BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00006081
         (867 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002885498.1| ATRPABC24.3 [Arabidopsis lyrata subsp. lyrat...   315   8e-84
ref|NP_188871.1| DNA-directed RNA polymerase II subunit E [Arabi...   312   6e-83
ref|XP_002331171.1| predicted protein [Populus trichocarpa] gi|2...   311   1e-82
ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycin...   310   2e-82
ref|NP_001237497.1| uncharacterized protein LOC100306098 [Glycin...   309   5e-82

>ref|XP_002885498.1| ATRPABC24.3 [Arabidopsis lyrata subsp. lyrata]
           gi|297331338|gb|EFH61757.1| ATRPABC24.3 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 205

 Score =  315 bits (807), Expect = 8e-84
 Identities = 156/205 (76%), Positives = 181/205 (88%), Gaps = 1/205 (0%)
 Frame = -2

Query: 791 VMSEEEIGRLYRIRKTVLQMLKDRGYLVHDSEIEMSKMLFIQKYGENMKREDLFIIKESR 612
           +++EEEI RLYRI+KT++QMLKDRGY + DSE+ M+K  FI+K+G+NMKREDL  +K  R
Sbjct: 1   MLTEEEIKRLYRIQKTLMQMLKDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKVKR 60

Query: 611 NEN-DQIYVFFPDEAKVGVKTIKTYTNRMKEENVHRAILVVQQNLTPFAKTCISEISSKF 435
           N+N DQ+Y+FFPDEAKVGVKT+K YTNRMK ENV+RAILVVQQNLTPFA+TCISEISSKF
Sbjct: 61  NDNSDQLYIFFPDEAKVGVKTMKMYTNRMKSENVYRAILVVQQNLTPFARTCISEISSKF 120

Query: 434 HLDVFQEAELLVNIKDHVLVPEHQXXXXXXXXXXXERYTVRETQLPRIQITDPIARYYGL 255
           HL+VFQEAE+LVNIK+HVLVPEHQ           ERYTV+ETQLPRIQ+TDPIARY+GL
Sbjct: 121 HLEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGL 180

Query: 254 KRGQVVKIIRPSETAGRYVTYRYVV 180
           KRGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 181 KRGQVVKIIRPSETAGRYVTYRYVV 205


>ref|NP_188871.1| DNA-directed RNA polymerase II subunit E [Arabidopsis thaliana]
           gi|13899113|gb|AAK48978.1|AF370551_1 RNA polymerase I,
           II and III 24.3 kDa subunit [Arabidopsis thaliana]
           gi|15724322|gb|AAL06554.1|AF412101_1 AT3g22320/MCB17_5
           [Arabidopsis thaliana] gi|3372233|gb|AAC28253.1| RNA
           polymerase I, II and III 24.3 kDa subunit [Arabidopsis
           thaliana] gi|9293866|dbj|BAB01769.1| RNA polymerase I,
           II and III 24.3 kDa subunit [Arabidopsis thaliana]
           gi|21554280|gb|AAM63355.1| RNA polymerase I, II and III
           24.3 kDa subunit [Arabidopsis thaliana]
           gi|25083949|gb|AAN72141.1| RNA polymerase I, II and III
           24.3 kDa subunit [Arabidopsis thaliana]
           gi|332643100|gb|AEE76621.1| DNA-directed RNA polymerase
           II subunit E [Arabidopsis thaliana]
          Length = 205

 Score =  312 bits (800), Expect = 6e-83
 Identities = 154/205 (75%), Positives = 180/205 (87%), Gaps = 1/205 (0%)
 Frame = -2

Query: 791 VMSEEEIGRLYRIRKTVLQMLKDRGYLVHDSEIEMSKMLFIQKYGENMKREDLFIIKESR 612
           +++EEE+ RLYRI+KT++QML+DRGY + DSE+ M+K  FI+K+G+NMKREDL  +K  R
Sbjct: 1   MLTEEELKRLYRIQKTLMQMLRDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKAKR 60

Query: 611 NEN-DQIYVFFPDEAKVGVKTIKTYTNRMKEENVHRAILVVQQNLTPFAKTCISEISSKF 435
           N+N DQ+Y+FFPDEAKVGVKT+K YTNRMK ENV RAILVVQQNLTPFA+TCISEISSKF
Sbjct: 61  NDNSDQLYIFFPDEAKVGVKTMKMYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKF 120

Query: 434 HLDVFQEAELLVNIKDHVLVPEHQXXXXXXXXXXXERYTVRETQLPRIQITDPIARYYGL 255
           HL+VFQEAE+LVNIK+HVLVPEHQ           ERYTV+ETQLPRIQ+TDPIARY+GL
Sbjct: 121 HLEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGL 180

Query: 254 KRGQVVKIIRPSETAGRYVTYRYVV 180
           KRGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 181 KRGQVVKIIRPSETAGRYVTYRYVV 205


>ref|XP_002331171.1| predicted protein [Populus trichocarpa] gi|222873254|gb|EEF10385.1|
           predicted protein [Populus trichocarpa]
          Length = 206

 Score =  311 bits (797), Expect = 1e-82
 Identities = 160/206 (77%), Positives = 177/206 (85%), Gaps = 1/206 (0%)
 Frame = -2

Query: 794 MVMSEEEIGRLYRIRKTVLQMLKDRGYLVHDSEIEMSKMLFIQKYGENMKREDLFIIKES 615
           M ++EEEI RL RIRKTV+QMLKDRGY V D EI+M++  F  KYG NMKREDL I K  
Sbjct: 1   MTLTEEEIKRLLRIRKTVMQMLKDRGYFVGDFEIKMTREQFESKYGNNMKREDLVINKTK 60

Query: 614 RNEN-DQIYVFFPDEAKVGVKTIKTYTNRMKEENVHRAILVVQQNLTPFAKTCISEISSK 438
           RN++ DQIYVFFP+EAKVGVKT+KTYTNRMK ENV RAILVVQQNLTPFA+TCI+EIS+K
Sbjct: 61  RNDSSDQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTK 120

Query: 437 FHLDVFQEAELLVNIKDHVLVPEHQXXXXXXXXXXXERYTVRETQLPRIQITDPIARYYG 258
           FHL+VFQEAELLVNIK+HVLVPEHQ           ERYTV+ETQLPRIQITDPIARYYG
Sbjct: 121 FHLEVFQEAELLVNIKEHVLVPEHQVLSNEEKKTLLERYTVKETQLPRIQITDPIARYYG 180

Query: 257 LKRGQVVKIIRPSETAGRYVTYRYVV 180
           LKRGQVVKIIRPSETAGRYVTYRYV+
Sbjct: 181 LKRGQVVKIIRPSETAGRYVTYRYVI 206


>ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycine max]
           gi|255625665|gb|ACU13177.1| unknown [Glycine max]
          Length = 206

 Score =  310 bits (795), Expect = 2e-82
 Identities = 159/206 (77%), Positives = 175/206 (84%), Gaps = 1/206 (0%)
 Frame = -2

Query: 794 MVMSEEEIGRLYRIRKTVLQMLKDRGYLVHDSEIEMSKMLFIQKYGENMKREDLFIIKES 615
           MV+SEEE+GRLYRIRKTV+QML+DRG+LV D EI MSK  F  KYGE+MKREDL I K  
Sbjct: 1   MVLSEEEMGRLYRIRKTVMQMLRDRGFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSK 60

Query: 614 R-NENDQIYVFFPDEAKVGVKTIKTYTNRMKEENVHRAILVVQQNLTPFAKTCISEISSK 438
           + N  DQIYVFFPDE KVGVKT+KTYTNRM  ENV+RAILV Q NLTPFA+TCISEISSK
Sbjct: 61  KDNSGDQIYVFFPDEPKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISSK 120

Query: 437 FHLDVFQEAELLVNIKDHVLVPEHQXXXXXXXXXXXERYTVRETQLPRIQITDPIARYYG 258
           FHL+VFQEAELLVNIK+H LVPEHQ           ERYTV+ETQLPRIQ+TDP+ARYYG
Sbjct: 121 FHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLLERYTVKETQLPRIQVTDPVARYYG 180

Query: 257 LKRGQVVKIIRPSETAGRYVTYRYVV 180
           LKRGQVVKIIRPSETAGRYVTYR+VV
Sbjct: 181 LKRGQVVKIIRPSETAGRYVTYRFVV 206


>ref|NP_001237497.1| uncharacterized protein LOC100306098 [Glycine max]
           gi|255627545|gb|ACU14117.1| unknown [Glycine max]
          Length = 206

 Score =  309 bits (792), Expect = 5e-82
 Identities = 159/206 (77%), Positives = 174/206 (84%), Gaps = 1/206 (0%)
 Frame = -2

Query: 794 MVMSEEEIGRLYRIRKTVLQMLKDRGYLVHDSEIEMSKMLFIQKYGENMKREDLFIIKES 615
           MV+SEEEIGRLYRIRKTV+QML+DR +LV D EI MSK  F  KYGE+MKREDL I K  
Sbjct: 1   MVLSEEEIGRLYRIRKTVMQMLRDRNFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSK 60

Query: 614 R-NENDQIYVFFPDEAKVGVKTIKTYTNRMKEENVHRAILVVQQNLTPFAKTCISEISSK 438
           + N  DQIYVFFPDE KVGVKT+KTYTNRM  ENV+RAILV Q NLTPFA+TCISEISSK
Sbjct: 61  KDNSGDQIYVFFPDEPKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISSK 120

Query: 437 FHLDVFQEAELLVNIKDHVLVPEHQXXXXXXXXXXXERYTVRETQLPRIQITDPIARYYG 258
           FHL+VFQEAELLVNIK+H LVPEHQ           ERYTV+ETQLPRIQ+TDP+ARYYG
Sbjct: 121 FHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLLERYTVKETQLPRIQVTDPVARYYG 180

Query: 257 LKRGQVVKIIRPSETAGRYVTYRYVV 180
           LKRGQVVKIIRPSETAGRYVTYR+VV
Sbjct: 181 LKRGQVVKIIRPSETAGRYVTYRFVV 206