BLASTX nr result

ID: Scutellaria24_contig00005556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00005556
         (1065 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADW66146.1| RING-H2 zinc finger protein [Solanum nigrum]           198   2e-48
ref|XP_002533895.1| RING-H2 finger protein ATL3J, putative [Rici...   171   2e-40
ref|NP_001236683.1| uncharacterized protein LOC100305532 [Glycin...   171   3e-40
ref|XP_002321207.1| predicted protein [Populus trichocarpa] gi|2...   170   5e-40
ref|NP_001240255.1| uncharacterized protein LOC100786803 [Glycin...   166   7e-39

>gb|ADW66146.1| RING-H2 zinc finger protein [Solanum nigrum]
          Length = 144

 Score =  198 bits (503), Expect = 2e-48
 Identities = 93/144 (64%), Positives = 114/144 (79%), Gaps = 1/144 (0%)
 Frame = -3

Query: 904 MAISSIPTPADAGVLCVILANTAISISIVKEILRSILHVIGIRIASWDELSVD-PSDSAE 728
           M +S   TPADAGV CVIL NTA SISIVK ++RSILHVIGI  ASW+E S++ P D  E
Sbjct: 1   MGLSPYTTPADAGVFCVILVNTATSISIVKGMVRSILHVIGINFASWEEYSIEGPLDPFE 60

Query: 727 CRKSLSESYMEEFRSRIPALRFESLSVQDCLRQECSICLSEFAPNAEVNNLCCGHVFHKR 548
           CR S S SYMEEFRSR PA+R++SL + +   QEC +CL++F  +AE+N+L CGHVFHK 
Sbjct: 61  CRGSPSGSYMEEFRSRTPAVRYDSLCISNLPTQECPVCLADFNHDAEINHLSCGHVFHKL 120

Query: 547 CLEKWLKYWNITCPLCRNFMMPQE 476
           CLEKWLK WN+TCPLCR+++MPQE
Sbjct: 121 CLEKWLKNWNVTCPLCRDYIMPQE 144


>ref|XP_002533895.1| RING-H2 finger protein ATL3J, putative [Ricinus communis]
           gi|223526146|gb|EEF28485.1| RING-H2 finger protein
           ATL3J, putative [Ricinus communis]
          Length = 156

 Score =  171 bits (434), Expect = 2e-40
 Identities = 81/155 (52%), Positives = 111/155 (71%), Gaps = 6/155 (3%)
 Frame = -3

Query: 904 MAISSIPTPADAGVLCVILANTAISISIVKEILRSILHVIGIRIASWD------ELSVDP 743
           M +SS+P P++ GVLCV+L NTA+SISI K I+RSILH++GIR++S        + + DP
Sbjct: 1   MGLSSLPAPSE-GVLCVLLVNTALSISIFKGIVRSILHIVGIRLSSSSSSTASSDYNEDP 59

Query: 742 SDSAECRKSLSESYMEEFRSRIPALRFESLSVQDCLRQECSICLSEFAPNAEVNNLCCGH 563
           +D  E R   SESY+ EFRSR PA RF+S+     +  +CS+CL+ F P +E+N L CGH
Sbjct: 60  TDLFEFRLPPSESYINEFRSRTPATRFDSVCRCKQIEHDCSVCLTRFEPESEINCLSCGH 119

Query: 562 VFHKRCLEKWLKYWNITCPLCRNFMMPQESEDDTC 458
           +FHK CLEKWL YWN+TCPLCR+ ++P E +  +C
Sbjct: 120 LFHKVCLEKWLDYWNVTCPLCRSPVIPSEEDTSSC 154


>ref|NP_001236683.1| uncharacterized protein LOC100305532 [Glycine max]
           gi|255625823|gb|ACU13256.1| unknown [Glycine max]
          Length = 154

 Score =  171 bits (433), Expect = 3e-40
 Identities = 86/154 (55%), Positives = 110/154 (71%), Gaps = 6/154 (3%)
 Frame = -3

Query: 904 MAISSIPTPADAGVLCVILANTAISISIVKEILRSILHVIGIRI--ASWDELSVDPSDSA 731
           M +SS+P P++ GVLCV+L NT +SISI K I+R+ILH++GI +  +S    S DPS +A
Sbjct: 1   MGLSSLPAPSE-GVLCVLLVNTVLSISIFKGIVRTILHIVGIHLPSSSTSPSSPDPSQAA 59

Query: 730 ----ECRKSLSESYMEEFRSRIPALRFESLSVQDCLRQECSICLSEFAPNAEVNNLCCGH 563
               E   S SESY+EEFRSR P LRF+S+     L  +CS+CL++F P +E+N L CGH
Sbjct: 60  PESFELHLSPSESYIEEFRSRTPTLRFDSVCCSKRLEHDCSVCLTQFEPESEINRLSCGH 119

Query: 562 VFHKRCLEKWLKYWNITCPLCRNFMMPQESEDDT 461
           +FHK CLEKWL YWNITCPLCR  +MP   EDDT
Sbjct: 120 LFHKVCLEKWLDYWNITCPLCRTPLMP---EDDT 150


>ref|XP_002321207.1| predicted protein [Populus trichocarpa] gi|222861980|gb|EEE99522.1|
           predicted protein [Populus trichocarpa]
          Length = 153

 Score =  170 bits (431), Expect = 5e-40
 Identities = 81/154 (52%), Positives = 114/154 (74%), Gaps = 5/154 (3%)
 Frame = -3

Query: 904 MAISSIPTPADAGVLCVILANTAISISIVKEILRSILHVIGIRIASWDEL-----SVDPS 740
           M +SS+P P++ GVLCV+L NTA+SISIVK I+RSILH++GIR++    L     + D  
Sbjct: 1   MGLSSLPAPSE-GVLCVLLVNTALSISIVKGIVRSILHIVGIRLSPSASLPSSDNAEDTR 59

Query: 739 DSAECRKSLSESYMEEFRSRIPALRFESLSVQDCLRQECSICLSEFAPNAEVNNLCCGHV 560
           +S E R S  E+Y+EEFRSR+P++RF ++   +    +CS+CL++F P +E+N+L CGH+
Sbjct: 60  ESLEFRLSPPENYIEEFRSRMPSIRFNTVCSCEQPEHDCSVCLTQFEPESEINSLSCGHI 119

Query: 559 FHKRCLEKWLKYWNITCPLCRNFMMPQESEDDTC 458
           FHK CLEKWL YWNITCPLCR  ++P+  ED +C
Sbjct: 120 FHKMCLEKWLDYWNITCPLCRTPLLPE--EDASC 151


>ref|NP_001240255.1| uncharacterized protein LOC100786803 [Glycine max]
           gi|255639664|gb|ACU20126.1| unknown [Glycine max]
          Length = 155

 Score =  166 bits (421), Expect = 7e-39
 Identities = 85/155 (54%), Positives = 109/155 (70%), Gaps = 7/155 (4%)
 Frame = -3

Query: 904 MAISSIPTPADAGVLCVILANTAISISIVKEILRSILHVIGIRIASWDELSV---DPS-- 740
           M +SS+P P++ GVLCV+L NT +SISI K I+R+ILH++GI ++S    S    DPS  
Sbjct: 1   MGLSSLPAPSE-GVLCVLLVNTVLSISIFKGIVRTILHIVGIHLSSSSSTSPSSPDPSLT 59

Query: 739 --DSAECRKSLSESYMEEFRSRIPALRFESLSVQDCLRQECSICLSEFAPNAEVNNLCCG 566
             +S E   S SESY+EEFRSR P LRF+S+        +CS+CL++F P +E+N L CG
Sbjct: 60  APESFEFHLSPSESYIEEFRSRTPTLRFDSVCCCKQPEHDCSVCLTQFEPESEINRLSCG 119

Query: 565 HVFHKRCLEKWLKYWNITCPLCRNFMMPQESEDDT 461
           H+FHK CLEKWL YWNITCPLCR  +MP   EDDT
Sbjct: 120 HLFHKVCLEKWLDYWNITCPLCRTPLMP---EDDT 151


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