BLASTX nr result

ID: Scutellaria24_contig00005771 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00005771
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272246.1| PREDICTED: probable small nuclear ribonucleo...   117   1e-24
ref|XP_004146017.1| PREDICTED: LOW QUALITY PROTEIN: probable sma...   116   2e-24
gb|ABA95170.1| small nuclear ribonucleoprotein F, putative, expr...   115   4e-24
ref|NP_001068396.1| Os11g0657300 [Oryza sativa Japonica Group] g...   115   4e-24
ref|NP_001046068.1| Os02g0177500 [Oryza sativa Japonica Group] g...   115   4e-24

>ref|XP_002272246.1| PREDICTED: probable small nuclear ribonucleoprotein F [Vitis
           vinifera] gi|296083390|emb|CBI23345.3| unnamed protein
           product [Vitis vinifera]
          Length = 88

 Score =  117 bits (293), Expect = 1e-24
 Identities = 55/60 (91%), Positives = 59/60 (98%)
 Frame = -1

Query: 425 KPVMVKLKWGMEYKGFLVSVDSYMNLQLANAEEYIDGQCTGSLGEILIRCNNVLYLRGVP 246
           KPV+VKLKWGMEYKG+LVSVDSYMNLQLAN+EEYIDGQ TG+LGEILIRCNNVLYLRGVP
Sbjct: 18  KPVIVKLKWGMEYKGYLVSVDSYMNLQLANSEEYIDGQFTGNLGEILIRCNNVLYLRGVP 77


>ref|XP_004146017.1| PREDICTED: LOW QUALITY PROTEIN: probable small nuclear
           ribonucleoprotein F-like [Cucumis sativus]
           gi|449503654|ref|XP_004162110.1| PREDICTED: LOW QUALITY
           PROTEIN: probable small nuclear ribonucleoprotein F-like
           [Cucumis sativus]
          Length = 88

 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/60 (93%), Positives = 57/60 (95%)
 Frame = -1

Query: 425 KPVMVKLKWGMEYKGFLVSVDSYMNLQLANAEEYIDGQCTGSLGEILIRCNNVLYLRGVP 246
           K V+VKLKWGMEYKGFLVSVDSYMNLQLAN EEYIDGQ TGSLGEILIRCNNVLYLRGVP
Sbjct: 18  KTVVVKLKWGMEYKGFLVSVDSYMNLQLANTEEYIDGQFTGSLGEILIRCNNVLYLRGVP 77


>gb|ABA95170.1| small nuclear ribonucleoprotein F, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 85

 Score =  115 bits (288), Expect = 4e-24
 Identities = 54/60 (90%), Positives = 58/60 (96%)
 Frame = -1

Query: 425 KPVMVKLKWGMEYKGFLVSVDSYMNLQLANAEEYIDGQCTGSLGEILIRCNNVLYLRGVP 246
           KPV+VKLKWGMEYKG+LVSVDSYMNLQLAN EEYIDGQ +G+LGEILIRCNNVLYLRGVP
Sbjct: 17  KPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLGEILIRCNNVLYLRGVP 76


>ref|NP_001068396.1| Os11g0657300 [Oryza sativa Japonica Group]
           gi|77552372|gb|ABA95169.1| small nuclear
           ribonucleoprotein F, putative, expressed [Oryza sativa
           Japonica Group] gi|113645618|dbj|BAF28759.1|
           Os11g0657300 [Oryza sativa Japonica Group]
           gi|215693012|dbj|BAG88432.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218186140|gb|EEC68567.1| hypothetical protein
           OsI_36896 [Oryza sativa Indica Group]
           gi|222616369|gb|EEE52501.1| hypothetical protein
           OsJ_34703 [Oryza sativa Japonica Group]
          Length = 86

 Score =  115 bits (288), Expect = 4e-24
 Identities = 54/60 (90%), Positives = 58/60 (96%)
 Frame = -1

Query: 425 KPVMVKLKWGMEYKGFLVSVDSYMNLQLANAEEYIDGQCTGSLGEILIRCNNVLYLRGVP 246
           KPV+VKLKWGMEYKG+LVSVDSYMNLQLAN EEYIDGQ +G+LGEILIRCNNVLYLRGVP
Sbjct: 18  KPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLGEILIRCNNVLYLRGVP 77


>ref|NP_001046068.1| Os02g0177500 [Oryza sativa Japonica Group]
           gi|50252055|dbj|BAD27986.1| putative small nuclear
           ribonucleoprotein polypeptide F [Oryza sativa Japonica
           Group] gi|113535599|dbj|BAF07982.1| Os02g0177500 [Oryza
           sativa Japonica Group]
          Length = 86

 Score =  115 bits (288), Expect = 4e-24
 Identities = 54/60 (90%), Positives = 58/60 (96%)
 Frame = -1

Query: 425 KPVMVKLKWGMEYKGFLVSVDSYMNLQLANAEEYIDGQCTGSLGEILIRCNNVLYLRGVP 246
           KPV+VKLKWGMEYKG+LVSVDSYMNLQLAN EEYIDGQ +G+LGEILIRCNNVLYLRGVP
Sbjct: 18  KPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLGEILIRCNNVLYLRGVP 77


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