BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00005523
         (902 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234106.1| U1 small nuclear ribonucleoprotein C-like [S...   139   1e-30
ref|XP_002520698.1| U1 small nuclear ribonucleoprotein C, putati...   125   1e-26
ref|XP_004148886.1| PREDICTED: U1 small nuclear ribonucleoprotei...   123   5e-26
gb|AFK36549.1| unknown [Lotus japonicus]                              123   5e-26
gb|AFW65851.1| hypothetical protein ZEAMMB73_580988 [Zea mays]        123   7e-26

>ref|NP_001234106.1| U1 small nuclear ribonucleoprotein C-like [Solanum lycopersicum]
           gi|62751087|dbj|BAD95791.1| similar to u1 small nuclear
           ribonucleoprotein C [Solanum lycopersicum]
          Length = 197

 Score =  139 bits (349), Expect = 1e-30
 Identities = 65/78 (83%), Positives = 68/78 (87%), Gaps = 2/78 (2%)
 Frame = -1

Query: 797 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRNYYQQYEAQLNQSLIDQKVKEHLGA 618
           MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHK NVR YYQQ+EAQLNQSLIDQKVKEHLGA
Sbjct: 1   MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKGNVRTYYQQFEAQLNQSLIDQKVKEHLGA 60

Query: 617 FRPPVASY--ARPGMPVL 570
           FRP    +   RPG+P L
Sbjct: 61  FRPVGLPFPQLRPGLPGL 78


>ref|XP_002520698.1| U1 small nuclear ribonucleoprotein C, putative [Ricinus communis]
           gi|223540083|gb|EEF41660.1| U1 small nuclear
           ribonucleoprotein C, putative [Ricinus communis]
          Length = 206

 Score =  125 bits (314), Expect = 1e-26
 Identities = 61/84 (72%), Positives = 68/84 (80%), Gaps = 8/84 (9%)
 Frame = -1

Query: 797 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRNYYQQYEAQLNQSLIDQKVKEHLG- 621
           MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQ+E Q  QSLIDQ++KEHLG 
Sbjct: 1   MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60

Query: 620 --AFRPPVASY-----ARPGMPVL 570
             AF+   A+Y      RP +PVL
Sbjct: 61  AAAFQQVGAAYNQHLLQRPRLPVL 84


>ref|XP_004148886.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Cucumis
           sativus] gi|449491514|ref|XP_004158922.1| PREDICTED: U1
           small nuclear ribonucleoprotein C-like [Cucumis sativus]
          Length = 197

 Score =  123 bits (309), Expect = 5e-26
 Identities = 60/85 (70%), Positives = 68/85 (80%), Gaps = 9/85 (10%)
 Frame = -1

Query: 797 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRNYYQQYEAQLNQSLIDQKVKEHLG- 621
           MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQ+E Q  QSLIDQ++KEHLG 
Sbjct: 1   MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60

Query: 620 --AFRPPVASY------ARPGMPVL 570
             AF+   A++       RP +PVL
Sbjct: 61  AAAFQQVGAAFNQHLLGQRPRLPVL 85


>gb|AFK36549.1| unknown [Lotus japonicus]
          Length = 192

 Score =  123 bits (309), Expect = 5e-26
 Identities = 60/84 (71%), Positives = 66/84 (78%), Gaps = 8/84 (9%)
 Frame = -1

Query: 797 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRNYYQQYEAQLNQSLIDQKVKEHLG- 621
           MPRYYCDYCDTYLTHDSPSVRKQHN+GYKHKANVRNYYQQ+E Q  QSLIDQ++KEHLG 
Sbjct: 1   MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRNYYQQFEEQQTQSLIDQRIKEHLGQ 60

Query: 620 --AFRPPVASY-----ARPGMPVL 570
             AF+    +Y      RPG P L
Sbjct: 61  AAAFQQVGVAYNHLMVPRPGGPPL 84


>gb|AFW65851.1| hypothetical protein ZEAMMB73_580988 [Zea mays]
          Length = 322

 Score =  123 bits (308), Expect = 7e-26
 Identities = 60/91 (65%), Positives = 68/91 (74%), Gaps = 13/91 (14%)
 Frame = -1

Query: 803 SAMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRNYYQQYEAQLNQSLIDQKVKEHL 624
           +AMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQ+E Q  QSLIDQ++KEHL
Sbjct: 192 AAMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHL 251

Query: 623 G---AFRPPV----------ASYARPGMPVL 570
           G   AF+              + ARP +P+L
Sbjct: 252 GQAAAFQAGAPFNQHLLAFPGAMARPRLPIL 282