BLASTX nr result

ID: Scutellaria24_contig00006666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00006666
         (908 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515885.1| 60S ribosomal protein L28, putative [Ricinus...   237   3e-60
gb|ABA46763.1| unknown [Solanum tuberosum]                            234   2e-59
ref|XP_002281233.1| PREDICTED: 60S ribosomal protein L28-2 [Viti...   234   3e-59
ref|XP_004146830.1| PREDICTED: 60S ribosomal protein L28-2-like ...   233   4e-59
ref|XP_002298257.1| predicted protein [Populus trichocarpa] gi|1...   232   8e-59

>ref|XP_002515885.1| 60S ribosomal protein L28, putative [Ricinus communis]
           gi|223544790|gb|EEF46305.1| 60S ribosomal protein L28,
           putative [Ricinus communis]
          Length = 144

 Score =  237 bits (604), Expect = 3e-60
 Identities = 119/143 (83%), Positives = 133/143 (93%)
 Frame = -2

Query: 823 MATVSGQLIWEIVKKNNSFLVKEFGNGTASVKFSKEPNNLYNLHSYKHSGLANKKTVIIQ 644
           MATV GQLIWE VKKNN FLVK+FG G+ASV+FSKEPNNLYNL+SYKHSGL+NKKTV IQ
Sbjct: 1   MATVPGQLIWEAVKKNNCFLVKQFGRGSASVQFSKEPNNLYNLNSYKHSGLSNKKTVSIQ 60

Query: 643 PGKDQSVLLATTKTKKQNKPSSLLNKSVMKKDFYRMAKAVTNQVAANHYRPDLKKAALAR 464
            GKDQSV+LATTKTKKQN+PS+LL+KSVMKK+F RMAKAV NQV  N+YRPDLKKAALAR
Sbjct: 61  AGKDQSVILATTKTKKQNRPSALLHKSVMKKEFRRMAKAVQNQVGDNYYRPDLKKAALAR 120

Query: 463 LSLVHRSLKVAKSGVKKKNRQAK 395
           LS+VHRSLKVAKSGVKK+NRQA+
Sbjct: 121 LSVVHRSLKVAKSGVKKRNRQAQ 143


>gb|ABA46763.1| unknown [Solanum tuberosum]
          Length = 143

 Score =  234 bits (598), Expect = 2e-59
 Identities = 121/143 (84%), Positives = 130/143 (90%), Gaps = 1/143 (0%)
 Frame = -2

Query: 823 MATVSGQLIWEIVKKNNSFLVKEFGNGTASVKFSKEPNNLYNLHSYKHSGLANKKTVIIQ 644
           M TV GQL+WEIVKKNNSFLVKEFGNG+A V FSKEPNNL NLHSYKHSGLANKKTV IQ
Sbjct: 1   MTTVPGQLVWEIVKKNNSFLVKEFGNGSAGVVFSKEPNNLCNLHSYKHSGLANKKTVTIQ 60

Query: 643 P-GKDQSVLLATTKTKKQNKPSSLLNKSVMKKDFYRMAKAVTNQVAANHYRPDLKKAALA 467
           P GKD+SVLLAT+KTKKQN PSSLLNKSVMKK+F RMAKAVTNQV  N+YRPDLKKAALA
Sbjct: 61  PEGKDKSVLLATSKTKKQNMPSSLLNKSVMKKEFRRMAKAVTNQVGDNYYRPDLKKAALA 120

Query: 466 RLSLVHRSLKVAKSGVKKKNRQA 398
           RLS+V+RSLKV KSG KK+NRQA
Sbjct: 121 RLSVVNRSLKVTKSGAKKRNRQA 143


>ref|XP_002281233.1| PREDICTED: 60S ribosomal protein L28-2 [Vitis vinifera]
           gi|147863559|emb|CAN84039.1| hypothetical protein
           VITISV_024169 [Vitis vinifera]
           gi|297743118|emb|CBI35985.3| unnamed protein product
           [Vitis vinifera]
          Length = 149

 Score =  234 bits (596), Expect = 3e-59
 Identities = 119/142 (83%), Positives = 130/142 (91%)
 Frame = -2

Query: 823 MATVSGQLIWEIVKKNNSFLVKEFGNGTASVKFSKEPNNLYNLHSYKHSGLANKKTVIIQ 644
           MATV GQLIWEIVKKN+SFLVKEFGNGTASV+FSKE NNLYN++SYKHSGLAN KTV IQ
Sbjct: 1   MATVPGQLIWEIVKKNSSFLVKEFGNGTASVQFSKESNNLYNVNSYKHSGLANHKTVTIQ 60

Query: 643 PGKDQSVLLATTKTKKQNKPSSLLNKSVMKKDFYRMAKAVTNQVAANHYRPDLKKAALAR 464
            GKD +V+LATTKTKKQNKP SLL+KS MKK+F RMAKAV+NQV  N+YRPDLKKAALAR
Sbjct: 61  GGKDNAVVLATTKTKKQNKPGSLLHKSAMKKEFRRMAKAVSNQVGDNYYRPDLKKAALAR 120

Query: 463 LSLVHRSLKVAKSGVKKKNRQA 398
           LS VHRSLKVAKSGVKK+NRQA
Sbjct: 121 LSAVHRSLKVAKSGVKKRNRQA 142


>ref|XP_004146830.1| PREDICTED: 60S ribosomal protein L28-2-like isoform 1 [Cucumis
           sativus] gi|449458191|ref|XP_004146831.1| PREDICTED: 60S
           ribosomal protein L28-2-like isoform 2 [Cucumis sativus]
           gi|449476678|ref|XP_004154804.1| PREDICTED: 60S
           ribosomal protein L28-2-like isoform 1 [Cucumis sativus]
           gi|449476681|ref|XP_004154805.1| PREDICTED: 60S
           ribosomal protein L28-2-like isoform 2 [Cucumis sativus]
          Length = 148

 Score =  233 bits (595), Expect = 4e-59
 Identities = 121/143 (84%), Positives = 132/143 (92%), Gaps = 1/143 (0%)
 Frame = -2

Query: 823 MATVSGQLIWEIVKKNNSFLVKEFGNGTASVKFSKEPNNLYNLHSYKHSGLANKKTVIIQ 644
           MA V GQLIWEIVK+NNSFLVKEFG GTA V+FSKE NNLYNL+SYKHSGLANKKTV IQ
Sbjct: 1   MAAVPGQLIWEIVKRNNSFLVKEFGRGTAGVQFSKEANNLYNLNSYKHSGLANKKTVTIQ 60

Query: 643 PG-KDQSVLLATTKTKKQNKPSSLLNKSVMKKDFYRMAKAVTNQVAANHYRPDLKKAALA 467
           PG KDQS+LLATTK+KKQNKPSS L+KS+MKK+F RMAKAVTNQVA N+YRPDLKKAALA
Sbjct: 61  PGGKDQSILLATTKSKKQNKPSSSLHKSLMKKEFRRMAKAVTNQVADNYYRPDLKKAALA 120

Query: 466 RLSLVHRSLKVAKSGVKKKNRQA 398
           RLS V+RSLKVAKSGVKK+NRQA
Sbjct: 121 RLSAVNRSLKVAKSGVKKRNRQA 143


>ref|XP_002298257.1| predicted protein [Populus trichocarpa] gi|118482187|gb|ABK93022.1|
           unknown [Populus trichocarpa]
           gi|222845515|gb|EEE83062.1| predicted protein [Populus
           trichocarpa]
          Length = 146

 Score =  232 bits (592), Expect = 8e-59
 Identities = 119/143 (83%), Positives = 134/143 (93%), Gaps = 1/143 (0%)
 Frame = -2

Query: 823 MATVSGQLIWEIVKKNNSFLVKEFGNGTASVKFSKEPNNLYNLHSYKHSGLANKKTVIIQ 644
           MATV GQLIWEIVKKNNSFLVK+FG GTAS++FSKE NNLYNL+SYKHSGLANKKTV IQ
Sbjct: 1   MATVPGQLIWEIVKKNNSFLVKQFGRGTASLQFSKENNNLYNLNSYKHSGLANKKTVTIQ 60

Query: 643 PG-KDQSVLLATTKTKKQNKPSSLLNKSVMKKDFYRMAKAVTNQVAANHYRPDLKKAALA 467
           P  KDQ+V+LATTKTKKQNKP++LL+KSVMKK+F RMAKAV NQVA N+YRPDLK+AALA
Sbjct: 61  PADKDQAVVLATTKTKKQNKPAALLHKSVMKKEFSRMAKAVENQVADNNYRPDLKRAALA 120

Query: 466 RLSLVHRSLKVAKSGVKKKNRQA 398
           RLS+VHRSLKV+KSGVKK+NRQA
Sbjct: 121 RLSVVHRSLKVSKSGVKKRNRQA 143


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