BLASTX nr result

ID: Scutellaria24_contig00005549 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00005549
         (1185 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79067.1| hypothetical protein VITISV_043720 [Vitis vinifera]   263   5e-68
ref|XP_003528193.1| PREDICTED: E3 ubiquitin-protein ligase RMA1 ...   241   3e-61
ref|XP_003523865.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   239   8e-61
gb|ACU16582.1| unknown [Glycine max]                                  238   2e-60
ref|XP_002302470.1| predicted protein [Populus trichocarpa] gi|2...   237   4e-60

>emb|CAN79067.1| hypothetical protein VITISV_043720 [Vitis vinifera]
          Length = 232

 Score =  263 bits (673), Expect = 5e-68
 Identities = 134/220 (60%), Positives = 142/220 (64%), Gaps = 1/220 (0%)
 Frame = -2

Query: 1115 MASGFGEXXXXXXXXXXXXXXXXXNGDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKW 936
            M SGFGE                 N DAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKW
Sbjct: 1    MTSGFGESTSRPPQSPSFSSNNGSNSDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKW 60

Query: 935  LHIHSHSQECPVCKALIEEEKLVPLYGRGKNSTDPRSKSIPGMEIPHRPTGQRPETXXXX 756
            LHIHSHSQECPVCKAL+EEEKLVPLYGRGK STDPRSKSIPG+ IP+RPTGQRPET    
Sbjct: 61   LHIHSHSQECPVCKALVEEEKLVPLYGRGKTSTDPRSKSIPGINIPNRPTGQRPETAPPP 120

Query: 755  XXXXXXXXXPFMHQXXXXXXXXXXXXXXXXXXXXXXGNFTLSAALGGLLPSFFNIHVHGF 576
                        H                       GNFTLSAA GGL PS FN+ VHGF
Sbjct: 121  DAN---------HFMQHGFGFMGGLGGFAPMATARFGNFTLSAAFGGLFPSLFNLQVHGF 171

Query: 575  PNHNLYGAAHGFPYGHSNAYHGVHAQRVPHH-GNQQQQAD 459
            P+  +YG A GFPYG SN++HG HA   P H   Q QQAD
Sbjct: 172  PDATMYGPAAGFPYGFSNSFHGGHAHGFPQHPPTQGQQAD 211


>ref|XP_003528193.1| PREDICTED: E3 ubiquitin-protein ligase RMA1 isoform 1 [Glycine max]
            gi|356519064|ref|XP_003528194.1| PREDICTED: E3
            ubiquitin-protein ligase RMA1 isoform 2 [Glycine max]
          Length = 231

 Score =  241 bits (615), Expect = 3e-61
 Identities = 120/217 (55%), Positives = 134/217 (61%)
 Frame = -2

Query: 1115 MASGFGEXXXXXXXXXXXXXXXXXNGDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKW 936
            MASGFGE                   DA NFECNICF+LAQDPI+TLCGHLFCWPCLYKW
Sbjct: 1    MASGFGESTGRSPPSPSYFNNNNN-SDAANFECNICFELAQDPIITLCGHLFCWPCLYKW 59

Query: 935  LHIHSHSQECPVCKALIEEEKLVPLYGRGKNSTDPRSKSIPGMEIPHRPTGQRPETXXXX 756
            LH HS S+ECPVCKAL+EEEKLVPLYGRGK+STDPRSKSIPG+ IPHRP GQRPET    
Sbjct: 60   LHFHSQSRECPVCKALVEEEKLVPLYGRGKSSTDPRSKSIPGVNIPHRPAGQRPET---- 115

Query: 755  XXXXXXXXXPFMHQXXXXXXXXXXXXXXXXXXXXXXGNFTLSAALGGLLPSFFNIHVHGF 576
                        HQ                      GNF LSAA GG +PS FN  +HGF
Sbjct: 116  ---APPPETNHFHQHGFGFMGGLGGFVPPPMATTRFGNFALSAAFGGFIPSLFNFQMHGF 172

Query: 575  PNHNLYGAAHGFPYGHSNAYHGVHAQRVPHHGNQQQQ 465
             +  +YG   GFP+G +N +HGVHA   P   +Q QQ
Sbjct: 173  HDAAMYGGGAGFPHGFANTFHGVHAHGFPLRTHQGQQ 209


>ref|XP_003523865.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like isoform 1 [Glycine
            max] gi|356510278|ref|XP_003523866.1| PREDICTED: E3
            ubiquitin-protein ligase RMA1H1-like isoform 2 [Glycine
            max]
          Length = 231

 Score =  239 bits (611), Expect = 8e-61
 Identities = 120/217 (55%), Positives = 133/217 (61%)
 Frame = -2

Query: 1115 MASGFGEXXXXXXXXXXXXXXXXXNGDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKW 936
            MASGFGE                   DA NFECNICF+LAQDPI+TLCGHLFCWPCLYKW
Sbjct: 1    MASGFGESTGRSPPSPSYFNNNNN-NDAANFECNICFELAQDPIITLCGHLFCWPCLYKW 59

Query: 935  LHIHSHSQECPVCKALIEEEKLVPLYGRGKNSTDPRSKSIPGMEIPHRPTGQRPETXXXX 756
            LH HS S+ECPVCKAL+EEEKLVPLYGRGK+STDPRSKSIPG  IPHRP GQRPET    
Sbjct: 60   LHFHSQSRECPVCKALVEEEKLVPLYGRGKSSTDPRSKSIPGDNIPHRPAGQRPET---- 115

Query: 755  XXXXXXXXXPFMHQXXXXXXXXXXXXXXXXXXXXXXGNFTLSAALGGLLPSFFNIHVHGF 576
                        HQ                      GNF LSAA GG +PS FN  +HGF
Sbjct: 116  ---APPPETNHFHQHGFGFMGGLGGFAPPPMATTRFGNFALSAAFGGFIPSLFNFQLHGF 172

Query: 575  PNHNLYGAAHGFPYGHSNAYHGVHAQRVPHHGNQQQQ 465
             +  +YG   GFP+G +N +HGVHA   P   +Q QQ
Sbjct: 173  HDAAMYGGGAGFPHGFANTFHGVHAHGFPLRTHQGQQ 209


>gb|ACU16582.1| unknown [Glycine max]
          Length = 231

 Score =  238 bits (608), Expect = 2e-60
 Identities = 119/217 (54%), Positives = 133/217 (61%)
 Frame = -2

Query: 1115 MASGFGEXXXXXXXXXXXXXXXXXNGDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKW 936
            MASGFGE                   DA NFECNICF+LAQ PI+TLCGHLFCWPCLYKW
Sbjct: 1    MASGFGESTGRSPPSPSYFNNNNN-SDAANFECNICFELAQGPIITLCGHLFCWPCLYKW 59

Query: 935  LHIHSHSQECPVCKALIEEEKLVPLYGRGKNSTDPRSKSIPGMEIPHRPTGQRPETXXXX 756
            LH HS S+ECPVCKAL+EEEKLVPLYGRGK+STDPRSKSIPG+ IPHRP GQRPET    
Sbjct: 60   LHFHSQSRECPVCKALVEEEKLVPLYGRGKSSTDPRSKSIPGVNIPHRPAGQRPET---- 115

Query: 755  XXXXXXXXXPFMHQXXXXXXXXXXXXXXXXXXXXXXGNFTLSAALGGLLPSFFNIHVHGF 576
                        HQ                      GNF LSAA GG +PS FN  +HGF
Sbjct: 116  ---APPPETNHFHQHGFGFMGGLGGFVPPPMATTRFGNFALSAAFGGFIPSLFNFQMHGF 172

Query: 575  PNHNLYGAAHGFPYGHSNAYHGVHAQRVPHHGNQQQQ 465
             +  +YG   GFP+G +N +HGVHA   P   +Q QQ
Sbjct: 173  HDAAMYGGGAGFPHGFANTFHGVHAHGFPLRTHQGQQ 209


>ref|XP_002302470.1| predicted protein [Populus trichocarpa] gi|222844196|gb|EEE81743.1|
            predicted protein [Populus trichocarpa]
          Length = 227

 Score =  237 bits (605), Expect = 4e-60
 Identities = 125/217 (57%), Positives = 136/217 (62%), Gaps = 1/217 (0%)
 Frame = -2

Query: 1115 MASGFGEXXXXXXXXXXXXXXXXXNGDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKW 936
            MASGFGE                  GDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKW
Sbjct: 1    MASGFGESTSRAPHNSSFTSNNGN-GDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKW 59

Query: 935  LHIHSHSQECPVCKALIEEEKLVPLYGRGKNSTDPRSKSIPGMEIPHRPTGQRPETXXXX 756
            LH HS S+ECPVCKAL+EEEKLVPLYGRGK STDPRSKSIPG+ IP+RP GQRPET    
Sbjct: 60   LHFHSKSRECPVCKALVEEEKLVPLYGRGKTSTDPRSKSIPGVNIPNRPAGQRPETAPPP 119

Query: 755  XXXXXXXXXPFMHQXXXXXXXXXXXXXXXXXXXXXXGNFTLSAALGGLLPSFFNIHVHGF 576
                        H                       GNFT SAA GGL+PS FN+ VHGF
Sbjct: 120  EPN---------HFGQHGFGFMGGLGGFAPMATARLGNFTFSAAFGGLIPSLFNLQVHGF 170

Query: 575  PNHNLYGAAHGFPYGHSNAYHGVHAQRV-PHHGNQQQ 468
            P+  +YG A G+PYG  N++HG H      HHG  QQ
Sbjct: 171  PDAAMYGPA-GYPYGF-NSFHGGHPHGYRQHHGQGQQ 205


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