BLASTX nr result

ID: Scutellaria24_contig00006348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00006348
         (1521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277185.1| PREDICTED: ribosome biogenesis GTPase A [Vit...   147   7e-33
ref|XP_002318658.1| predicted protein [Populus trichocarpa] gi|2...   127   6e-27
ref|XP_004143028.1| PREDICTED: ribosome biogenesis GTPase A-like...   126   1e-26
ref|XP_002526350.1| GTP binding protein, putative [Ricinus commu...   126   2e-26
ref|XP_003532888.1| PREDICTED: ribosome biogenesis GTPase A-like...   117   8e-24

>ref|XP_002277185.1| PREDICTED: ribosome biogenesis GTPase A [Vitis vinifera]
            gi|297744953|emb|CBI38545.3| unnamed protein product
            [Vitis vinifera]
          Length = 369

 Score =  147 bits (371), Expect = 7e-33
 Identities = 72/110 (65%), Positives = 93/110 (84%)
 Frame = +1

Query: 1192 IQNIGKAVKAVVKGRSSEWWYTPHMAAASRAIADRIPLVDLVLEVRDARIPLSSECLQLR 1371
            I N+ K + + VK R+++ W++PHMAAASRA+++RIPLVDLVLEVRDARIPLSSE  QLR
Sbjct: 3    IANLEKRLGSGVK-RAAKTWFSPHMAAASRAVSERIPLVDLVLEVRDARIPLSSEYDQLR 61

Query: 1372 KLPSSSNRIILLNKMDLANHDQTKEWMKFFKEQKCMAFGVNAHNNENIKE 1521
              PSSS RII+LNKMDLAN  + KEWM++F++Q C++FGVN+HN +NIKE
Sbjct: 62   NFPSSSKRIIVLNKMDLANRLEIKEWMRYFEQQNCISFGVNSHNKDNIKE 111


>ref|XP_002318658.1| predicted protein [Populus trichocarpa] gi|222859331|gb|EEE96878.1|
            predicted protein [Populus trichocarpa]
          Length = 338

 Score =  127 bits (320), Expect = 6e-27
 Identities = 64/118 (54%), Positives = 83/118 (70%), Gaps = 1/118 (0%)
 Frame = +1

Query: 1171 MAVTEVLIQNIGKAVKAVVKGRSSEWWYTPHMAAASRAIADRIPLVDLVLEVRDARIPLS 1350
            MA   + ++ IG+A+K    G     WY+ HMAAAS AIA RIPL D +LEVRDARIPLS
Sbjct: 3    MASRSIGLKEIGEALKKAKSG-----WYSLHMAAASHAIAQRIPLADFILEVRDARIPLS 57

Query: 1351 SECLQLRKLPSSS-NRIILLNKMDLANHDQTKEWMKFFKEQKCMAFGVNAHNNENIKE 1521
            S C  L   P SS  RII++NK DLAN  Q KEW K+F++Q C+++GVN+HN E++K+
Sbjct: 58   SHCQLLSNFPPSSLRRIIVMNKTDLANRSQLKEWTKYFEQQNCISYGVNSHNKEDVKK 115


>ref|XP_004143028.1| PREDICTED: ribosome biogenesis GTPase A-like [Cucumis sativus]
            gi|449482814|ref|XP_004156412.1| PREDICTED: ribosome
            biogenesis GTPase A-like [Cucumis sativus]
          Length = 366

 Score =  126 bits (317), Expect = 1e-26
 Identities = 62/112 (55%), Positives = 81/112 (72%), Gaps = 1/112 (0%)
 Frame = +1

Query: 1189 LIQNIGKAVKAVVKG-RSSEWWYTPHMAAASRAIADRIPLVDLVLEVRDARIPLSSECLQ 1365
            L++ IG A+  +  G R S  WY  HM AASRA+A+RIPLVD VLEVRDARIP SSE   
Sbjct: 6    LMRKIGTAINQLAAGNRISSGWYDAHMEAASRAVAERIPLVDFVLEVRDARIPTSSEYEM 65

Query: 1366 LRKLPSSSNRIILLNKMDLANHDQTKEWMKFFKEQKCMAFGVNAHNNENIKE 1521
            ++  P SS RII+LNK DLA+  QT+ W + F++  C+++GVN+HN ENI+E
Sbjct: 66   MKNHPPSSKRIIVLNKTDLADQSQTEVWTRHFEDHNCISYGVNSHNKENIRE 117


>ref|XP_002526350.1| GTP binding protein, putative [Ricinus communis]
            gi|223534309|gb|EEF36021.1| GTP binding protein, putative
            [Ricinus communis]
          Length = 373

 Score =  126 bits (316), Expect = 2e-26
 Identities = 62/112 (55%), Positives = 80/112 (71%)
 Frame = +1

Query: 1186 VLIQNIGKAVKAVVKGRSSEWWYTPHMAAASRAIADRIPLVDLVLEVRDARIPLSSECLQ 1365
            +L   IGK V    + R   W Y PHMAAAS AIA+RI LVD V+EVRDARIPLSSEC  
Sbjct: 1    MLASEIGKRVMKASRNREQRW-YNPHMAAASSAIAERISLVDFVIEVRDARIPLSSECQL 59

Query: 1366 LRKLPSSSNRIILLNKMDLANHDQTKEWMKFFKEQKCMAFGVNAHNNENIKE 1521
            L     SS RII++NKMDLAN  Q K+W+K+FK++  +++ +N+HN +N+KE
Sbjct: 60   LTNHSDSSRRIIVMNKMDLANRLQLKDWIKYFKQRGFVSYAINSHNKDNVKE 111


>ref|XP_003532888.1| PREDICTED: ribosome biogenesis GTPase A-like [Glycine max]
          Length = 399

 Score =  117 bits (293), Expect = 8e-24
 Identities = 61/117 (52%), Positives = 78/117 (66%)
 Frame = +1

Query: 1171 MAVTEVLIQNIGKAVKAVVKGRSSEWWYTPHMAAASRAIADRIPLVDLVLEVRDARIPLS 1350
            M+    L + +G   K  ++ R+   W  P  AAASRAIA+RIPL DLV++VRDARIPLS
Sbjct: 23   MSAAARLGRRVGTTAKEELR-RNKGAWRDPLPAAASRAIAERIPLADLVVQVRDARIPLS 81

Query: 1351 SECLQLRKLPSSSNRIILLNKMDLANHDQTKEWMKFFKEQKCMAFGVNAHNNENIKE 1521
            SEC  LR  P S  +I+ LNKMDL      K WM +F+E+ C++ GVNAHN ENIK+
Sbjct: 82   SECEILRNYPPSLKQIVALNKMDLVGTSNVKAWMGYFRERNCISCGVNAHNKENIKQ 138


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