BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00005802
         (1442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002882661.1| transcription initiation factor IIB-2 [Arabi...   434   e-119
ref|NP_187644.1| transcription initiation factor IIB-2 [Arabidop...   432   e-118
ref|XP_004150610.1| PREDICTED: transcription initiation factor I...   428   e-117
ref|NP_001238343.1| transcription initiation factor IIB [Glycine...   426   e-117
ref|XP_002284342.1| PREDICTED: transcription initiation factor I...   426   e-116

>ref|XP_002882661.1| transcription initiation factor IIB-2 [Arabidopsis lyrata subsp.
            lyrata] gi|297328501|gb|EFH58920.1| transcription
            initiation factor IIB-2 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 312

 Score =  434 bits (1117), Expect = e-119
 Identities = 219/330 (66%), Positives = 257/330 (77%), Gaps = 2/330 (0%)
 Frame = +2

Query: 155  MSDTYCSDCKRNTEVVFDHAAGDTVCSECGLVLEARSIDETSEWRTFADESGDHDPNRVG 334
            MSD +CSDCKR+TEVVFDH+AGDTVCSECGLVLE+ SIDETSEWRTFA+ESGD+DP RVG
Sbjct: 1    MSDAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 335  GPVNPLLGDGALTTVISR--GANGSNVDSSLARLQNRGGDPDRAIVLAFKTISNMADRLS 508
            GP NPLL DG LTTVIS+  G++G  + SSL R QNRG +PDR +++AFKTI+ MADRL 
Sbjct: 61   GPTNPLLADGGLTTVISKPNGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRLG 120

Query: 509  LVTTIKDRASEIYKRLEDQKCTRGRNLEALVAACIYIACRQEGKPRTVKEICSIVAGATK 688
            LV TIKDRA+EIYKR+EDQK +RGRN +AL+AAC+YIACRQE KPRTVKEICS+  GATK
Sbjct: 121  LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 689  KEIGRAKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMSNEEVKAVQETVQKAGDF 868
            KEIGRAKE+IVKQL +E G+S+EMGTIHAGD++RRFCSNLGM+N+ VKA QE+VQK+ +F
Sbjct: 181  KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQESVQKSEEF 240

Query: 869  DIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQLSNSKKPLRDISLATT 1048
            DI                                        TQLS+ KKPLRDIS+AT 
Sbjct: 241  DI-------------------------RRSPISIAAAVIYIITQLSDEKKPLRDISVATG 275

Query: 1049 VAEGTIKNAYKDLYPHATKIIPEWYAKERD 1138
            VAEGTI+N+YKDLYPH +KIIP WYAKE D
Sbjct: 276  VAEGTIRNSYKDLYPHLSKIIPAWYAKEED 305


>ref|NP_187644.1| transcription initiation factor IIB-2 [Arabidopsis thaliana]
            gi|21363045|sp|Q9SS44.1|TF2B2_ARATH RecName:
            Full=Transcription initiation factor IIB-2; AltName:
            Full=General transcription factor TFIIB-2; Short=AtTFIIB2
            gi|6056193|gb|AAF02810.1|AC009400_6 transcription
            initiation factor IIB (TFIIB) [Arabidopsis thaliana]
            gi|15215784|gb|AAK91437.1| AT3g10330/F14P13_7
            [Arabidopsis thaliana] gi|16974427|gb|AAL31139.1|
            AT3g10330/F14P13_7 [Arabidopsis thaliana]
            gi|21593436|gb|AAM65403.1| transcription initiation
            factor IIB (TFIIB) [Arabidopsis thaliana]
            gi|39545880|gb|AAR28003.1| TFIIB2 [Arabidopsis thaliana]
            gi|332641371|gb|AEE74892.1| transcription initiation
            factor IIB-2 [Arabidopsis thaliana]
          Length = 312

 Score =  432 bits (1111), Expect = e-118
 Identities = 218/330 (66%), Positives = 256/330 (77%), Gaps = 2/330 (0%)
 Frame = +2

Query: 155  MSDTYCSDCKRNTEVVFDHAAGDTVCSECGLVLEARSIDETSEWRTFADESGDHDPNRVG 334
            MSD +CSDCKR+TEVVFDH+AGDTVCSECGLVLE+ SIDETSEWRTFA+ESGD+DP RVG
Sbjct: 1    MSDAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 335  GPVNPLLGDGALTTVISR--GANGSNVDSSLARLQNRGGDPDRAIVLAFKTISNMADRLS 508
            GP NPLL DG LTTVIS+  G++G  + SSL R QNRG +PDR +++AFKTI+ MADRL 
Sbjct: 61   GPTNPLLADGGLTTVISKPNGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRLG 120

Query: 509  LVTTIKDRASEIYKRLEDQKCTRGRNLEALVAACIYIACRQEGKPRTVKEICSIVAGATK 688
            LV TIKDRA+EIYKR+EDQK +RGRN +AL+AAC+YIACRQE KPRTVKEICS+  GATK
Sbjct: 121  LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 689  KEIGRAKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMSNEEVKAVQETVQKAGDF 868
            KEIGRAKE+IVKQL +E G+ +EMGTIHAGD++RRFCSNLGM+N+ VKA QE+VQK+ +F
Sbjct: 181  KEIGRAKEYIVKQLGLETGQLVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQESVQKSEEF 240

Query: 869  DIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQLSNSKKPLRDISLATT 1048
            DI                                        TQLS+ KKPLRDIS+AT 
Sbjct: 241  DI-------------------------RRSPISIAAAVIYIITQLSDEKKPLRDISVATG 275

Query: 1049 VAEGTIKNAYKDLYPHATKIIPEWYAKERD 1138
            VAEGTI+N+YKDLYPH +KIIP WYAKE D
Sbjct: 276  VAEGTIRNSYKDLYPHLSKIIPAWYAKEED 305


>ref|XP_004150610.1| PREDICTED: transcription initiation factor IIB-2-like [Cucumis
            sativus] gi|449529834|ref|XP_004171903.1| PREDICTED:
            transcription initiation factor IIB-2-like [Cucumis
            sativus]
          Length = 312

 Score =  428 bits (1101), Expect = e-117
 Identities = 215/330 (65%), Positives = 253/330 (76%), Gaps = 2/330 (0%)
 Frame = +2

Query: 155  MSDTYCSDCKRNTEVVFDHAAGDTVCSECGLVLEARSIDETSEWRTFADESGDHDPNRVG 334
            MSD +CSDCKR TEVVFDH+AGDTVCSECGLVLE+ SIDETSEWRTFA+ESGD+DP RVG
Sbjct: 1    MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 335  GPVNPLLGDGALTTVISR--GANGSNVDSSLARLQNRGGDPDRAIVLAFKTISNMADRLS 508
            GP NPLL DG L+TVI++  G  G  + SSL R QNRG +PDR ++LAFKTI+ M+DRL 
Sbjct: 61   GPTNPLLADGGLSTVIAKPNGTTGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 509  LVTTIKDRASEIYKRLEDQKCTRGRNLEALVAACIYIACRQEGKPRTVKEICSIVAGATK 688
            LV TIKDRA+EIYKR+EDQK +RGRN +AL+AAC+YIACRQE KPRTVKEICS+  GATK
Sbjct: 121  LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 689  KEIGRAKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMSNEEVKAVQETVQKAGDF 868
            KEIGRAKE+IVKQL +E G+S+EMGTIHAGD++RRFCSNLGM+N+ VKA QE VQK+ +F
Sbjct: 181  KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240

Query: 869  DIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQLSNSKKPLRDISLATT 1048
            DI                                        TQLS+ KKPL+DIS+AT 
Sbjct: 241  DI-------------------------RRSPISIAAAVIYIITQLSDDKKPLKDISVATG 275

Query: 1049 VAEGTIKNAYKDLYPHATKIIPEWYAKERD 1138
            VAEGTI+N+YKDLYPH +KI+P WYAKE D
Sbjct: 276  VAEGTIRNSYKDLYPHVSKILPGWYAKEED 305


>ref|NP_001238343.1| transcription initiation factor IIB [Glycine max]
            gi|1351222|sp|P48513.1|TF2B_SOYBN RecName:
            Full=Transcription initiation factor IIB; AltName:
            Full=General transcription factor TFIIB
            gi|945087|gb|AAB09756.1| transcription factor TFIIB
            [Glycine max]
          Length = 313

 Score =  426 bits (1095), Expect = e-117
 Identities = 216/331 (65%), Positives = 252/331 (76%), Gaps = 3/331 (0%)
 Frame = +2

Query: 155  MSDTYCSDCKRNTEVVFDHAAGDTVCSECGLVLEARSIDETSEWRTFADESGDHDPNRVG 334
            MSD +CSDCKR TEVVFDH+AGDTVCSECGLVLE+ SIDETSEWRTFA+ESGD+DPNRVG
Sbjct: 1    MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPNRVG 60

Query: 335  GPVNPLLGDGALTTVISR---GANGSNVDSSLARLQNRGGDPDRAIVLAFKTISNMADRL 505
            GP NPLL DG L+TVI++   G  G  + SSL R QNRG +PDRA++ AFKTI+ M+DRL
Sbjct: 61   GPSNPLLTDGGLSTVIAKPNGGGGGEFLSSSLGRWQNRGSNPDRALIQAFKTIATMSDRL 120

Query: 506  SLVTTIKDRASEIYKRLEDQKCTRGRNLEALVAACIYIACRQEGKPRTVKEICSIVAGAT 685
             LV TIKDRA+EIYKR+EDQK +RGRN +AL+AAC+YIACRQE KPRTVKEICS+  GAT
Sbjct: 121  GLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGAT 180

Query: 686  KKEIGRAKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMSNEEVKAVQETVQKAGD 865
            KKEIGRAKE+IVKQL +E G ++EMGTIHAGD++RRFCSNL M+N+ VKA QE VQK+ +
Sbjct: 181  KKEIGRAKEYIVKQLGLENGNAVEMGTIHAGDFMRRFCSNLCMNNQAVKAAQEAVQKSEE 240

Query: 866  FDIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQLSNSKKPLRDISLAT 1045
            FDI                                        TQLS+ KKPL+DISLAT
Sbjct: 241  FDI-------------------------RRSPISIAAAVIYIITQLSDDKKPLKDISLAT 275

Query: 1046 TVAEGTIKNAYKDLYPHATKIIPEWYAKERD 1138
             VAEGTI+N+YKDLYPH +KIIP WYAKE D
Sbjct: 276  GVAEGTIRNSYKDLYPHVSKIIPNWYAKEED 306


>ref|XP_002284342.1| PREDICTED: transcription initiation factor IIB-2 [Vitis vinifera]
            gi|297739630|emb|CBI29812.3| unnamed protein product
            [Vitis vinifera]
          Length = 312

 Score =  426 bits (1094), Expect = e-116
 Identities = 214/330 (64%), Positives = 254/330 (76%), Gaps = 2/330 (0%)
 Frame = +2

Query: 155  MSDTYCSDCKRNTEVVFDHAAGDTVCSECGLVLEARSIDETSEWRTFADESGDHDPNRVG 334
            M+D +C+DCK+NTEVVFDH+AGDTVCSECGLVLE+ SIDETSEWRTFA+ESGD+DP RVG
Sbjct: 1    MADAFCTDCKKNTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 335  GPVNPLLGDGALTTVISR--GANGSNVDSSLARLQNRGGDPDRAIVLAFKTISNMADRLS 508
            GP NPLL DG L+TVI++  G +G  + SSL R QNRG +PDR ++LAFKTI+ M+DRL 
Sbjct: 61   GPSNPLLTDGGLSTVIAKPNGVSGDFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 509  LVTTIKDRASEIYKRLEDQKCTRGRNLEALVAACIYIACRQEGKPRTVKEICSIVAGATK 688
            LV TIKDRA+EIYK++EDQK TRGRN +AL+AAC+YIACRQE KPRTVKEICS+  GATK
Sbjct: 121  LVATIKDRANEIYKKVEDQKSTRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 689  KEIGRAKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMSNEEVKAVQETVQKAGDF 868
            KEIGRAKE+IVKQL+ E G+S+EMGTIHAGD++RRFCSNLGM+N+ VKA QE VQK+ +F
Sbjct: 181  KEIGRAKEYIVKQLEAEKGQSVEMGTIHAGDFMRRFCSNLGMTNQVVKAAQEAVQKSEEF 240

Query: 869  DIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQLSNSKKPLRDISLATT 1048
            DI                                        TQLS+ KK LRDIS+AT 
Sbjct: 241  DI-------------------------RRSPVSIAAAVIYIITQLSDEKKLLRDISIATG 275

Query: 1049 VAEGTIKNAYKDLYPHATKIIPEWYAKERD 1138
            VAEGTI+N+YKDLYPH +KIIP WYAKE D
Sbjct: 276  VAEGTIRNSYKDLYPHISKIIPSWYAKEED 305