BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00006497
         (880 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002865361.1| hypothetical protein ARALYDRAFT_494537 [Arab...    57   6e-06
gb|AAM61039.1| putative snRNP protein [Arabidopsis thaliana]           57   6e-06
ref|NP_199263.1| small nuclear ribonucleoprotein B and B' [Arabi...    57   6e-06
ref|NP_193777.1| small nuclear ribonucleoprotein associated prot...    56   1e-05
ref|XP_002867880.1| hypothetical protein ARALYDRAFT_492815 [Arab...    56   1e-05

>ref|XP_002865361.1| hypothetical protein ARALYDRAFT_494537 [Arabidopsis lyrata subsp.
           lyrata] gi|297311196|gb|EFH41620.1| hypothetical protein
           ARALYDRAFT_494537 [Arabidopsis lyrata subsp. lyrata]
          Length = 256

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 30/48 (62%), Positives = 30/48 (62%)
 Frame = +2

Query: 2   PGIGRAAGRGVVTGPLSQAQXXXXXXXXXXXXXXXXMMQPQISRPPQI 145
           PGIGRAAGRGV TGPL QAQ                MMQPQISRPPQI
Sbjct: 107 PGIGRAAGRGVPTGPLVQAQPGLSGPVRGIGGPAPGMMQPQISRPPQI 154


>gb|AAM61039.1| putative snRNP protein [Arabidopsis thaliana]
          Length = 254

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 30/48 (62%), Positives = 30/48 (62%)
 Frame = +2

Query: 2   PGIGRAAGRGVVTGPLSQAQXXXXXXXXXXXXXXXXMMQPQISRPPQI 145
           PGIGRAAGRGV TGPL QAQ                MMQPQISRPPQI
Sbjct: 107 PGIGRAAGRGVPTGPLVQAQPGLSGPVRGIGGPAPGMMQPQISRPPQI 154


>ref|NP_199263.1| small nuclear ribonucleoprotein B and B' [Arabidopsis thaliana]
           gi|79329893|ref|NP_001032011.1| small nuclear
           ribonucleoprotein B and B' [Arabidopsis thaliana]
           gi|9758703|dbj|BAB09157.1| unnamed protein product
           [Arabidopsis thaliana] gi|14596137|gb|AAK68796.1|
           Unknown protein [Arabidopsis thaliana]
           gi|18377438|gb|AAL66885.1| unknown protein [Arabidopsis
           thaliana] gi|51971895|dbj|BAD44612.1| unknown protein
           [Arabidopsis thaliana] gi|62320496|dbj|BAD95039.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332007733|gb|AED95116.1| small nuclear
           ribonucleoprotein B and B' [Arabidopsis thaliana]
           gi|332007734|gb|AED95117.1| small nuclear
           ribonucleoprotein B and B' [Arabidopsis thaliana]
          Length = 254

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 30/48 (62%), Positives = 30/48 (62%)
 Frame = +2

Query: 2   PGIGRAAGRGVVTGPLSQAQXXXXXXXXXXXXXXXXMMQPQISRPPQI 145
           PGIGRAAGRGV TGPL QAQ                MMQPQISRPPQI
Sbjct: 107 PGIGRAAGRGVPTGPLVQAQPGLSGPVRGIGGPAPGMMQPQISRPPQI 154


>ref|NP_193777.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|30685110|ref|NP_849414.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|79325195|ref|NP_001031682.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|238480869|ref|NP_001154258.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|5262167|emb|CAB45810.1| putative snRNP
           protein [Arabidopsis thaliana]
           gi|7268840|emb|CAB79044.1| putative snRNP protein
           [Arabidopsis thaliana] gi|28393634|gb|AAO42236.1|
           putative snRNP protein [Arabidopsis thaliana]
           gi|28827492|gb|AAO50590.1| putative snRNP protein
           [Arabidopsis thaliana] gi|222423490|dbj|BAH19715.1|
           AT4G20440 [Arabidopsis thaliana]
           gi|332658930|gb|AEE84330.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|332658931|gb|AEE84331.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|332658932|gb|AEE84332.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|332658933|gb|AEE84333.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana]
          Length = 257

 Score = 56.2 bits (134), Expect = 1e-05
 Identities = 29/48 (60%), Positives = 30/48 (62%)
 Frame = +2

Query: 2   PGIGRAAGRGVVTGPLSQAQXXXXXXXXXXXXXXXXMMQPQISRPPQI 145
           PGIGRAAGRGV TGPL QAQ                MMQPQISRPPQ+
Sbjct: 106 PGIGRAAGRGVPTGPLVQAQPGLSGPVRGVGGPAPGMMQPQISRPPQL 153


>ref|XP_002867880.1| hypothetical protein ARALYDRAFT_492815 [Arabidopsis lyrata subsp.
           lyrata] gi|297313716|gb|EFH44139.1| hypothetical protein
           ARALYDRAFT_492815 [Arabidopsis lyrata subsp. lyrata]
          Length = 258

 Score = 56.2 bits (134), Expect = 1e-05
 Identities = 29/48 (60%), Positives = 30/48 (62%)
 Frame = +2

Query: 2   PGIGRAAGRGVVTGPLSQAQXXXXXXXXXXXXXXXXMMQPQISRPPQI 145
           PGIGRAAGRGV TGPL QAQ                MMQPQISRPPQ+
Sbjct: 106 PGIGRAAGRGVPTGPLVQAQPGLSGPVRGVGGPAPGMMQPQISRPPQL 153