BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00005897
         (2532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270186.1| PREDICTED: uncharacterized RNA pseudouridine...   462   e-127
ref|XP_002311995.1| predicted protein [Populus trichocarpa] gi|2...   457   e-126
ref|XP_004140075.1| PREDICTED: uncharacterized RNA pseudouridine...   442   e-121
emb|CBI31423.3| unnamed protein product [Vitis vinifera]              436   e-119
ref|XP_002879786.1| pseudouridine synthase family protein [Arabi...   436   e-119

>ref|XP_002270186.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464 isoform
            1 [Vitis vinifera]
          Length = 393

 Score =  462 bits (1188), Expect = e-127
 Identities = 232/358 (64%), Positives = 273/358 (76%)
 Frame = +3

Query: 192  NTEFNITFAXXXXXXXXXXXSDSDSPSFELGDQLFIPWIVRDESGNLTLKTSPPESFLKT 371
            + EFNI+FA           S +  P  E    L IPWIVRDE+GNL ++++PPE +L+ 
Sbjct: 50   SAEFNISFAPK---------SKNPKPQSET---LLIPWIVRDENGNLRVQSTPPERYLQD 97

Query: 372  LAHQSTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRFYNERFRDPPQRLAKVLATLGV 551
            +A                                  RRFYNE FRDPPQRL+KVLA  GV
Sbjct: 98   MAKAKA---LSAKKKKKKEESTARAVAVEPKYSKAARRFYNENFRDPPQRLSKVLAAAGV 154

Query: 552  ASRRSSEELIFQGKVTVNGSVCNTPQTRVDPGRDIIYVNGSRLTKKVPPKVYLALNKPKG 731
            ASRR+SEELIF+G+VTVNGSVCNTPQTRVDP RD+IYVNG+RL KK+PPKVYLALNKPKG
Sbjct: 155  ASRRNSEELIFEGRVTVNGSVCNTPQTRVDPARDMIYVNGNRLPKKLPPKVYLALNKPKG 214

Query: 732  YICSMGENETKSVISLFDDFMMIWSKKNPRLPKPRLFTVGRLDVGTTGLIIVTNDGDFAH 911
            YICS GE E+KSV+ LFDD++  W+K+NP +PKPR+FTVGRLDV TTGLII+TNDGDFA 
Sbjct: 215  YICSSGEKESKSVLCLFDDYLKSWNKQNPGVPKPRIFTVGRLDVATTGLIILTNDGDFAQ 274

Query: 912  KISHPSSNLSKEYIATISGKINKQHLLAISEGTIVEGVHCTPDLVELLPQQPDISRPRLR 1091
            K+SHPSS LSKEYIATI G +NK+HL+AISEGT++EGVHCTPD VELLP QP+IS+PRLR
Sbjct: 275  KLSHPSSKLSKEYIATIDGVVNKRHLIAISEGTVIEGVHCTPDSVELLPPQPNISKPRLR 334

Query: 1092 IVVHEGRKHEVRELVKHAGLQIHALKRVRIGNFRLPSDLALGKHMELNTANLRALGWK 1265
            +VVHEGR HEVRELVK AGLQIH+LKR+RIG FRLPSDL  GKH+EL   +L+ALGWK
Sbjct: 335  VVVHEGRNHEVRELVKSAGLQIHSLKRIRIGGFRLPSDLGHGKHVELKQGDLKALGWK 392


>ref|XP_002311995.1| predicted protein [Populus trichocarpa] gi|222851815|gb|EEE89362.1|
            predicted protein [Populus trichocarpa]
          Length = 397

 Score =  457 bits (1176), Expect = e-126
 Identities = 232/358 (64%), Positives = 264/358 (73%), Gaps = 2/358 (0%)
 Frame = +3

Query: 198  EFNITFAXXXXXXXXXXXSDSDSPSFELGD-QLFIPWIVRDESGNLTLKTSPPESFLKTL 374
            EFNITFA             +D+ S  L   QLFIPWIVR E GNL L+++PP   +  +
Sbjct: 39   EFNITFAPPKPKPKLPANLQTDAASLSLPPGQLFIPWIVRGEDGNLKLQSNPPARLIHAI 98

Query: 375  AHQSTQ-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRFYNERFRDPPQRLAKVLATLGV 551
            A   TQ                              RRFYNE FRD  QRL+KVLA  GV
Sbjct: 99   ADAKTQPKKKKDKVKKESSGNVKAKLEAEPTRSKAARRFYNENFRDQAQRLSKVLAAAGV 158

Query: 552  ASRRSSEELIFQGKVTVNGSVCNTPQTRVDPGRDIIYVNGSRLTKKVPPKVYLALNKPKG 731
            ASRRSSE LIF+GKVTVNGSVCNTPQTRVDPGRD IYVNG+RL KK+PPK+Y+ALNKPKG
Sbjct: 159  ASRRSSEALIFEGKVTVNGSVCNTPQTRVDPGRDSIYVNGNRLPKKLPPKIYIALNKPKG 218

Query: 732  YICSMGENETKSVISLFDDFMMIWSKKNPRLPKPRLFTVGRLDVGTTGLIIVTNDGDFAH 911
            YICS+GE E+KSV+ L DD+   W K+NP LPKPRLFTVGRLDV TTGLIIVTNDGDFA 
Sbjct: 219  YICSLGEKESKSVMCLLDDYFQSWDKRNPGLPKPRLFTVGRLDVATTGLIIVTNDGDFAQ 278

Query: 912  KISHPSSNLSKEYIATISGKINKQHLLAISEGTIVEGVHCTPDLVELLPQQPDISRPRLR 1091
            +I+HPSSNLSKEYIAT+ G ++K+HL A+SEGT++EGV C PD VELLPQQPD  RPRLR
Sbjct: 279  QIAHPSSNLSKEYIATVDGVVSKRHLFAVSEGTVIEGVRCVPDSVELLPQQPDRPRPRLR 338

Query: 1092 IVVHEGRKHEVRELVKHAGLQIHALKRVRIGNFRLPSDLALGKHMELNTANLRALGWK 1265
            IVVHEGR HEVRELVK+AGL+IH+LKRVRIG FRLPSDL LGKH EL   +L+ LGWK
Sbjct: 339  IVVHEGRNHEVRELVKNAGLEIHSLKRVRIGGFRLPSDLGLGKHAELKQTDLKTLGWK 396


>ref|XP_004140075.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
            [Cucumis sativus] gi|449490423|ref|XP_004158601.1|
            PREDICTED: uncharacterized RNA pseudouridine synthase
            aq_1464-like [Cucumis sativus]
          Length = 398

 Score =  442 bits (1136), Expect = e-121
 Identities = 229/356 (64%), Positives = 259/356 (72%)
 Frame = +3

Query: 198  EFNITFAXXXXXXXXXXXSDSDSPSFELGDQLFIPWIVRDESGNLTLKTSPPESFLKTLA 377
            EFNITFA                     G QLFIPWIVR E GNL L++ PP  FL +++
Sbjct: 49   EFNITFAPPKPKPKSEVEDPFQFIDRNSGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSVS 108

Query: 378  HQSTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRFYNERFRDPPQRLAKVLATLGVAS 557
               T+                             RRFYNE  R+  QRL+KVLA  GVAS
Sbjct: 109  EDETKPKKKKVSAGKPITEPPKHSKAA-------RRFYNENIRESSQRLSKVLAAAGVAS 161

Query: 558  RRSSEELIFQGKVTVNGSVCNTPQTRVDPGRDIIYVNGSRLTKKVPPKVYLALNKPKGYI 737
            RRSSEELIF G+VTVNGSVCNTPQTRVDP RDIIYVNG+RL KK+PPKVYLALNKPKGYI
Sbjct: 162  RRSSEELIFGGRVTVNGSVCNTPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYI 221

Query: 738  CSMGENETKSVISLFDDFMMIWSKKNPRLPKPRLFTVGRLDVGTTGLIIVTNDGDFAHKI 917
            CS G+ E+KSVISLFDD++  W K  P  PKPRLFTVGRLDV TTGLIIVTNDGDFA  I
Sbjct: 222  CSSGKKESKSVISLFDDYLKSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQGI 281

Query: 918  SHPSSNLSKEYIATISGKINKQHLLAISEGTIVEGVHCTPDLVELLPQQPDISRPRLRIV 1097
            SHPSS LSKEYIA I G ++KQ+L+AISEGTI++GVHCTPD VELLP+QPDIS+ RLRIV
Sbjct: 282  SHPSSGLSKEYIAAIDGTVSKQNLIAISEGTIIDGVHCTPDSVELLPRQPDISKSRLRIV 341

Query: 1098 VHEGRKHEVRELVKHAGLQIHALKRVRIGNFRLPSDLALGKHMELNTANLRALGWK 1265
            VHEGR HEVRELVK AGL+I++LKRVRIG FRLPSDL LG + EL  + L+A+GWK
Sbjct: 342  VHEGRNHEVRELVKAAGLEIYSLKRVRIGGFRLPSDLGLGSYTELKQSELKAIGWK 397


>emb|CBI31423.3| unnamed protein product [Vitis vinifera]
          Length = 296

 Score =  436 bits (1121), Expect = e-119
 Identities = 206/262 (78%), Positives = 236/262 (90%)
 Frame = +3

Query: 480  RRFYNERFRDPPQRLAKVLATLGVASRRSSEELIFQGKVTVNGSVCNTPQTRVDPGRDII 659
            RRFYNE FRDPPQRL+KVLA  GVASRR+SEELIF+G+VTVNGSVCNTPQTRVDP RD+I
Sbjct: 34   RRFYNENFRDPPQRLSKVLAAAGVASRRNSEELIFEGRVTVNGSVCNTPQTRVDPARDMI 93

Query: 660  YVNGSRLTKKVPPKVYLALNKPKGYICSMGENETKSVISLFDDFMMIWSKKNPRLPKPRL 839
            YVNG+RL KK+PPKVYLALNKPKGYICS GE E+KSV+ LFDD++  W+K+NP +PKPR+
Sbjct: 94   YVNGNRLPKKLPPKVYLALNKPKGYICSSGEKESKSVLCLFDDYLKSWNKQNPGVPKPRI 153

Query: 840  FTVGRLDVGTTGLIIVTNDGDFAHKISHPSSNLSKEYIATISGKINKQHLLAISEGTIVE 1019
            FTVGRLDV TTGLII+TNDGDFA K+SHPSS LSKEYIATI G +NK+HL+AISEGT++E
Sbjct: 154  FTVGRLDVATTGLIILTNDGDFAQKLSHPSSKLSKEYIATIDGVVNKRHLIAISEGTVIE 213

Query: 1020 GVHCTPDLVELLPQQPDISRPRLRIVVHEGRKHEVRELVKHAGLQIHALKRVRIGNFRLP 1199
            GVHCTPD VELLP QP+IS+PRLR+VVHEGR HEVRELVK AGLQIH+LKR+RIG FRLP
Sbjct: 214  GVHCTPDSVELLPPQPNISKPRLRVVVHEGRNHEVRELVKSAGLQIHSLKRIRIGGFRLP 273

Query: 1200 SDLALGKHMELNTANLRALGWK 1265
            SDL  GKH+EL   +L+ALGWK
Sbjct: 274  SDLGHGKHVELKQGDLKALGWK 295


>ref|XP_002879786.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
            lyrata] gi|297325625|gb|EFH56045.1| pseudouridine
            synthase family protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 412

 Score =  436 bits (1120), Expect = e-119
 Identities = 218/341 (63%), Positives = 252/341 (73%), Gaps = 15/341 (4%)
 Frame = +3

Query: 288  QLFIPWIVRDESGNLTLKTSPPESFLKTLAHQST---------------QXXXXXXXXXX 422
            QLFIPWIVR + G L L++ PP   +  LA  +T               Q          
Sbjct: 71   QLFIPWIVRGDDGTLKLQSQPPARLIHNLAIDATTQNPKKKDKPKKKQPQATSSSASATA 130

Query: 423  XXXXXXXXXXXXXXXXXXXRRFYNERFRDPPQRLAKVLATLGVASRRSSEELIFQGKVTV 602
                               RRFYNE F++PPQRL+KVLA  GVASRR+SEELIF GKVTV
Sbjct: 131  SASSPASHSEVKPKLSKAARRFYNENFKEPPQRLSKVLAAAGVASRRTSEELIFDGKVTV 190

Query: 603  NGSVCNTPQTRVDPGRDIIYVNGSRLTKKVPPKVYLALNKPKGYICSMGENETKSVISLF 782
            NG +CNTPQTRVDP RDIIYVNG+R+ KK+PPKVY ALNKPKGYICS GE E KSVISLF
Sbjct: 191  NGILCNTPQTRVDPSRDIIYVNGNRIPKKLPPKVYFALNKPKGYICSSGEKEIKSVISLF 250

Query: 783  DDFMMIWSKKNPRLPKPRLFTVGRLDVGTTGLIIVTNDGDFAHKISHPSSNLSKEYIATI 962
            D+++  W K+NP  PKPRLFTVGRLDV TTGLI+VTNDGDFA K+SHPSS+L KEYI T+
Sbjct: 251  DEYLSSWDKRNPGTPKPRLFTVGRLDVATTGLIVVTNDGDFAQKLSHPSSSLPKEYITTV 310

Query: 963  SGKINKQHLLAISEGTIVEGVHCTPDLVELLPQQPDISRPRLRIVVHEGRKHEVRELVKH 1142
             G I+K+HL+AISEGTIVEGVHC PD VEL+P+Q DI R RLRIVVHEGR HEVRELVK+
Sbjct: 311  VGDIHKRHLMAISEGTIVEGVHCVPDSVELMPKQHDIPRARLRIVVHEGRNHEVRELVKN 370

Query: 1143 AGLQIHALKRVRIGNFRLPSDLALGKHMELNTANLRALGWK 1265
            AGL++H+LKRVRIG FRLPSDL LGKH+EL  + L+A+GWK
Sbjct: 371  AGLEVHSLKRVRIGGFRLPSDLGLGKHVELKQSELKAMGWK 411