BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00006491
         (1239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFI72608.1| Ycf1, partial [Callicarpa japonica]                    569   e-160
gb|AFI72609.1| Ycf1, partial [Callicarpa pedunculata]                 566   e-159
gb|AFI72624.1| Ycf1, partial [Gmelina arborea]                        558   e-156
gb|AFI72647.1| Ycf1, partial [Pseudocarpidium wrightii]               558   e-156
ref|YP_007353973.1| Ycf1 protein (chloroplast) [Tectona grandis]...   550   e-154

>gb|AFI72608.1| Ycf1, partial [Callicarpa japonica]
          Length = 1523

 Score =  569 bits (1466), Expect = e-160
 Identities = 299/414 (72%), Positives = 317/414 (76%), Gaps = 3/414 (0%)
 Frame = +2

Query: 2    SGSTNLNPKGPSLFSEGRIDSDKGTKIFNYLLNLNKIVTDPNGQXXXXXXXXXXXXXXXX 181
            SGSTNLNPKGPSLFSEGRI+ +KGTK F YLL   KIVTD NGQ                
Sbjct: 254  SGSTNLNPKGPSLFSEGRINFEKGTKYFKYLLT--KIVTDANGQKMNRKSIKIKEIRKKI 311

Query: 182  XXXXYQLITDLEQQSRDYQEDVPLEHQIRSRKGKRVVILXXXXXXXXXXXXXXXLPDQIN 361
                Y+LITDLEQQS +YQEDVP++HQIRSRKGKRVVI                + DQI+
Sbjct: 312  PRWSYKLITDLEQQSGEYQEDVPVDHQIRSRKGKRVVIFTANKENTDPNSTDTNMRDQID 371

Query: 362  EVALIRYSQQSDFRRGIIKGSMRAQRRKVVIFELFQANANSLLFVERLQESPLFSFDISR 541
            EVALIRYSQQSDFRRGIIKGSMRAQRRK+VI +LFQANA+S LF+ERLQ+SPLFSFDIS 
Sbjct: 372  EVALIRYSQQSDFRRGIIKGSMRAQRRKIVILKLFQANAHSPLFLERLQKSPLFSFDISG 431

Query: 542  LIKKILINWVGKGQ---VVECTKEQTXXXXXXXXXXXXXXXXXXXXXXWDSIPFAQVIRG 712
            LIK I  NWVGKG+   +V+ TKEQT                      WDSIPFAQVIRG
Sbjct: 432  LIKLIFRNWVGKGEAFKIVDYTKEQTKREEKKEKNKRKEKARIEIAEAWDSIPFAQVIRG 491

Query: 713  CMLLTQSIFRKYILLPSFIIAKNIGRIFLLQLPEWSEDLQEWNREIHLKCTYNGVPLSET 892
            CMLLTQSIFRKYILLPSFIIAKNIGRIFLLQLPEWSEDLQEWN+EIHLKCTYNGVPLSET
Sbjct: 492  CMLLTQSIFRKYILLPSFIIAKNIGRIFLLQLPEWSEDLQEWNKEIHLKCTYNGVPLSET 551

Query: 893  EFPKNWLTDGIQIKILFPFCMKPWHKSKLRSFQKDLMKKTKEKDDFCFLTVWGMETELPF 1072
            EFPKNWLTDGIQIKILFPFC+KPWHKSKLRS QKDLMKK KEKDDFCFLTVWGME ELPF
Sbjct: 552  EFPKNWLTDGIQIKILFPFCLKPWHKSKLRSSQKDLMKKKKEKDDFCFLTVWGMEAELPF 611

Query: 1073 CSSRKRLPFFKPILXXXXXXXXXXXXXYFRVLTVFKGKTKLLRKVSKETKKWVI 1234
             S RKR  FFKPIL             YFRVLTVFKGKTKLLRKVSKETKKWVI
Sbjct: 612  GSPRKRPSFFKPILKEFEKKIGKWKKKYFRVLTVFKGKTKLLRKVSKETKKWVI 665


>gb|AFI72609.1| Ycf1, partial [Callicarpa pedunculata]
          Length = 1523

 Score =  567 bits (1460), Expect = e-159
 Identities = 298/414 (71%), Positives = 316/414 (76%), Gaps = 3/414 (0%)
 Frame = +2

Query: 2    SGSTNLNPKGPSLFSEGRIDSDKGTKIFNYLLNLNKIVTDPNGQXXXXXXXXXXXXXXXX 181
            SGSTNLNPKGPSLFSEGRI+ +KGTK   YLL   KIVTD NGQ                
Sbjct: 254  SGSTNLNPKGPSLFSEGRINFEKGTKYLKYLLT--KIVTDANGQKMNRKSIKIKEIRKKI 311

Query: 182  XXXXYQLITDLEQQSRDYQEDVPLEHQIRSRKGKRVVILXXXXXXXXXXXXXXXLPDQIN 361
                Y+LITDLEQQS +YQEDVP++HQIRSRKGKRVVI                + DQI+
Sbjct: 312  PRWSYKLITDLEQQSGEYQEDVPVDHQIRSRKGKRVVIFTANKENTDPNSTDTNMRDQID 371

Query: 362  EVALIRYSQQSDFRRGIIKGSMRAQRRKVVIFELFQANANSLLFVERLQESPLFSFDISR 541
            EVALIRYSQQSDFRRGIIKGSMRAQRRK+VI +LFQANA+S LF+ERLQ+SPLFSFDIS 
Sbjct: 372  EVALIRYSQQSDFRRGIIKGSMRAQRRKIVILKLFQANAHSPLFLERLQKSPLFSFDISG 431

Query: 542  LIKKILINWVGKGQ---VVECTKEQTXXXXXXXXXXXXXXXXXXXXXXWDSIPFAQVIRG 712
            LIK I  NWVGKG+   +V+ TKEQT                      WDSIPFAQVIRG
Sbjct: 432  LIKLIFRNWVGKGEAFKIVDYTKEQTKREEKKEKNKRKEKARIEIAEAWDSIPFAQVIRG 491

Query: 713  CMLLTQSIFRKYILLPSFIIAKNIGRIFLLQLPEWSEDLQEWNREIHLKCTYNGVPLSET 892
            CMLLTQSIFRKYILLPSFIIAKNIGRIFLLQLPEWSEDLQEWN+EIHLKCTYNGVPLSET
Sbjct: 492  CMLLTQSIFRKYILLPSFIIAKNIGRIFLLQLPEWSEDLQEWNKEIHLKCTYNGVPLSET 551

Query: 893  EFPKNWLTDGIQIKILFPFCMKPWHKSKLRSFQKDLMKKTKEKDDFCFLTVWGMETELPF 1072
            EFPKNWLTDGIQIKILFPFC+KPWHKSKLRS QKDLMKK KEKDDFCFLTVWGME ELPF
Sbjct: 552  EFPKNWLTDGIQIKILFPFCLKPWHKSKLRSSQKDLMKKKKEKDDFCFLTVWGMEAELPF 611

Query: 1073 CSSRKRLPFFKPILXXXXXXXXXXXXXYFRVLTVFKGKTKLLRKVSKETKKWVI 1234
             S RKR  FFKPIL             YFRVLTVFKGKTKLLRKVSKETKKWVI
Sbjct: 612  GSPRKRPSFFKPILKEFEKKIGKWKKKYFRVLTVFKGKTKLLRKVSKETKKWVI 665


>gb|AFI72624.1| Ycf1, partial [Gmelina arborea]
          Length = 1526

 Score =  558 bits (1438), Expect = e-156
 Identities = 298/416 (71%), Positives = 315/416 (75%), Gaps = 5/416 (1%)
 Frame = +2

Query: 2    SGSTNLNPKGPSLFSEGRIDSDKGTK-IFNYLLNLNKIVTDPNGQXXXXXXXXXXXXXXX 178
            SGSTNLNPKGPSLFSEGRIDS+KGTK  FNYLL   KI+T+ NGQ               
Sbjct: 254  SGSTNLNPKGPSLFSEGRIDSEKGTKYFFNYLLT--KIITNVNGQKISRKSIRIKEIRKK 311

Query: 179  XXXXXYQLITDLEQQSRDYQEDVPLEHQIRSRKGKRVVILXXXXXXXXXXXXXXX-LPDQ 355
                 Y+LITDLEQQS +YQEDVP++HQIRSRKGKRVVI                 +PDQ
Sbjct: 312  IPRWSYKLITDLEQQSGEYQEDVPIDHQIRSRKGKRVVIFTANKENTDPNTTTDTNMPDQ 371

Query: 356  INEVALIRYSQQSDFRRGIIKGSMRAQRRKVVIFELFQANANSLLFVERLQESPLFSFDI 535
            I E+ALIRYSQQSDFRR IIKGSMRAQRRK+VI ELFQANA+S LF+ERLQ+ PLFSFD 
Sbjct: 372  IEEMALIRYSQQSDFRRSIIKGSMRAQRRKIVILELFQANAHSPLFLERLQKPPLFSFDT 431

Query: 536  SRLIKKILINWVGKGQV---VECTKEQTXXXXXXXXXXXXXXXXXXXXXXWDSIPFAQVI 706
            S LIK I  NWVGKG+    +E  KEQT                      WDSIPFAQVI
Sbjct: 432  SGLIKLIFRNWVGKGKANKTLEYPKEQTKREEKKEKNKRKEKARIEIAEAWDSIPFAQVI 491

Query: 707  RGCMLLTQSIFRKYILLPSFIIAKNIGRIFLLQLPEWSEDLQEWNREIHLKCTYNGVPLS 886
            RGCMLLTQSIFRKYILLPSFIIAKNIGRIFLLQLPEWSEDLQEWNREIHLKCTYNGVPLS
Sbjct: 492  RGCMLLTQSIFRKYILLPSFIIAKNIGRIFLLQLPEWSEDLQEWNREIHLKCTYNGVPLS 551

Query: 887  ETEFPKNWLTDGIQIKILFPFCMKPWHKSKLRSFQKDLMKKTKEKDDFCFLTVWGMETEL 1066
            ETEFPKNWLTDGIQIKILFPFCMKPW+KSKLRS QKDLMKK KEKDDFCFLTVWGMETEL
Sbjct: 552  ETEFPKNWLTDGIQIKILFPFCMKPWYKSKLRSSQKDLMKKKKEKDDFCFLTVWGMETEL 611

Query: 1067 PFCSSRKRLPFFKPILXXXXXXXXXXXXXYFRVLTVFKGKTKLLRKVSKETKKWVI 1234
            PF S RKR  FFKPIL             YF+VLTVFKGKTKLLRKVSKETKKWVI
Sbjct: 612  PFGSPRKRPSFFKPILKEFKKKIGKCKKKYFQVLTVFKGKTKLLRKVSKETKKWVI 667


>gb|AFI72647.1| Ycf1, partial [Pseudocarpidium wrightii]
          Length = 1544

 Score =  558 bits (1437), Expect = e-156
 Identities = 295/418 (70%), Positives = 313/418 (74%), Gaps = 7/418 (1%)
 Frame = +2

Query: 2    SGSTNLNPKGPSLFSEGRIDSDKGTKIFNYLLNLNKIVTDPNGQXXXXXXXXXXXXXXXX 181
            SGSTNLN +GPSLFSEG+ID +KGTK   YLL   KIVTD NGQ                
Sbjct: 254  SGSTNLNSRGPSLFSEGKIDFEKGTKYLKYLLT--KIVTDANGQKISRKSSRIKEISKKI 311

Query: 182  XXXXYQLITDLEQQSRDYQEDVPLEHQIRSRKGKRVVILXXXXXXXXXXXXXXXLPDQIN 361
                Y+LITDLEQQS +YQEDVP++HQIRSRKGKRVVI                +PDQI+
Sbjct: 312  PRWSYKLITDLEQQSGEYQEDVPVDHQIRSRKGKRVVIFTANKENADPNTTDTNMPDQID 371

Query: 362  EVALIRYSQQSDFRRGIIKGSMRAQRRKVVIFELFQANANSLLFVERLQESPLFSFDISR 541
            EVALIRYSQQSDFRRGIIKGSMRAQRRK+VI ELFQANA+S LF+ERLQ+SPLFSFDIS 
Sbjct: 372  EVALIRYSQQSDFRRGIIKGSMRAQRRKIVILELFQANAHSPLFLERLQKSPLFSFDISG 431

Query: 542  LIKKILINWVGKGQ---VVECTKEQTXXXXXXXXXXXXXXXXXXXXXXWDSIPFAQVIRG 712
            LIK I   WVGKG+   +VE TKEQT                      WDSIPFAQVIRG
Sbjct: 432  LIKLIFRKWVGKGEGFKIVEYTKEQTKIEEKKEKNKRKEKARIEIAEAWDSIPFAQVIRG 491

Query: 713  CMLLTQSIFRKYILLPSFIIAKNIGRIFLLQLPEWSEDLQEWNREIHLKCTYNGVPLSET 892
            CMLLTQSIFRKY+LLPSFIIAKNIGRIFLLQLPEWSEDLQEWNREIHLKCTYNGVPLSET
Sbjct: 492  CMLLTQSIFRKYLLLPSFIIAKNIGRIFLLQLPEWSEDLQEWNREIHLKCTYNGVPLSET 551

Query: 893  EFPKNWLTDGIQIKILFPFCMKPWHKSKLRS----FQKDLMKKTKEKDDFCFLTVWGMET 1060
            EFPKNWLTDGIQIKILFPFC+KPWHKSKLRS     QKDLMKK KEKDDFCFLTVWGME 
Sbjct: 552  EFPKNWLTDGIQIKILFPFCLKPWHKSKLRSSQKDLQKDLMKKKKEKDDFCFLTVWGMEA 611

Query: 1061 ELPFCSSRKRLPFFKPILXXXXXXXXXXXXXYFRVLTVFKGKTKLLRKVSKETKKWVI 1234
            E PF   RKR  FFKPIL             YFRVLTVFKGKTKLLRK+SKETKKWVI
Sbjct: 612  EFPFGPPRKRPSFFKPILKEFKKKVGKCKKKYFRVLTVFKGKTKLLRKLSKETKKWVI 669


>ref|YP_007353973.1| Ycf1 protein (chloroplast) [Tectona grandis]
            gi|438687662|emb|CCP47191.1| YCF1 protein (chloroplast)
            [Tectona grandis] gi|438688346|emb|CCP47280.1| YCF1
            protein (chloroplast) [Tectona grandis]
            gi|438688470|emb|CCP47369.1| YCF1 protein (chloroplast)
            [Tectona grandis]
          Length = 1898

 Score =  550 bits (1418), Expect = e-154
 Identities = 294/415 (70%), Positives = 312/415 (75%), Gaps = 4/415 (0%)
 Frame = +2

Query: 2    SGSTNLNPKGPSLFS-EGRIDSDKGTKIFNYLLNLNKIVTDPNGQXXXXXXXXXXXXXXX 178
            SG+TNLNPKG SLFS E RIDS KGT  FNYLL   KI+TD NGQ               
Sbjct: 625  SGATNLNPKGFSLFSSEERIDSKKGTIHFNYLLT--KILTDANGQKISRKSIRIKEISKK 682

Query: 179  XXXXXYQLITDLEQQSRDYQEDVPLEHQIRSRKGKRVVILXXXXXXXXXXXXXXXLPDQI 358
                 Y+LITDLEQQS +YQE+VP++HQIRSRKGKRVVI                +PDQI
Sbjct: 683  IPRWSYKLITDLEQQSGEYQENVPVDHQIRSRKGKRVVIFTANKENTDPNTTDTNMPDQI 742

Query: 359  NEVALIRYSQQSDFRRGIIKGSMRAQRRKVVIFELFQANANSLLFVERLQESPLFSFDIS 538
            +EVALIRYSQQSDFRRGIIKGSMRAQRRK+VI ELFQAN +S LF+ERLQ+SP FSFDIS
Sbjct: 743  DEVALIRYSQQSDFRRGIIKGSMRAQRRKIVILELFQANVHSPLFLERLQKSPFFSFDIS 802

Query: 539  RLIKKILINWVGKGQ---VVECTKEQTXXXXXXXXXXXXXXXXXXXXXXWDSIPFAQVIR 709
             LIK I  NW G  +   +VE TKEQT                      WDSIPFAQVIR
Sbjct: 803  GLIKLIFRNWGGGREAFKIVEYTKEQTKREEKKEKNKRKEKARIEIAEAWDSIPFAQVIR 862

Query: 710  GCMLLTQSIFRKYILLPSFIIAKNIGRIFLLQLPEWSEDLQEWNREIHLKCTYNGVPLSE 889
            GCMLLTQSIFRKYILLPSFIIAKNIGRIFLLQLPEWSEDLQEWN+EIHLKCTYNGVPLSE
Sbjct: 863  GCMLLTQSIFRKYILLPSFIIAKNIGRIFLLQLPEWSEDLQEWNKEIHLKCTYNGVPLSE 922

Query: 890  TEFPKNWLTDGIQIKILFPFCMKPWHKSKLRSFQKDLMKKTKEKDDFCFLTVWGMETELP 1069
            TEFPKNWLTDGIQIKILFPFC+KPWHKSKLRS QKDLMKK KEKDDFCFLTVWGMETELP
Sbjct: 923  TEFPKNWLTDGIQIKILFPFCLKPWHKSKLRSSQKDLMKKEKEKDDFCFLTVWGMETELP 982

Query: 1070 FCSSRKRLPFFKPILXXXXXXXXXXXXXYFRVLTVFKGKTKLLRKVSKETKKWVI 1234
            F S RKR  FFKPIL             YFRVLTVFKGKTKLLRKVSKETKKW+I
Sbjct: 983  FGSPRKRPSFFKPILKEFEKKIGKWKKNYFRVLTVFKGKTKLLRKVSKETKKWII 1037