BLASTX nr result

ID: Scutellaria24_contig00006542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00006542
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299988.1| predicted protein [Populus trichocarpa] gi|2...   179   3e-43
ref|XP_002525660.1| Pre-mRNA-splicing factor ini1 [Ricinus commu...   176   1e-42
ref|XP_002313248.1| predicted protein [Populus trichocarpa] gi|2...   174   5e-42
ref|XP_002903653.1| pre-mRNA-splicing factor ini1 [Phytophthora ...   173   1e-41
ref|NP_563782.1| PHF5-like protein [Arabidopsis thaliana] gi|184...   173   2e-41

>ref|XP_002299988.1| predicted protein [Populus trichocarpa] gi|222847246|gb|EEE84793.1|
           predicted protein [Populus trichocarpa]
          Length = 110

 Score =  179 bits (453), Expect = 3e-43
 Identities = 79/79 (100%), Positives = 79/79 (100%)
 Frame = +2

Query: 50  MAKHHPDLIMCRKQPGIAIGRLCEKDDGKCVICDSYVRPCTLVRICDECNYGSFQGRCVI 229
           MAKHHPDLIMCRKQPGIAIGRLCEKDDGKCVICDSYVRPCTLVRICDECNYGSFQGRCVI
Sbjct: 1   MAKHHPDLIMCRKQPGIAIGRLCEKDDGKCVICDSYVRPCTLVRICDECNYGSFQGRCVI 60

Query: 230 CGGVGISDAYYCKECTQLE 286
           CGGVGISDAYYCKECTQLE
Sbjct: 61  CGGVGISDAYYCKECTQLE 79


>ref|XP_002525660.1| Pre-mRNA-splicing factor ini1 [Ricinus communis]
           gi|223535096|gb|EEF36778.1| Pre-mRNA-splicing factor
           ini1 [Ricinus communis]
          Length = 110

 Score =  176 bits (447), Expect = 1e-42
 Identities = 78/79 (98%), Positives = 78/79 (98%)
 Frame = +2

Query: 50  MAKHHPDLIMCRKQPGIAIGRLCEKDDGKCVICDSYVRPCTLVRICDECNYGSFQGRCVI 229
           MAKHHPDLIMCRKQPGIAIGRLCEKDDGKCVICDSYVRPCTLVRICDECNYGSFQGRCVI
Sbjct: 1   MAKHHPDLIMCRKQPGIAIGRLCEKDDGKCVICDSYVRPCTLVRICDECNYGSFQGRCVI 60

Query: 230 CGGVGISDAYYCKECTQLE 286
           CGGVGISDAYYCKECTQ E
Sbjct: 61  CGGVGISDAYYCKECTQQE 79


>ref|XP_002313248.1| predicted protein [Populus trichocarpa] gi|222849656|gb|EEE87203.1|
           predicted protein [Populus trichocarpa]
          Length = 110

 Score =  174 bits (442), Expect = 5e-42
 Identities = 77/79 (97%), Positives = 78/79 (98%)
 Frame = +2

Query: 50  MAKHHPDLIMCRKQPGIAIGRLCEKDDGKCVICDSYVRPCTLVRICDECNYGSFQGRCVI 229
           MAKHHPDLIMCRKQPGIAIGR+CEKDDGKCVICDS VRPCTLVRICDECNYGSFQGRCVI
Sbjct: 1   MAKHHPDLIMCRKQPGIAIGRVCEKDDGKCVICDSLVRPCTLVRICDECNYGSFQGRCVI 60

Query: 230 CGGVGISDAYYCKECTQLE 286
           CGGVGISDAYYCKECTQLE
Sbjct: 61  CGGVGISDAYYCKECTQLE 79


>ref|XP_002903653.1| pre-mRNA-splicing factor ini1 [Phytophthora infestans T30-4]
           gi|262097377|gb|EEY55429.1| pre-mRNA-splicing factor
           ini1 [Phytophthora infestans T30-4]
          Length = 110

 Score =  173 bits (439), Expect = 1e-41
 Identities = 74/79 (93%), Positives = 78/79 (98%)
 Frame = +2

Query: 50  MAKHHPDLIMCRKQPGIAIGRLCEKDDGKCVICDSYVRPCTLVRICDECNYGSFQGRCVI 229
           MAKHHPDL+MCRKQPG+AIGRLCEKDDGKCVICDSYVRPCTLVRICDECNYGS+QGRCVI
Sbjct: 1   MAKHHPDLVMCRKQPGVAIGRLCEKDDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVI 60

Query: 230 CGGVGISDAYYCKECTQLE 286
           CGG GISDAYYC+ECTQLE
Sbjct: 61  CGGPGISDAYYCRECTQLE 79


>ref|NP_563782.1| PHF5-like protein [Arabidopsis thaliana]
           gi|18402218|ref|NP_565691.1| PHD finger-like
           domain-containing protein 5A [Arabidopsis thaliana]
           gi|145323768|ref|NP_001077473.1| PHF5-like protein
           [Arabidopsis thaliana] gi|334182358|ref|NP_001184928.1|
           PHF5-like protein [Arabidopsis thaliana]
           gi|297826397|ref|XP_002881081.1| hypothetical protein
           ARALYDRAFT_901975 [Arabidopsis lyrata subsp. lyrata]
           gi|122223686|sp|Q0WMV8.1|PHF5B_ARATH RecName: Full=PHD
           finger-like domain-containing protein 5B
           gi|387935355|sp|P0DI19.1|PHF5A_ARATH RecName: Full=PHD
           finger-like domain-containing protein 5A
           gi|3420051|gb|AAC31852.1| expressed protein [Arabidopsis
           thaliana] gi|21593073|gb|AAM65022.1| unknown
           [Arabidopsis thaliana] gi|21618034|gb|AAM67084.1|
           unknown [Arabidopsis thaliana]
           gi|26451992|dbj|BAC43086.1| unknown protein [Arabidopsis
           thaliana] gi|28416819|gb|AAO42940.1| At2g30000
           [Arabidopsis thaliana] gi|30793845|gb|AAP40375.1|
           unknown protein [Arabidopsis thaliana]
           gi|30794025|gb|AAP40459.1| unknown protein [Arabidopsis
           thaliana] gi|110739257|dbj|BAF01542.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|297326920|gb|EFH57340.1| hypothetical protein
           ARALYDRAFT_901975 [Arabidopsis lyrata subsp. lyrata]
           gi|330253240|gb|AEC08334.1| PHD finger-like
           domain-containing protein 5A [Arabidopsis thaliana]
           gi|332189964|gb|AEE28085.1| PHF5-like protein
           [Arabidopsis thaliana] gi|332189965|gb|AEE28086.1|
           PHF5-like protein [Arabidopsis thaliana]
           gi|332189966|gb|AEE28087.1| PHF5-like protein
           [Arabidopsis thaliana]
          Length = 110

 Score =  173 bits (438), Expect = 2e-41
 Identities = 77/79 (97%), Positives = 77/79 (97%)
 Frame = +2

Query: 50  MAKHHPDLIMCRKQPGIAIGRLCEKDDGKCVICDSYVRPCTLVRICDECNYGSFQGRCVI 229
           MAKHHPDLIMCRKQPGIAIGRLCEK DGKCVICDSYVRPCTLVRICDECNYGSFQGRCVI
Sbjct: 1   MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSFQGRCVI 60

Query: 230 CGGVGISDAYYCKECTQLE 286
           CGGVGISDAYYCKECTQ E
Sbjct: 61  CGGVGISDAYYCKECTQQE 79


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