BLASTX nr result

ID: Scutellaria24_contig00005950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00005950
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADN34237.1| pre-mRNA splicing factor [Cucumis melo subsp. melo]    150   1e-34
ref|XP_004140515.1| PREDICTED: pre-mRNA-processing factor 6-like...   146   1e-33
ref|XP_003543338.1| PREDICTED: pre-mRNA-processing factor 6-like...   146   2e-33
ref|XP_003540356.1| PREDICTED: pre-mRNA-processing factor 6-like...   146   2e-33
gb|AEY85031.1| putative pre-mRNA splicing factor [Camellia sinen...   145   3e-33

>gb|ADN34237.1| pre-mRNA splicing factor [Cucumis melo subsp. melo]
          Length = 727

 Score =  150 bits (379), Expect = 1e-34
 Identities = 68/81 (83%), Positives = 76/81 (93%)
 Frame = -1

Query: 284 TLSPDIGDFWALYYKFELQHGSEESQKDVLNRCVAADPKHGEKWQTISKAVENSHQPTEF 105
           TL+PD+GDFWALYYKFELQHG++E+QKDVL RC+AA+PKHGEKWQTISKAVENSHQPTE 
Sbjct: 647 TLAPDVGDFWALYYKFELQHGADENQKDVLKRCIAAEPKHGEKWQTISKAVENSHQPTES 706

Query: 104 ILKKVVVAIGKEDHAAENGKN 42
           ILKKVVVA+GKED A EN KN
Sbjct: 707 ILKKVVVALGKEDGAVENSKN 727


>ref|XP_004140515.1| PREDICTED: pre-mRNA-processing factor 6-like [Cucumis sativus]
            gi|449514699|ref|XP_004164455.1| PREDICTED:
            pre-mRNA-processing factor 6-like [Cucumis sativus]
          Length = 1023

 Score =  146 bits (369), Expect = 1e-33
 Identities = 66/81 (81%), Positives = 75/81 (92%)
 Frame = -1

Query: 284  TLSPDIGDFWALYYKFELQHGSEESQKDVLNRCVAADPKHGEKWQTISKAVENSHQPTEF 105
            TL+PD+GDFWALYYKFELQHG +E+QKDVL RC+AA+PKHGEKWQTISKAVENSHQPTE 
Sbjct: 943  TLAPDVGDFWALYYKFELQHGGDENQKDVLKRCIAAEPKHGEKWQTISKAVENSHQPTES 1002

Query: 104  ILKKVVVAIGKEDHAAENGKN 42
            ILKKVVVA+GKE+ A E+ KN
Sbjct: 1003 ILKKVVVALGKEEGAVESSKN 1023


>ref|XP_003543338.1| PREDICTED: pre-mRNA-processing factor 6-like [Glycine max]
          Length = 1034

 Score =  146 bits (368), Expect = 2e-33
 Identities = 67/81 (82%), Positives = 76/81 (93%)
 Frame = -1

Query: 284  TLSPDIGDFWALYYKFELQHGSEESQKDVLNRCVAADPKHGEKWQTISKAVENSHQPTEF 105
            TL+PDIGDFWAL YKFELQHG+EE+QKDVL RC+AA+PKHGEKWQ ISKAVENSHQPTE 
Sbjct: 954  TLAPDIGDFWALLYKFELQHGTEENQKDVLKRCIAAEPKHGEKWQAISKAVENSHQPTES 1013

Query: 104  ILKKVVVAIGKEDHAAENGKN 42
            ILKKVVVA+GKE++AAEN K+
Sbjct: 1014 ILKKVVVALGKEENAAENNKH 1034


>ref|XP_003540356.1| PREDICTED: pre-mRNA-processing factor 6-like [Glycine max]
          Length = 1041

 Score =  146 bits (368), Expect = 2e-33
 Identities = 67/81 (82%), Positives = 76/81 (93%)
 Frame = -1

Query: 284  TLSPDIGDFWALYYKFELQHGSEESQKDVLNRCVAADPKHGEKWQTISKAVENSHQPTEF 105
            TL+PDIGDFWAL YKFELQHG+EE+QKDVL RC+AA+PKHGEKWQ ISKAVENSHQPTE 
Sbjct: 961  TLAPDIGDFWALLYKFELQHGTEENQKDVLKRCIAAEPKHGEKWQAISKAVENSHQPTES 1020

Query: 104  ILKKVVVAIGKEDHAAENGKN 42
            ILKKVVVA+GKE++AAEN K+
Sbjct: 1021 ILKKVVVALGKEENAAENNKH 1041


>gb|AEY85031.1| putative pre-mRNA splicing factor [Camellia sinensis]
          Length = 1023

 Score =  145 bits (367), Expect = 3e-33
 Identities = 65/81 (80%), Positives = 76/81 (93%)
 Frame = -1

Query: 284  TLSPDIGDFWALYYKFELQHGSEESQKDVLNRCVAADPKHGEKWQTISKAVENSHQPTEF 105
            TL+PDIGD+WALYYKFELQHG+EE+QKDVL RC+AA+PKHGEKWQ ISKAVENSHQPTE 
Sbjct: 943  TLAPDIGDYWALYYKFELQHGTEENQKDVLKRCIAAEPKHGEKWQAISKAVENSHQPTEA 1002

Query: 104  ILKKVVVAIGKEDHAAENGKN 42
            ILKKVV+A+GKE+ +AEN K+
Sbjct: 1003 ILKKVVIALGKEESSAENSKH 1023


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