTNRRRRAWSESDEDE 330
            N       Y   ++ ++ E+  QD+LAAAGLEDSDAD+D AAPS+  RR+RAWSESDEDE
Sbjct: 988  NVNFREPGYQMNDQDDNAEENAQDVLAAAGLEDSDADDDAAAPSSAGRRKRAWSESDEDE 1047

Query: 329  EPLQRQPEA 303
               +R+P++
Sbjct: 1048 IS-ERKPQS 1055


>ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
            max]
          Length = 1086

 Score =  439 bits (1128), Expect = e-120
 Identities = 241/396 (60%), Positives = 282/396 (71%), Gaps = 11/396 (2%)
 Frame = -3

Query: 1397 FDIAKDLFTQVQEAASGSFNVQMPDVWINLAHVHFAQGNFALAVKMYENCSRKFFNNTDS 1218
            FD++KD+FTQVQEAASGS  VQMPDVWINLAHV+FAQGNF LAVKMY+NC RKF++NTDS
Sbjct: 687  FDVSKDIFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFTLAVKMYQNCLRKFYHNTDS 746

Query: 1217 QVLLYLARTHYEAEQWQDCKKTLLRAIHLAPSNYTLRFDAGVTLQKFSASTLSKTKRTVD 1038
            Q+LLYLARTHYEAEQWQDC KTLLRAIHLAPSNYTLRFDAGV +QKFSASTL K KRT D
Sbjct: 747  QILLYLARTHYEAEQWQDCIKTLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKAKRTAD 806

Query: 1037 EVRATVAELKNAVRLFSLLSAASNLHFHGFDETKIATHVAYCKHLLEAANVHCELAEREE 858
            EVRATVAEL+NAVR+FS LSAASNLH HGFDE KI THV YC HLL AA VH E AEREE
Sbjct: 807  EVRATVAELQNAVRVFSQLSAASNLHIHGFDEKKIDTHVGYCNHLLSAAKVHLEAAEREE 866

Query: 857  MQNIQRLEVMRQMELADESRRKAEEQRKVQMEKRKQEDELKQVMQQEKHLERIKEQWKXX 678
             Q  QR E+ RQ+  A+E+RRKAEEQRK QME+RKQEDELK+V QQE+H  R+KEQWK  
Sbjct: 867  QQVRQRQELARQVAFAEEARRKAEEQRKFQMERRKQEDELKRVQQQEEHFRRVKEQWKSS 926

Query: 677  XXXSRRKEKPQTEDEE-----XXXXXXXXXXXXXXXXXKSRYESXXXXXXXXXXXXXXXX 513
                RR+   +++DEE                      KSRY++                
Sbjct: 927  SHSKRRE---RSDDEEGGGTGEKKRKKGGKRRKKDKHSKSRYDTEEPENDMMDEQEMEDE 983

Query: 512  DNHTSYGEQYNQTNEVEDKEDAPQDLLAAAGLEDSDADNDEAAPSNT-NRRRRAWSESDE 336
            +   +Y E+  QT   +D E+  Q LLAAAGLEDSDAD +  APS++  RRR+A SESD+
Sbjct: 984  EADINYREE-PQTQMNDDAEENAQGLLAAAGLEDSDADEEAPAPSSSIARRRQALSESDD 1042

Query: 335  DEEPLQRQ-----PEADHMQESDGEVNVGGAADDEE 243
            DE  +QRQ       +  MQ SDGE+  G   + ++
Sbjct: 1043 DEPLIQRQSSPARENSADMQLSDGEIRDGDKTNGDD 1078


>ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
            max]
          Length = 1088

 Score =  438 bits (1127), Expect = e-120
 Identities = 240/395 (60%), Positives = 281/395 (71%), Gaps = 10/395 (2%)
 Frame = -3

Query: 1397 FDIAKDLFTQVQEAASGSFNVQMPDVWINLAHVHFAQGNFALAVKMYENCSRKFFNNTDS 1218
            FD++KD+FTQVQEAASGS  VQMPDVWINLAHV+FAQGNF LAVKMY+NC RKF++NTDS
Sbjct: 690  FDVSKDIFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFTLAVKMYQNCLRKFYHNTDS 749

Query: 1217 QVLLYLARTHYEAEQWQDCKKTLLRAIHLAPSNYTLRFDAGVTLQKFSASTLSKTKRTVD 1038
            Q+LLYLARTHYEAEQWQDC KTLLRAIHLAPSNYTLRFDAGV +QKFSASTL K KRT D
Sbjct: 750  QILLYLARTHYEAEQWQDCIKTLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKAKRTAD 809

Query: 1037 EVRATVAELKNAVRLFSLLSAASNLHFHGFDETKIATHVAYCKHLLEAANVHCELAEREE 858
            EVRATVAEL+NAVR+FS LSAASNLH HGFDE KI THV YC HLL AA VH E AE EE
Sbjct: 810  EVRATVAELQNAVRVFSQLSAASNLHIHGFDEKKIDTHVGYCNHLLSAAKVHLEAAEHEE 869

Query: 857  MQNIQRLEVMRQMELADESRRKAEEQRKVQMEKRKQEDELKQVMQQEKHLERIKEQWKXX 678
             Q  QR E+ RQ+ LA+E+RRKAEEQRK QME+RKQEDELK+V +QE+H  R+KEQWK  
Sbjct: 870  QQVRQRQELARQVALAEEARRKAEEQRKFQMERRKQEDELKRVQKQEEHFRRVKEQWKSS 929

Query: 677  XXXSRRKEKPQTEDEEXXXXXXXXXXXXXXXXXKS----RYESXXXXXXXXXXXXXXXXD 510
                RR+   +++DEE                       RY++                +
Sbjct: 930  SHSKRRE---RSDDEEGGTGEKKRKKGGKRRKKDKHSKLRYDAEEPEDDLMDEQGMEDEE 986

Query: 509  NHTSYGEQYNQTNEVEDKEDAPQDLLAAAGLEDSDADNDEAAPSNT-NRRRRAWSESDED 333
               +Y E+  QT   +D E+  Q LLAAAGLEDSDAD + AAPS++  RRR+A SESD+D
Sbjct: 987  ADINYREE-PQTQMNDDAEENAQGLLAAAGLEDSDADEETAAPSSSIARRRQALSESDDD 1045

Query: 332  EEPLQRQ-----PEADHMQESDGEVNVGGAADDEE 243
            E  LQRQ       +  MQ SDGE+  G   + ++
Sbjct: 1046 EPLLQRQSSPVRQNSADMQLSDGEIRDGDKTNGDD 1080