BLASTX nr result

ID: Scutellaria24_contig00005998 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00005998
         (1305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271564.2| PREDICTED: ribosome biogenesis GTPase A-like...   527   e-147
gb|ABK94828.1| unknown [Populus trichocarpa]                          513   e-143
ref|XP_002307583.1| predicted protein [Populus trichocarpa] gi|2...   512   e-143
ref|NP_001242175.1| uncharacterized protein LOC100784201 [Glycin...   503   e-140
ref|XP_004150129.1| PREDICTED: ribosome biogenesis GTPase A-like...   499   e-139

>ref|XP_002271564.2| PREDICTED: ribosome biogenesis GTPase A-like [Vitis vinifera]
            gi|296086696|emb|CBI32331.3| unnamed protein product
            [Vitis vinifera]
          Length = 367

 Score =  527 bits (1358), Expect = e-147
 Identities = 270/370 (72%), Positives = 305/370 (82%), Gaps = 2/370 (0%)
 Frame = +1

Query: 13   MAAQLSGLWLHSPAITLTGEVPHRHGRRPSAALSAAQPSTSSPIIQIVGGKSLGW--NGM 186
            MA  L G+W+ +P  TL+G V     +  + AL+A     SS  IQIVGGKS G   NG 
Sbjct: 1    MAVALCGVWMPNP--TLSGNVLPSQIKPSTTALAATPHLASSSTIQIVGGKSHGQYVNGG 58

Query: 187  ESSKLSSTMDDEPEEFDWVAFEADLFHWTKVLRPVQWYPGHIAKTXXXXXXXXXXMDVVI 366
             SS  + T +D  EE  W   +ADL+HWTK LRP+QWYPGHIAKT          MDVVI
Sbjct: 59   VSS--NRTFEDISEESYWTNLDADLYHWTKKLRPIQWYPGHIAKTEKELKEQLKLMDVVI 116

Query: 367  EVRDARIPLSTSHPQMDSWLANRKRIIVLNREDMISTADRDAWASYYARQGTKVVFSNGQ 546
            EV+DARIPLSTSHPQM+SWL NRKRI+VLNREDMIST DR+AWA+YYA QG KVVFSNGQ
Sbjct: 117  EVQDARIPLSTSHPQMESWLGNRKRILVLNREDMISTEDRNAWATYYAMQGIKVVFSNGQ 176

Query: 547  FGMGTMKLTRLAKDLASGVNIKRKSKGLLPRPIRAGIVGYPNVGKSSLINRLLKRRMCPA 726
             GMG+MKL+RLAK LASGVN+KR++KGLLPRP+RAGIVGYPNVGKSSLINRLLKRRMCPA
Sbjct: 177  LGMGSMKLSRLAKTLASGVNVKRRAKGLLPRPVRAGIVGYPNVGKSSLINRLLKRRMCPA 236

Query: 727  APRPGVTRELKWVHFGKDLELLDSPGVIPMRINDQSAAIKLAICDDIGERSYDVSEVAAI 906
            APRPGVTR+LKWV FGKDLELLDSPG+IPMRI+DQSAAIKLAICDDIGERSYDV++VAAI
Sbjct: 237  APRPGVTRQLKWVQFGKDLELLDSPGIIPMRISDQSAAIKLAICDDIGERSYDVADVAAI 296

Query: 907  LVQILTRLPSVGYKALHQRYKIETDCRDGRIFVQKLARQLFNGDTHHAAFRILSDFRKGK 1086
            LVQ+LTR+P+VG KAL+ RYKI+TD   G IFVQKLA QLFNGDTH AAFRIL+DFRKGK
Sbjct: 297  LVQMLTRIPAVGPKALYNRYKIDTDGLCGNIFVQKLALQLFNGDTHQAAFRILTDFRKGK 356

Query: 1087 FGWVALERPP 1116
            FGW+ALERPP
Sbjct: 357  FGWIALERPP 366


>gb|ABK94828.1| unknown [Populus trichocarpa]
          Length = 367

 Score =  513 bits (1320), Expect = e-143
 Identities = 263/372 (70%), Positives = 293/372 (78%), Gaps = 3/372 (0%)
 Frame = +1

Query: 13   MAAQLSGLWLHSPAITLTGEVPHRHGRRPSAALSAAQPSTSSP--IIQIVGGKSL-GWNG 183
            M  ++ GLWL +PAI      P  H   P+ A      S SSP   IQIVGGKS   W G
Sbjct: 1    MGVEVLGLWLPNPAIRFN-RPPFLHLSPPTRASLVTPASLSSPPPTIQIVGGKSTPSWQG 59

Query: 184  MESSKLSSTMDDEPEEFDWVAFEADLFHWTKVLRPVQWYPGHIAKTXXXXXXXXXXMDVV 363
              +           EE DW  FE DL+HWTK LRPVQWYPGHIAKT          MDVV
Sbjct: 60   SGNDVCGGG----GEETDWYDFETDLYHWTKPLRPVQWYPGHIAKTEKELKEQLKLMDVV 115

Query: 364  IEVRDARIPLSTSHPQMDSWLANRKRIIVLNREDMISTADRDAWASYYARQGTKVVFSNG 543
            IEVRDARIPLST+HPQMD+WL NRKRI+VLNREDMIS ADR+AWA+Y+ARQG KVV SNG
Sbjct: 116  IEVRDARIPLSTTHPQMDAWLGNRKRILVLNREDMISKADRNAWATYFARQGIKVVLSNG 175

Query: 544  QFGMGTMKLTRLAKDLASGVNIKRKSKGLLPRPIRAGIVGYPNVGKSSLINRLLKRRMCP 723
            Q GMGTMKL+R AK LA+ VN+KR+ KGLLPRP+RAGIVGYPNVGKSSLINRLLKRRMCP
Sbjct: 176  QLGMGTMKLSRFAKSLAASVNVKRREKGLLPRPVRAGIVGYPNVGKSSLINRLLKRRMCP 235

Query: 724  AAPRPGVTRELKWVHFGKDLELLDSPGVIPMRINDQSAAIKLAICDDIGERSYDVSEVAA 903
            AAPRPGVTREL+WV FG DLELLDSPG+IPMRI+DQSAAIKLAICDDIGERSYDV++VAA
Sbjct: 236  AAPRPGVTRELRWVRFGNDLELLDSPGIIPMRISDQSAAIKLAICDDIGERSYDVTDVAA 295

Query: 904  ILVQILTRLPSVGYKALHQRYKIETDCRDGRIFVQKLARQLFNGDTHHAAFRILSDFRKG 1083
            ILVQILT+LP+VG KAL+ RYK++ D   G+IFVQKL+  LFNGDTH AAFRILSDFRKG
Sbjct: 296  ILVQILTKLPTVGAKALNNRYKMDADDFCGKIFVQKLSVHLFNGDTHQAAFRILSDFRKG 355

Query: 1084 KFGWVALERPPK 1119
            KFGW ALERPP+
Sbjct: 356  KFGWAALERPPR 367


>ref|XP_002307583.1| predicted protein [Populus trichocarpa] gi|222857032|gb|EEE94579.1|
            predicted protein [Populus trichocarpa]
          Length = 387

 Score =  512 bits (1318), Expect = e-143
 Identities = 263/371 (70%), Positives = 292/371 (78%), Gaps = 3/371 (0%)
 Frame = +1

Query: 13   MAAQLSGLWLHSPAITLTGEVPHRHGRRPSAALSAAQPSTSSP--IIQIVGGKSL-GWNG 183
            M  ++ GLWL +PAI      P  H   P+ A      S SSP   IQIVGGKS   W G
Sbjct: 1    MGVEVLGLWLPNPAIRFN-RPPFLHLSPPTRASLVTPASLSSPPPTIQIVGGKSTPSWQG 59

Query: 184  MESSKLSSTMDDEPEEFDWVAFEADLFHWTKVLRPVQWYPGHIAKTXXXXXXXXXXMDVV 363
              +           EE DW  FE DL+HWTK LRPVQWYPGHIAKT          MDVV
Sbjct: 60   SGNDVCGGG----GEETDWYDFETDLYHWTKPLRPVQWYPGHIAKTEKELKEQLKLMDVV 115

Query: 364  IEVRDARIPLSTSHPQMDSWLANRKRIIVLNREDMISTADRDAWASYYARQGTKVVFSNG 543
            IEVRDARIPLST+HPQMD+WL NRKRI+VLNREDMIS ADR+AWA+Y+ARQG KVV SNG
Sbjct: 116  IEVRDARIPLSTTHPQMDAWLGNRKRILVLNREDMISKADRNAWATYFARQGIKVVLSNG 175

Query: 544  QFGMGTMKLTRLAKDLASGVNIKRKSKGLLPRPIRAGIVGYPNVGKSSLINRLLKRRMCP 723
            Q GMGTMKL+R AK LA+ VN+KR+ KGLLPRP+RAGIVGYPNVGKSSLINRLLKRRMCP
Sbjct: 176  QLGMGTMKLSRFAKSLAASVNVKRREKGLLPRPVRAGIVGYPNVGKSSLINRLLKRRMCP 235

Query: 724  AAPRPGVTRELKWVHFGKDLELLDSPGVIPMRINDQSAAIKLAICDDIGERSYDVSEVAA 903
            AAPRPGVTREL+WV FG DLELLDSPG+IPMRI+DQSAAIKLAICDDIGERSYDV++VAA
Sbjct: 236  AAPRPGVTRELRWVRFGNDLELLDSPGIIPMRISDQSAAIKLAICDDIGERSYDVTDVAA 295

Query: 904  ILVQILTRLPSVGYKALHQRYKIETDCRDGRIFVQKLARQLFNGDTHHAAFRILSDFRKG 1083
            ILVQILT+LP+VG KAL+ RYK++ D   G+IFVQKL+  LFNGDTH AAFRILSDFRKG
Sbjct: 296  ILVQILTKLPTVGAKALNNRYKMDADDFCGKIFVQKLSVHLFNGDTHQAAFRILSDFRKG 355

Query: 1084 KFGWVALERPP 1116
            KFGW ALERPP
Sbjct: 356  KFGWAALERPP 366


>ref|NP_001242175.1| uncharacterized protein LOC100784201 [Glycine max]
            gi|255634965|gb|ACU17841.1| unknown [Glycine max]
          Length = 391

 Score =  503 bits (1296), Expect = e-140
 Identities = 255/372 (68%), Positives = 296/372 (79%), Gaps = 3/372 (0%)
 Frame = +1

Query: 13   MAAQLSGLWLHSPAITLTGEVPHRHGRRPSAALSAAQPSTSSPIIQIVGGKSLGW--NGM 186
            M+ QLS LW+ +        VP+R GR  ++ALS+      SP IQI+G     W  NG 
Sbjct: 1    MSVQLSSLWVPNSPPIPQHFVPNR-GRFSASALSS-----QSPTIQIIGVGGPSWRENGY 54

Query: 187  ESSKLSSTMDDEPEEFD-WVAFEADLFHWTKVLRPVQWYPGHIAKTXXXXXXXXXXMDVV 363
             +   ++  D    E D W   + DL+HWTK LRPVQW+PGHIAK           MDVV
Sbjct: 55   GNPNNNNLFDGCQGESDHWSELDTDLYHWTKALRPVQWFPGHIAKAEKELKEQLKLMDVV 114

Query: 364  IEVRDARIPLSTSHPQMDSWLANRKRIIVLNREDMISTADRDAWASYYARQGTKVVFSNG 543
            IEVRD RIP+STSHPQMD WL NRKRI+VLNREDMISTADR+AWA Y+ R GTKVVFSNG
Sbjct: 115  IEVRDGRIPMSTSHPQMDPWLGNRKRILVLNREDMISTADRNAWADYFTRNGTKVVFSNG 174

Query: 544  QFGMGTMKLTRLAKDLASGVNIKRKSKGLLPRPIRAGIVGYPNVGKSSLINRLLKRRMCP 723
            Q GMGTMKL RLAK+LA+ VN+KR+SKGLLPR +RAGIVGYPNVGKSSLINRLLKRRMCP
Sbjct: 175  QLGMGTMKLGRLAKELAADVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCP 234

Query: 724  AAPRPGVTRELKWVHFGKDLELLDSPGVIPMRINDQSAAIKLAICDDIGERSYDVSEVAA 903
            AAPRPGVTREL+WV FGKDLELLDSPG++PMRI+DQSAAIKLAICDDIGERSYDV++VAA
Sbjct: 235  AAPRPGVTRELRWVRFGKDLELLDSPGILPMRISDQSAAIKLAICDDIGERSYDVADVAA 294

Query: 904  ILVQILTRLPSVGYKALHQRYKIETDCRDGRIFVQKLARQLFNGDTHHAAFRILSDFRKG 1083
            ILVQ+L++LP+VG  AL +RYKI+ DCRDGRIF++KLA ++FNGD H AAFR+L+DFRKG
Sbjct: 295  ILVQMLSKLPTVGRDALCKRYKIDVDCRDGRIFIEKLAVRVFNGDVHQAAFRVLADFRKG 354

Query: 1084 KFGWVALERPPK 1119
            KFGW ALERPPK
Sbjct: 355  KFGWTALERPPK 366


>ref|XP_004150129.1| PREDICTED: ribosome biogenesis GTPase A-like [Cucumis sativus]
            gi|449507918|ref|XP_004163166.1| PREDICTED: ribosome
            biogenesis GTPase A-like [Cucumis sativus]
          Length = 370

 Score =  499 bits (1285), Expect = e-139
 Identities = 249/346 (71%), Positives = 287/346 (82%)
 Frame = +1

Query: 82   RHGRRPSAALSAAQPSTSSPIIQIVGGKSLGWNGMESSKLSSTMDDEPEEFDWVAFEADL 261
            R G  P +   +A  S+  P IQIVGGK+  + G  + K +S  ++E  E DWV FEADL
Sbjct: 26   RSGPSPPSLAPSASVSSPHPTIQIVGGKTSNFLGDSTPKGAS--NNELLEGDWVDFEADL 83

Query: 262  FHWTKVLRPVQWYPGHIAKTXXXXXXXXXXMDVVIEVRDARIPLSTSHPQMDSWLANRKR 441
            ++WT  LRPVQWYPGHIAKT          MDVVIEVRDARIP+STSHPQMD+WL NR+R
Sbjct: 84   YYWTNALRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPMSTSHPQMDAWLGNRRR 143

Query: 442  IIVLNREDMISTADRDAWASYYARQGTKVVFSNGQFGMGTMKLTRLAKDLASGVNIKRKS 621
            I+VLNREDMIS+ADR+AWA+Y+ RQG KVVFSNGQ GMGTMKL RLAK LA+ VN+KR++
Sbjct: 144  ILVLNREDMISSADRNAWATYFTRQGIKVVFSNGQHGMGTMKLGRLAKTLAADVNVKRRA 203

Query: 622  KGLLPRPIRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELKWVHFGKDLELLDSP 801
            KGLLPR +RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELKWV FG DLELLDSP
Sbjct: 204  KGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELKWVRFGNDLELLDSP 263

Query: 802  GVIPMRINDQSAAIKLAICDDIGERSYDVSEVAAILVQILTRLPSVGYKALHQRYKIETD 981
            G+IPMRI+DQ+AAIKLAICDDIGERSY+ ++VAAILVQILT+LPSVG + L +RYK++  
Sbjct: 264  GIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILVQILTKLPSVGIETLQKRYKVDAG 323

Query: 982  CRDGRIFVQKLARQLFNGDTHHAAFRILSDFRKGKFGWVALERPPK 1119
             + G+IFVQKLA QLFNGD H AAFRILSDFRKGKFGW ALERPP+
Sbjct: 324  GQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERPPR 369


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