BLASTX nr result

ID: Scutellaria24_contig00006641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00006641
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308270.1| predicted protein [Populus trichocarpa] gi|2...   168   1e-39
ref|XP_002278441.2| PREDICTED: nuclear transcription factor Y su...   156   5e-36
emb|CBI27842.3| unnamed protein product [Vitis vinifera]              153   3e-35
ref|XP_002514074.1| Nuclear transcription factor Y subunit A-3, ...   150   3e-34
ref|XP_003546473.1| PREDICTED: nuclear transcription factor Y su...   150   3e-34

>ref|XP_002308270.1| predicted protein [Populus trichocarpa] gi|222854246|gb|EEE91793.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  168 bits (425), Expect = 1e-39
 Identities = 99/193 (51%), Positives = 119/193 (61%), Gaps = 26/193 (13%)
 Frame = -2

Query: 729 YGPHNMMQPQM----MAAASGRVPLPVDLPEDGPIYVNAKQYHGILRRRQTRAKLEAQNK 562
           YGPH  +QPQM    +   +GRVPLP+DL +DGPIYVNAKQYHGILRRRQ+RAKLEAQNK
Sbjct: 152 YGPHAFIQPQMGSHMVGMTAGRVPLPLDLADDGPIYVNAKQYHGILRRRQSRAKLEAQNK 211

Query: 561 LVKTRKPYLHESRHQHALNRVRGLGGRFLSTKK-QQSDSHPPTSSQGTNQ--DSFHLNYG 391
           LVK RKPYLHESRH HALNRVRG GGRFLSTKK Q+SD   PTSS G     D+ HL+  
Sbjct: 212 LVKNRKPYLHESRHIHALNRVRGSGGRFLSTKKLQRSD---PTSSHGQCNVLDTIHLHPK 268

Query: 390 ERQSEANKYXXXXXXXXXXXXXGD-------------------AILQSHMAVPMQGSGGL 268
              SE   +                                  + + +H+    Q +GGL
Sbjct: 269 NNASELESFQSRTGQSSASNTTRSDTTSVSNSDVNFRQPDRGFSGIAAHLVGGRQINGGL 328

Query: 267 VFNGNRHYASIVR 229
           + +GN+H+AS+VR
Sbjct: 329 MSSGNQHHASVVR 341


>ref|XP_002278441.2| PREDICTED: nuclear transcription factor Y subunit A-3-like [Vitis
           vinifera]
          Length = 350

 Score =  156 bits (394), Expect = 5e-36
 Identities = 81/129 (62%), Positives = 94/129 (72%), Gaps = 7/129 (5%)
 Frame = -2

Query: 729 YGPHNMMQPQMMAAASGRVPLPVDLPEDGPIYVNAKQYHGILRRRQTRAKLEAQNKLVKT 550
           YGPH ++QPQ++  A  RVPLP D+ EDGPI+VNAKQYHGILRRRQ+RAK+EAQNKLVK 
Sbjct: 162 YGPHAVIQPQLVGIAPTRVPLPFDIAEDGPIFVNAKQYHGILRRRQSRAKMEAQNKLVKA 221

Query: 549 RKPYLHESRHQHALNRVRGLGGRFLSTKK-QQSDS------HPPTSSQGTNQDSFHLNYG 391
           RKPYLHESRH HALNRVRG GGRFLSTKK Q+ DS      H  + S   +Q      Y 
Sbjct: 222 RKPYLHESRHLHALNRVRGSGGRFLSTKKLQEPDSTSNAGCHSVSGSGHFHQKGDTTEYE 281

Query: 390 ERQSEANKY 364
             QS+  K+
Sbjct: 282 VHQSDTGKF 290


>emb|CBI27842.3| unnamed protein product [Vitis vinifera]
          Length = 310

 Score =  153 bits (387), Expect = 3e-35
 Identities = 77/103 (74%), Positives = 87/103 (84%), Gaps = 1/103 (0%)
 Frame = -2

Query: 729 YGPHNMMQPQMMAAASGRVPLPVDLPEDGPIYVNAKQYHGILRRRQTRAKLEAQNKLVKT 550
           YGPH ++QPQ++  A  RVPLP D+ EDGPI+VNAKQYHGILRRRQ+RAK+EAQNKLVK 
Sbjct: 142 YGPHAVIQPQLVGIAPTRVPLPFDIAEDGPIFVNAKQYHGILRRRQSRAKMEAQNKLVKA 201

Query: 549 RKPYLHESRHQHALNRVRGLGGRFLSTKK-QQSDSHPPTSSQG 424
           RKPYLHESRH HALNRVRG GGRFLSTKK Q+ DS   TS+ G
Sbjct: 202 RKPYLHESRHLHALNRVRGSGGRFLSTKKLQEPDS---TSNAG 241


>ref|XP_002514074.1| Nuclear transcription factor Y subunit A-3, putative [Ricinus
           communis] gi|223546530|gb|EEF48028.1| Nuclear
           transcription factor Y subunit A-3, putative [Ricinus
           communis]
          Length = 327

 Score =  150 bits (379), Expect = 3e-34
 Identities = 75/119 (63%), Positives = 90/119 (75%), Gaps = 1/119 (0%)
 Frame = -2

Query: 729 YGPHNMMQPQMMAAASGRVPLPVDLPEDGPIYVNAKQYHGILRRRQTRAKLEAQNKLVKT 550
           YGP ++M  Q++   + RV LP+DL +DGPIYVNAKQYHGILRRRQ+RAKLEA+NKLVK 
Sbjct: 154 YGPKDIMGSQILGMTAARVALPLDLADDGPIYVNAKQYHGILRRRQSRAKLEARNKLVKA 213

Query: 549 RKPYLHESRHQHALNRVRGLGGRFLSTKK-QQSDSHPPTSSQGTNQDSFHLNYGERQSE 376
           RKPYLHESRH HALNRVRG GGRFLS  K QQ D++  +S QG +    HL+     S+
Sbjct: 214 RKPYLHESRHLHALNRVRGSGGRFLSKNKVQQLDANATSSRQGVSDSILHLHSKNETSQ 272


>ref|XP_003546473.1| PREDICTED: nuclear transcription factor Y subunit A-3-like [Glycine
           max]
          Length = 228

 Score =  150 bits (378), Expect = 3e-34
 Identities = 94/195 (48%), Positives = 112/195 (57%), Gaps = 28/195 (14%)
 Frame = -2

Query: 729 YGP----HNMMQPQMMAAASGRVPLPVDLPEDGPIYVNAKQYHGILRRRQTRAKLEAQNK 562
           YGP    H  M PQM+  AS RV LP+DL EDGPIYVNAKQYHGILRRRQ+RAKLEAQNK
Sbjct: 39  YGPQAISHPQMVPQMLGLASTRVALPLDLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNK 98

Query: 561 LVKTRKPYLHESRHQHALNRVRGLGGRFLSTKK-QQSDS-------------------HP 442
           L+K+RKPYLHESRH+HALNRVRG GGRFLSTK+  QS++                   HP
Sbjct: 99  LIKSRKPYLHESRHRHALNRVRGSGGRFLSTKQLAQSNAEFVTGAHSGSDPTNIYQKEHP 158

Query: 441 ----PTSSQGTNQDSFHLNYGERQSEANKYXXXXXXXXXXXXXGDAILQSHMAVPMQGSG 274
                 SS+  +  SF   Y +R   +                      ++M+   Q SG
Sbjct: 159 LEVESHSSKDGDNASFITTYSDRPCLSGNNLNFRQQECMFLGN-----SANMSGAPQCSG 213

Query: 273 GLVFNGNRHYASIVR 229
           GL F G +   S+VR
Sbjct: 214 GLTFGGAKQRTSVVR 228


Top