BLASTX nr result

ID: Scutellaria24_contig00006241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00006241
         (961 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA81859.1| unknown [Solanum tuberosum]                            233   7e-59
ref|XP_002273931.1| PREDICTED: transcription initiation factor T...   224   3e-56
ref|XP_002299587.1| predicted protein [Populus trichocarpa] gi|1...   223   7e-56
ref|XP_002521322.1| protein with unknown function [Ricinus commu...   221   2e-55
ref|NP_175816.1| transcription initiation factor TFIID subunit D...   212   9e-53

>gb|ABA81859.1| unknown [Solanum tuberosum]
          Length = 217

 Score =  233 bits (593), Expect = 7e-59
 Identities = 119/180 (66%), Positives = 137/180 (76%), Gaps = 4/180 (2%)
 Frame = -2

Query: 789 MADGGEEDMPRDGKIVKDLLRSMNVDNYEPRVIHQFLELWYRYVADVLTDAQSYSEHAEK 610
           MA+GGEED+PRD KIVK LL+SM VD+YEPRV+HQFLELWYRYV DVL DAQ YSEHA K
Sbjct: 1   MAEGGEEDLPRDAKIVKTLLKSMGVDDYEPRVVHQFLELWYRYVVDVLMDAQVYSEHAGK 60

Query: 609 SIIDSDDVKLAIQSKVNFSFSQPPPRXXXXXLARSRNKVPLPKSALGLGIPLPPEEDTLI 430
           + IDSDD+KLAIQSKVNFSFSQPPPR     LAR+RNK+PLPKS  G G+PLPPE+DTLI
Sbjct: 61  ASIDSDDIKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPKSIAGSGVPLPPEQDTLI 120

Query: 429 NPNFQLDVPKRQSSQLXXXXXXXXXXXXANP----NQNTSQNQGDSSQGTPQRVSFPLGA 262
           NPN+QL + K+Q+SQ              NP    N + S  + D  QGTPQ+VSFPLGA
Sbjct: 121 NPNYQLAIAKKQTSQ-PEETEEDEERADPNPAPSKNPSLSHEKTDVPQGTPQQVSFPLGA 179


>ref|XP_002273931.1| PREDICTED: transcription initiation factor TFIID subunit 9B [Vitis
           vinifera] gi|297742999|emb|CBI35866.3| unnamed protein
           product [Vitis vinifera]
          Length = 177

 Score =  224 bits (570), Expect = 3e-56
 Identities = 114/176 (64%), Positives = 134/176 (76%)
 Frame = -2

Query: 777 GEEDMPRDGKIVKDLLRSMNVDNYEPRVIHQFLELWYRYVADVLTDAQSYSEHAEKSIID 598
           G+ED+PRD KIVK LL+SM VD+YEPRVIHQFLELWYRYV DVLTDAQ YSEHA K  ID
Sbjct: 4   GDEDLPRDAKIVKSLLKSMGVDDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHASKPAID 63

Query: 597 SDDVKLAIQSKVNFSFSQPPPRXXXXXLARSRNKVPLPKSALGLGIPLPPEEDTLINPNF 418
            DDVKLAIQSKVNFSFSQPP R     LAR+RNK+PLPKS  G GIPLPPE+DTLI+PN+
Sbjct: 64  CDDVKLAIQSKVNFSFSQPPAREVLLELARNRNKIPLPKSIAGPGIPLPPEQDTLISPNY 123

Query: 417 QLDVPKRQSSQLXXXXXXXXXXXXANPNQNTSQNQGDSSQGTPQRVSFPLGAKDSR 250
           QL +PK++++Q             A+P+  + + + D  Q TPQRVSFP+GAK  R
Sbjct: 124 QLAIPKKRTAQ--AVEETEEDEEGADPSHASQEGRTDLPQHTPQRVSFPIGAKRPR 177


>ref|XP_002299587.1| predicted protein [Populus trichocarpa] gi|118484348|gb|ABK94051.1|
           unknown [Populus trichocarpa]
           gi|222846845|gb|EEE84392.1| predicted protein [Populus
           trichocarpa]
          Length = 175

 Score =  223 bits (567), Expect = 7e-56
 Identities = 115/170 (67%), Positives = 133/170 (78%)
 Frame = -2

Query: 777 GEEDMPRDGKIVKDLLRSMNVDNYEPRVIHQFLELWYRYVADVLTDAQSYSEHAEKSIID 598
           GEEDMPRD KIVK LL+SM V++YEPRV+HQFLELWYRYV DVLTDAQ YSEHA K+ ID
Sbjct: 4   GEEDMPRDAKIVKSLLKSMGVEDYEPRVVHQFLELWYRYVVDVLTDAQVYSEHANKTAID 63

Query: 597 SDDVKLAIQSKVNFSFSQPPPRXXXXXLARSRNKVPLPKSALGLGIPLPPEEDTLINPNF 418
            DDVKLAIQSKVNFSFSQPPPR     LAR+RNK+PLPKS  G GIPLPPE+DTLI+PN+
Sbjct: 64  CDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPKSIAGPGIPLPPEQDTLISPNY 123

Query: 417 QLDVPKRQSSQLXXXXXXXXXXXXANPNQNTSQNQGDSSQGTPQRVSFPL 268
           QL +PK++++Q             A+PNQ+  Q + D  Q TPQRVSFPL
Sbjct: 124 QLAIPKKRTAQ--AIEETEEDEESADPNQSQEQ-KTDPPQLTPQRVSFPL 170


>ref|XP_002521322.1| protein with unknown function [Ricinus communis]
           gi|223539400|gb|EEF40990.1| protein with unknown
           function [Ricinus communis]
          Length = 175

 Score =  221 bits (564), Expect = 2e-55
 Identities = 113/170 (66%), Positives = 130/170 (76%)
 Frame = -2

Query: 777 GEEDMPRDGKIVKDLLRSMNVDNYEPRVIHQFLELWYRYVADVLTDAQSYSEHAEKSIID 598
           G+E++PRD KIVK LL+SM V++YEPRVIHQFLELWYRYV DVLTDAQ YSEHA KS ID
Sbjct: 4   GDENLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKSAID 63

Query: 597 SDDVKLAIQSKVNFSFSQPPPRXXXXXLARSRNKVPLPKSALGLGIPLPPEEDTLINPNF 418
            DDVKLAIQSKVNFSFSQPPPR     LAR+RNK+PLPKS  G G+PLPPE+DTLI+PN+
Sbjct: 64  CDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPKSIAGPGMPLPPEQDTLISPNY 123

Query: 417 QLDVPKRQSSQLXXXXXXXXXXXXANPNQNTSQNQGDSSQGTPQRVSFPL 268
           QL +PK+QS Q              N +Q   + + D  QGTPQRVSFPL
Sbjct: 124 QLAIPKKQSVQATEETEEDEESADPNSSQ---EPKTDVPQGTPQRVSFPL 170


>ref|NP_175816.1| transcription initiation factor TFIID subunit D7 [Arabidopsis
           thaliana] gi|4587557|gb|AAD25788.1|AC006577_24 Similar
           to gb|U21858 transcription initiation factor TFIID 31KD
           subunit (TAFII32) from Homo sapiens [Arabidopsis
           thaliana] gi|7638157|gb|AAF65406.1|AF238327_1 putative
           TATA binding protein associated factor 21kDa subunit
           [Arabidopsis thaliana] gi|21593471|gb|AAM65438.1|
           transcriptional activation factor TAFII32, putative
           [Arabidopsis thaliana] gi|39545926|gb|AAR28026.1| TAF9
           [Arabidopsis thaliana] gi|98960943|gb|ABF58955.1|
           At1g54140 [Arabidopsis thaliana]
           gi|332194933|gb|AEE33054.1| transcription initiation
           factor TFIID subunit D7 [Arabidopsis thaliana]
          Length = 183

 Score =  212 bits (540), Expect = 9e-53
 Identities = 110/181 (60%), Positives = 126/181 (69%), Gaps = 4/181 (2%)
 Frame = -2

Query: 789 MADGGEEDMPRDGKIVKDLLRSMNVDNYEPRVIHQFLELWYRYVADVLTDAQSYSEHAEK 610
           MA  GEED+PRD KIVK LL+SM V++YEPRVIHQFLELWYRYV +VLTDAQ YSEHA K
Sbjct: 1   MAGEGEEDVPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVEVLTDAQVYSEHASK 60

Query: 609 SIIDSDDVKLAIQSKVNFSFSQPPPRXXXXXLARSRNKVPLPKSALGLGIPLPPEEDTLI 430
             ID DDVKLAIQSKVNFSFSQPPPR     LA SRNK+PLPKS  G G+PLPPE+DTL+
Sbjct: 61  PNIDCDDVKLAIQSKVNFSFSQPPPREVLLELAASRNKIPLPKSIAGPGVPLPPEQDTLL 120

Query: 429 NPNFQLDVPKRQSS----QLXXXXXXXXXXXXANPNQNTSQNQGDSSQGTPQRVSFPLGA 262
           +PN+QL +PK+  S    +             +   Q   Q   D    TPQRVSFPL  
Sbjct: 121 SPNYQLVIPKKSVSTEPEETEDDEEMTDPGQSSQEQQQQQQQTSDLPSQTPQRVSFPLSR 180

Query: 261 K 259
           +
Sbjct: 181 R 181


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