BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00005803
         (1583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002882661.1| transcription initiation factor IIB-2 [Arabi...   450   e-124
ref|NP_187644.1| transcription initiation factor IIB-2 [Arabidop...   448   e-123
ref|XP_004150610.1| PREDICTED: transcription initiation factor I...   447   e-123
ref|XP_002284342.1| PREDICTED: transcription initiation factor I...   445   e-122
ref|XP_002269045.1| PREDICTED: transcription initiation factor I...   444   e-122

>ref|XP_002882661.1| transcription initiation factor IIB-2 [Arabidopsis lyrata subsp.
            lyrata] gi|297328501|gb|EFH58920.1| transcription
            initiation factor IIB-2 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 312

 Score =  450 bits (1158), Expect = e-124
 Identities = 221/315 (70%), Positives = 264/315 (83%), Gaps = 2/315 (0%)
 Frame = +1

Query: 250  MSDSYCSDCKKNTEVVFDHAAGDTVCSECGLVLEARSIDETSEWRTFADDSGDHDPNRVG 429
            MSD++CSDCK++TEVVFDH+AGDTVCSECGLVLE+ SIDETSEWRTFA++SGD+DP RVG
Sbjct: 1    MSDAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 430  GPVNPLLGDAALSTVISR--GANGSNADSSLTRLQNRGGDPDRAIVLAFKTISMMADRLS 603
            GP NPLL D  L+TVIS+  G++G    SSL R QNRG +PDR +++AFKTI+ MADRL 
Sbjct: 61   GPTNPLLADGGLTTVISKPNGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRLG 120

Query: 604  LVTTIKDRASEIYKRLEDQKCTRGRNLEALVAACIYIACRQEGKPRTVKEICSIVAGATK 783
            LV TIKDRA+EIYKR+EDQK +RGRN +AL+AAC+YIACRQE KPRTVKEICS+  GATK
Sbjct: 121  LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 784  KEIGRAKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMSNEEVKAVQETVQKAGDF 963
            KEIGRAKE+IVKQL +E G+S+EMGTIHAGD++RRFCSNLGM+N+ VKA QE+VQK+ +F
Sbjct: 181  KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQESVQKSEEF 240

Query: 964  DXXXXXXXXXXXXXFMITQLSSDKDAKKPLRDISIATTVAEGTIKNAYRDLYPHAAKIIP 1143
            D             ++ITQLS   D KKPLRDIS+AT VAEGTI+N+Y+DLYPH +KIIP
Sbjct: 241  DIRRSPISIAAAVIYIITQLS---DEKKPLRDISVATGVAEGTIRNSYKDLYPHLSKIIP 297

Query: 1144 EWYAKERDLKNLSSP 1188
             WYAKE DLKNL SP
Sbjct: 298  AWYAKEEDLKNLQSP 312


>ref|NP_187644.1| transcription initiation factor IIB-2 [Arabidopsis thaliana]
            gi|21363045|sp|Q9SS44.1|TF2B2_ARATH RecName:
            Full=Transcription initiation factor IIB-2; AltName:
            Full=General transcription factor TFIIB-2; Short=AtTFIIB2
            gi|6056193|gb|AAF02810.1|AC009400_6 transcription
            initiation factor IIB (TFIIB) [Arabidopsis thaliana]
            gi|15215784|gb|AAK91437.1| AT3g10330/F14P13_7
            [Arabidopsis thaliana] gi|16974427|gb|AAL31139.1|
            AT3g10330/F14P13_7 [Arabidopsis thaliana]
            gi|21593436|gb|AAM65403.1| transcription initiation
            factor IIB (TFIIB) [Arabidopsis thaliana]
            gi|39545880|gb|AAR28003.1| TFIIB2 [Arabidopsis thaliana]
            gi|332641371|gb|AEE74892.1| transcription initiation
            factor IIB-2 [Arabidopsis thaliana]
          Length = 312

 Score =  448 bits (1152), Expect = e-123
 Identities = 220/315 (69%), Positives = 263/315 (83%), Gaps = 2/315 (0%)
 Frame = +1

Query: 250  MSDSYCSDCKKNTEVVFDHAAGDTVCSECGLVLEARSIDETSEWRTFADDSGDHDPNRVG 429
            MSD++CSDCK++TEVVFDH+AGDTVCSECGLVLE+ SIDETSEWRTFA++SGD+DP RVG
Sbjct: 1    MSDAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 430  GPVNPLLGDAALSTVISR--GANGSNADSSLTRLQNRGGDPDRAIVLAFKTISMMADRLS 603
            GP NPLL D  L+TVIS+  G++G    SSL R QNRG +PDR +++AFKTI+ MADRL 
Sbjct: 61   GPTNPLLADGGLTTVISKPNGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRLG 120

Query: 604  LVTTIKDRASEIYKRLEDQKCTRGRNLEALVAACIYIACRQEGKPRTVKEICSIVAGATK 783
            LV TIKDRA+EIYKR+EDQK +RGRN +AL+AAC+YIACRQE KPRTVKEICS+  GATK
Sbjct: 121  LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 784  KEIGRAKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMSNEEVKAVQETVQKAGDF 963
            KEIGRAKE+IVKQL +E G+ +EMGTIHAGD++RRFCSNLGM+N+ VKA QE+VQK+ +F
Sbjct: 181  KEIGRAKEYIVKQLGLETGQLVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQESVQKSEEF 240

Query: 964  DXXXXXXXXXXXXXFMITQLSSDKDAKKPLRDISIATTVAEGTIKNAYRDLYPHAAKIIP 1143
            D             ++ITQLS   D KKPLRDIS+AT VAEGTI+N+Y+DLYPH +KIIP
Sbjct: 241  DIRRSPISIAAAVIYIITQLS---DEKKPLRDISVATGVAEGTIRNSYKDLYPHLSKIIP 297

Query: 1144 EWYAKERDLKNLSSP 1188
             WYAKE DLKNL SP
Sbjct: 298  AWYAKEEDLKNLQSP 312


>ref|XP_004150610.1| PREDICTED: transcription initiation factor IIB-2-like [Cucumis
            sativus] gi|449529834|ref|XP_004171903.1| PREDICTED:
            transcription initiation factor IIB-2-like [Cucumis
            sativus]
          Length = 312

 Score =  447 bits (1149), Expect = e-123
 Identities = 219/315 (69%), Positives = 260/315 (82%), Gaps = 2/315 (0%)
 Frame = +1

Query: 250  MSDSYCSDCKKNTEVVFDHAAGDTVCSECGLVLEARSIDETSEWRTFADDSGDHDPNRVG 429
            MSD++CSDCK+ TEVVFDH+AGDTVCSECGLVLE+ SIDETSEWRTFA++SGD+DP RVG
Sbjct: 1    MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 430  GPVNPLLGDAALSTVISR--GANGSNADSSLTRLQNRGGDPDRAIVLAFKTISMMADRLS 603
            GP NPLL D  LSTVI++  G  G    SSL R QNRG +PDR ++LAFKTI+ M+DRL 
Sbjct: 61   GPTNPLLADGGLSTVIAKPNGTTGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 604  LVTTIKDRASEIYKRLEDQKCTRGRNLEALVAACIYIACRQEGKPRTVKEICSIVAGATK 783
            LV TIKDRA+EIYKR+EDQK +RGRN +AL+AAC+YIACRQE KPRTVKEICS+  GATK
Sbjct: 121  LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 784  KEIGRAKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMSNEEVKAVQETVQKAGDF 963
            KEIGRAKE+IVKQL +E G+S+EMGTIHAGD++RRFCSNLGM+N+ VKA QE VQK+ +F
Sbjct: 181  KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240

Query: 964  DXXXXXXXXXXXXXFMITQLSSDKDAKKPLRDISIATTVAEGTIKNAYRDLYPHAAKIIP 1143
            D             ++ITQLS D   KKPL+DIS+AT VAEGTI+N+Y+DLYPH +KI+P
Sbjct: 241  DIRRSPISIAAAVIYIITQLSDD---KKPLKDISVATGVAEGTIRNSYKDLYPHVSKILP 297

Query: 1144 EWYAKERDLKNLSSP 1188
             WYAKE DLKNL SP
Sbjct: 298  GWYAKEEDLKNLCSP 312


>ref|XP_002284342.1| PREDICTED: transcription initiation factor IIB-2 [Vitis vinifera]
            gi|297739630|emb|CBI29812.3| unnamed protein product
            [Vitis vinifera]
          Length = 312

 Score =  445 bits (1144), Expect = e-122
 Identities = 220/315 (69%), Positives = 261/315 (82%), Gaps = 2/315 (0%)
 Frame = +1

Query: 250  MSDSYCSDCKKNTEVVFDHAAGDTVCSECGLVLEARSIDETSEWRTFADDSGDHDPNRVG 429
            M+D++C+DCKKNTEVVFDH+AGDTVCSECGLVLE+ SIDETSEWRTFA++SGD+DP RVG
Sbjct: 1    MADAFCTDCKKNTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 430  GPVNPLLGDAALSTVISR--GANGSNADSSLTRLQNRGGDPDRAIVLAFKTISMMADRLS 603
            GP NPLL D  LSTVI++  G +G    SSL R QNRG +PDR ++LAFKTI+ M+DRL 
Sbjct: 61   GPSNPLLTDGGLSTVIAKPNGVSGDFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 604  LVTTIKDRASEIYKRLEDQKCTRGRNLEALVAACIYIACRQEGKPRTVKEICSIVAGATK 783
            LV TIKDRA+EIYK++EDQK TRGRN +AL+AAC+YIACRQE KPRTVKEICS+  GATK
Sbjct: 121  LVATIKDRANEIYKKVEDQKSTRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 784  KEIGRAKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMSNEEVKAVQETVQKAGDF 963
            KEIGRAKE+IVKQL+ E G+S+EMGTIHAGD++RRFCSNLGM+N+ VKA QE VQK+ +F
Sbjct: 181  KEIGRAKEYIVKQLEAEKGQSVEMGTIHAGDFMRRFCSNLGMTNQVVKAAQEAVQKSEEF 240

Query: 964  DXXXXXXXXXXXXXFMITQLSSDKDAKKPLRDISIATTVAEGTIKNAYRDLYPHAAKIIP 1143
            D             ++ITQLS   D KK LRDISIAT VAEGTI+N+Y+DLYPH +KIIP
Sbjct: 241  DIRRSPVSIAAAVIYIITQLS---DEKKLLRDISIATGVAEGTIRNSYKDLYPHISKIIP 297

Query: 1144 EWYAKERDLKNLSSP 1188
             WYAKE DL+NL SP
Sbjct: 298  SWYAKEEDLRNLCSP 312


>ref|XP_002269045.1| PREDICTED: transcription initiation factor IIB-2 [Vitis vinifera]
            gi|296088031|emb|CBI35314.3| unnamed protein product
            [Vitis vinifera]
          Length = 312

 Score =  444 bits (1141), Expect = e-122
 Identities = 219/315 (69%), Positives = 261/315 (82%), Gaps = 2/315 (0%)
 Frame = +1

Query: 250  MSDSYCSDCKKNTEVVFDHAAGDTVCSECGLVLEARSIDETSEWRTFADDSGDHDPNRVG 429
            M+D++C+DCKKNTEVVFDH+AGDTVCSECGLVLE+ SIDETSEWRTFA++SGD+DP RVG
Sbjct: 1    MADAFCTDCKKNTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 430  GPVNPLLGDAALSTVISR--GANGSNADSSLTRLQNRGGDPDRAIVLAFKTISMMADRLS 603
            GP NPLL D  LSTVI++  G +G    SSL R QNRG +PDR ++LAFKTI+ M+DRL 
Sbjct: 61   GPSNPLLTDGGLSTVIAKPNGVSGDFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 604  LVTTIKDRASEIYKRLEDQKCTRGRNLEALVAACIYIACRQEGKPRTVKEICSIVAGATK 783
            LV TIKDRA+EIYK++EDQK TRGRN +AL+AAC+YIACRQE KPRTVKEICS+  GATK
Sbjct: 121  LVATIKDRANEIYKKVEDQKSTRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 784  KEIGRAKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMSNEEVKAVQETVQKAGDF 963
            KEIGRAKE+IVKQL+ E G+S+EMGTIHAGD++RRFCSNLGM+N+ VKA QE VQK+ +F
Sbjct: 181  KEIGRAKEYIVKQLEAEKGQSVEMGTIHAGDFMRRFCSNLGMTNQVVKAAQEAVQKSEEF 240

Query: 964  DXXXXXXXXXXXXXFMITQLSSDKDAKKPLRDISIATTVAEGTIKNAYRDLYPHAAKIIP 1143
            D             ++ITQLS   D KK LRDISIAT VAEGTI+N+Y+DLYPH ++IIP
Sbjct: 241  DIRRSPVSIAAAVIYIITQLS---DEKKLLRDISIATGVAEGTIRNSYKDLYPHISRIIP 297

Query: 1144 EWYAKERDLKNLSSP 1188
             WYAKE DL+NL SP
Sbjct: 298  SWYAKEEDLRNLCSP 312