BLASTX nr result

ID: Scutellaria24_contig00005940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00005940
         (1402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273641.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   461   e-127
gb|ABK92556.1| unknown [Populus trichocarpa]                          446   e-123
ref|XP_002530611.1| dead box ATP-dependent RNA helicase, putativ...   436   e-120
ref|XP_003635393.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   432   e-119
emb|CBI33259.3| unnamed protein product [Vitis vinifera]              431   e-118

>ref|XP_002273641.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 16, partial [Vitis
            vinifera]
          Length = 545

 Score =  461 bits (1185), Expect = e-127
 Identities = 240/316 (75%), Positives = 268/316 (84%), Gaps = 1/316 (0%)
 Frame = -2

Query: 1359 IFANSIDMSFRLKLFLEQFGIKSAVLNAELPVNSRLHILEEFNAGLFDYLIASDVSQSSE 1180
            IF NSIDM+FRLKLFLE+FGIKSAVLNAELP NSRLHILEEFNAGLFDYLIA+D SQ  E
Sbjct: 227  IFTNSIDMAFRLKLFLEKFGIKSAVLNAELPQNSRLHILEEFNAGLFDYLIATDGSQPKE 286

Query: 1179 -EQNDKEIHAPRXXXXXXXXXKLDAEFGVVRGIDFKNVYTVINYEMPQTAAGYVHRVGRT 1003
             EQ D+               KLD+EFGVVRGIDFKNV+TVIN+EMPQ A GYVHR+GRT
Sbjct: 287  KEQADEGSQIEPRKSRKHSKQKLDSEFGVVRGIDFKNVHTVINFEMPQNAPGYVHRIGRT 346

Query: 1002 GRAYNTGASVSLVSPEEMEIFEEIKSLLGEKESEDSKFIAPFPLLSKNAVESLRYRAEDV 823
            GRAYNTGASVSLVSP+EMEI EEIKS+LG+ E+++S FIAPFPLL+KNAVESLRYRAEDV
Sbjct: 347  GRAYNTGASVSLVSPDEMEILEEIKSILGDDENKESNFIAPFPLLTKNAVESLRYRAEDV 406

Query: 822  SRSVTKIAVRESRAQDLRNEILNSEKLKAHFQDNPRDLDLLKHDKVLSKKQPAAHLRDVP 643
            S+SVTK+AVRESRAQDLRNEI+NSEKLKAHF+ N RDLDLLKHDKVLSKK    HLRDVP
Sbjct: 407  SKSVTKLAVRESRAQDLRNEIVNSEKLKAHFEVNQRDLDLLKHDKVLSKKPIPTHLRDVP 466

Query: 642  EYLLDPTTKEASKIVKLARAAMGNTGSNRRKVFKGKFKRSRDPLKTFSAEAPKRGQKAGM 463
            +YLLDPTT+EASKIVKLARAAMGNT   RR+  + KF++SRDPLKTFSAEAPK+  K GM
Sbjct: 467  DYLLDPTTQEASKIVKLARAAMGNTNPARRQGSRRKFRKSRDPLKTFSAEAPKKASKGGM 526

Query: 462  KRKGKTKDEGH*HQNK 415
            KRK K  D+ H H+ K
Sbjct: 527  KRKEKDNDDSHKHKKK 542


>gb|ABK92556.1| unknown [Populus trichocarpa]
          Length = 619

 Score =  446 bits (1148), Expect = e-123
 Identities = 230/319 (72%), Positives = 268/319 (84%), Gaps = 1/319 (0%)
 Frame = -2

Query: 1359 IFANSIDMSFRLKLFLEQFGIKSAVLNAELPVNSRLHILEEFNAGLFDYLIASDVSQSSE 1180
            IF N+IDMSFRLKLFLE+FGIKSAVLNAELP NSRLHILEEFNAGLFDYLIA+D  ++ E
Sbjct: 301  IFTNAIDMSFRLKLFLEKFGIKSAVLNAELPQNSRLHILEEFNAGLFDYLIATDDRETKE 360

Query: 1179 EQNDKEIH-APRXXXXXXXXXKLDAEFGVVRGIDFKNVYTVINYEMPQTAAGYVHRVGRT 1003
            ++   E   A           KLD+EFGVVRGIDFKNV+TVINY+MP +A GYVHR+GRT
Sbjct: 361  KEKANEGSLAETRKSKKHAKQKLDSEFGVVRGIDFKNVHTVINYDMPLSATGYVHRIGRT 420

Query: 1002 GRAYNTGASVSLVSPEEMEIFEEIKSLLGEKESEDSKFIAPFPLLSKNAVESLRYRAEDV 823
            GRAY+TG+SVSLVSP+EMEI EEIKS LG+ E+ +S  I+P+PLL+KNAVESLRYRAED 
Sbjct: 421  GRAYSTGSSVSLVSPDEMEILEEIKSFLGDDENNESNVISPYPLLTKNAVESLRYRAEDT 480

Query: 822  SRSVTKIAVRESRAQDLRNEILNSEKLKAHFQDNPRDLDLLKHDKVLSKKQPAAHLRDVP 643
            ++SVTKIAVRE+RAQDLRNEILNSEKLKAHF+ NPRDLDLLKHDKVLSKK PA HL DVP
Sbjct: 481  AKSVTKIAVREARAQDLRNEILNSEKLKAHFEVNPRDLDLLKHDKVLSKKPPAPHLSDVP 540

Query: 642  EYLLDPTTKEASKIVKLARAAMGNTGSNRRKVFKGKFKRSRDPLKTFSAEAPKRGQKAGM 463
            +YLLD TTKEASK+VKLARAAMGN  S RR+  K  F++S+DPLK+FSAE P+RG+K GM
Sbjct: 541  DYLLDATTKEASKMVKLARAAMGNNNSGRRQGPKRNFRKSKDPLKSFSAEGPRRGRKGGM 600

Query: 462  KRKGKTKDEGH*HQNKVDL 406
            KR+GK  D+ H H+ K +L
Sbjct: 601  KREGKDGDDTHKHKKKKNL 619


>ref|XP_002530611.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223529859|gb|EEF31791.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 616

 Score =  436 bits (1120), Expect = e-120
 Identities = 222/314 (70%), Positives = 261/314 (83%), Gaps = 1/314 (0%)
 Frame = -2

Query: 1359 IFANSIDMSFRLKLFLEQFGIKSAVLNAELPVNSRLHILEEFNAGLFDYLIASDVSQSSE 1180
            IF NSIDMSFRL+LFLE+FGIKSA+LNAELP NSRLHILEEFNAGLFDYLIA+D S++ E
Sbjct: 298  IFTNSIDMSFRLRLFLEKFGIKSAILNAELPQNSRLHILEEFNAGLFDYLIATDDSETKE 357

Query: 1179 -EQNDKEIHAPRXXXXXXXXXKLDAEFGVVRGIDFKNVYTVINYEMPQTAAGYVHRVGRT 1003
             EQ   + +  +         KLD+EFGVVRGIDFKNV+TV+NY+MP  AAGYVHR+GRT
Sbjct: 358  KEQEQADRNLAQSRKSKKSKQKLDSEFGVVRGIDFKNVHTVVNYDMPLNAAGYVHRIGRT 417

Query: 1002 GRAYNTGASVSLVSPEEMEIFEEIKSLLGEKESEDSKFIAPFPLLSKNAVESLRYRAEDV 823
            GR YN+G+SVSLVSP+EMEI E++KS LG+ E++DS  IAPFPLL+KNAVESLRYRAEDV
Sbjct: 418  GRGYNSGSSVSLVSPDEMEILEDVKSFLGDDENKDSNIIAPFPLLTKNAVESLRYRAEDV 477

Query: 822  SRSVTKIAVRESRAQDLRNEILNSEKLKAHFQDNPRDLDLLKHDKVLSKKQPAAHLRDVP 643
            ++SVTKIAV+E+RAQDLRNEILNSEKLKAHF+ NPRDLDLLKHDKVLSK  PA HLRDVP
Sbjct: 478  AKSVTKIAVKEARAQDLRNEILNSEKLKAHFEANPRDLDLLKHDKVLSKNPPAPHLRDVP 537

Query: 642  EYLLDPTTKEASKIVKLARAAMGNTGSNRRKVFKGKFKRSRDPLKTFSAEAPKRGQKAGM 463
            +YL+D TTKEASK+VKLARAAMG    +RR+  K KF +S+DPLK  S +APK+  K GM
Sbjct: 538  DYLMDATTKEASKMVKLARAAMGKNNPSRRQGSKKKFIKSKDPLKALSFQAPKKSDKGGM 597

Query: 462  KRKGKTKDEGH*HQ 421
            KR+ K  D  H H+
Sbjct: 598  KRERKDGDSTHKHK 611


>ref|XP_003635393.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 16-like, partial
            [Vitis vinifera]
          Length = 305

 Score =  432 bits (1112), Expect = e-119
 Identities = 226/302 (74%), Positives = 254/302 (84%), Gaps = 1/302 (0%)
 Frame = -2

Query: 1317 FLEQFGIKSAVLNAELPVNSRLHILEEFNAGLFDYLIASDVSQSSE-EQNDKEIHAPRXX 1141
            +L QFGIKSAVLNAELP NSRLHILEEFNAGLFDYLIA+D SQ  E EQ D+        
Sbjct: 1    YLWQFGIKSAVLNAELPQNSRLHILEEFNAGLFDYLIATDGSQPKEKEQADEGSQIEPRK 60

Query: 1140 XXXXXXXKLDAEFGVVRGIDFKNVYTVINYEMPQTAAGYVHRVGRTGRAYNTGASVSLVS 961
                   KLD+EFGVVRGIDFKNV+TVIN+EMPQ A GYVHR+GRTGRAYN+GASVSLVS
Sbjct: 61   SRKHSKQKLDSEFGVVRGIDFKNVHTVINFEMPQNAPGYVHRIGRTGRAYNSGASVSLVS 120

Query: 960  PEEMEIFEEIKSLLGEKESEDSKFIAPFPLLSKNAVESLRYRAEDVSRSVTKIAVRESRA 781
            P+EMEI EEIKS+LG+ E+++S FIAPFPLL+KNAVESLRYRAEDVS+SVTK+AVRESRA
Sbjct: 121  PDEMEILEEIKSILGDDENKESNFIAPFPLLTKNAVESLRYRAEDVSKSVTKLAVRESRA 180

Query: 780  QDLRNEILNSEKLKAHFQDNPRDLDLLKHDKVLSKKQPAAHLRDVPEYLLDPTTKEASKI 601
            QDLRNEILNSEKLKAHF+ N RDLDLLKHDKVLSKK    HLRDVP+YLLDPTT+EASKI
Sbjct: 181  QDLRNEILNSEKLKAHFEVNQRDLDLLKHDKVLSKKPIPTHLRDVPDYLLDPTTQEASKI 240

Query: 600  VKLARAAMGNTGSNRRKVFKGKFKRSRDPLKTFSAEAPKRGQKAGMKRKGKTKDEGH*HQ 421
            VKLARAAMGNT   RR+  + KF++SRDPLKTFSAEAPK+  K G+KRK K  D+ H H+
Sbjct: 241  VKLARAAMGNTNPARRQGSRRKFRKSRDPLKTFSAEAPKKAPKGGVKRKEKDNDDSHKHK 300

Query: 420  NK 415
             K
Sbjct: 301  KK 302


>emb|CBI33259.3| unnamed protein product [Vitis vinifera]
          Length = 8206

 Score =  431 bits (1109), Expect = e-118
 Identities = 225/298 (75%), Positives = 251/298 (84%), Gaps = 1/298 (0%)
 Frame = -2

Query: 1305 FGIKSAVLNAELPVNSRLHILEEFNAGLFDYLIASDVSQSSE-EQNDKEIHAPRXXXXXX 1129
            FGIKSAVLNAELP NSRLHILEEFNAGLFDYLIA+D SQ  E EQ D+            
Sbjct: 7906 FGIKSAVLNAELPQNSRLHILEEFNAGLFDYLIATDGSQPKEKEQADEGSQIEPRKSRKH 7965

Query: 1128 XXXKLDAEFGVVRGIDFKNVYTVINYEMPQTAAGYVHRVGRTGRAYNTGASVSLVSPEEM 949
               KLD+EFGVVRGIDFKNV+TVIN+EMPQ A GYVHR+GRTGRAYNTGASVSLVSP+EM
Sbjct: 7966 SKQKLDSEFGVVRGIDFKNVHTVINFEMPQNAPGYVHRIGRTGRAYNTGASVSLVSPDEM 8025

Query: 948  EIFEEIKSLLGEKESEDSKFIAPFPLLSKNAVESLRYRAEDVSRSVTKIAVRESRAQDLR 769
            EI EEIKS+LG+ E+++S FIAPFPLL+KNAVESLRYRAEDVS+SVTK+AVRESRAQDLR
Sbjct: 8026 EILEEIKSILGDDENKESNFIAPFPLLTKNAVESLRYRAEDVSKSVTKLAVRESRAQDLR 8085

Query: 768  NEILNSEKLKAHFQDNPRDLDLLKHDKVLSKKQPAAHLRDVPEYLLDPTTKEASKIVKLA 589
            NEI+NSEKLKAHF+ N RDLDLLKHDKVLSKK    HLRDVP+YLLDPTT+EASKIVKLA
Sbjct: 8086 NEIVNSEKLKAHFEVNQRDLDLLKHDKVLSKKPIPTHLRDVPDYLLDPTTQEASKIVKLA 8145

Query: 588  RAAMGNTGSNRRKVFKGKFKRSRDPLKTFSAEAPKRGQKAGMKRKGKTKDEGH*HQNK 415
            RAAMGNT   RR+  + KF++SRDPLKTFSAEAPK+  K GMKRK K  D+ H H+ K
Sbjct: 8146 RAAMGNTNPARRQGSRRKFRKSRDPLKTFSAEAPKKASKGGMKRKEKDNDDSHKHKKK 8203


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