BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00005500
         (1583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002872037.1| HCF136 [Arabidopsis lyrata subsp. lyrata] gi...   566   e-159
ref|XP_004135957.1| PREDICTED: photosystem II stability/assembly...   562   e-157
ref|XP_003540641.1| PREDICTED: photosystem II stability/assembly...   561   e-157
ref|XP_003607248.1| Photosystem II stability/assembly factor HCF...   557   e-156
ref|XP_002310654.1| predicted protein [Populus trichocarpa] gi|2...   556   e-156

>ref|XP_002872037.1| HCF136 [Arabidopsis lyrata subsp. lyrata] gi|297317874|gb|EFH48296.1|
            HCF136 [Arabidopsis lyrata subsp. lyrata]
          Length = 393

 Score =  566 bits (1458), Expect = e-159
 Identities = 281/369 (76%), Positives = 311/369 (84%), Gaps = 1/369 (0%)
 Frame = +2

Query: 185  PSASAARESQQPDYAITRRQLVGGLHAAAAISLSPLGS-KALAAEDPLSEWERVFLPIDP 361
            P ASA+  S     + +RR+L   L+ +AA+SLS +G  K   A++ LSEWERVFLPIDP
Sbjct: 28   PKASASPSSSSSSLSFSRREL---LYQSAAVSLSIVGPVKEAKADEQLSEWERVFLPIDP 84

Query: 362  GVVLLDIAFVPDDPSHGFLLGTRQTILETKDGGNTWLPRSIPSAEDEDFNYRFNSISFKG 541
            GVVLLDIAFVPD+PS GFLLGTRQT+LETKDGGNTW PRSIPSAE+EDFNYRFNSISFKG
Sbjct: 85   GVVLLDIAFVPDEPSRGFLLGTRQTLLETKDGGNTWNPRSIPSAEEEDFNYRFNSISFKG 144

Query: 542  NEGWIIGKPAILLYTADAGDTWKRIPLSSQLPGDMVYIKATGDKSAEMVTDQGAIYVTSN 721
             +GWIIGKPAILLYTADAGD W RIPLSSQLPGDMV+IKATGDKSAEMVTD+GAIYVTSN
Sbjct: 145  KQGWIIGKPAILLYTADAGDNWDRIPLSSQLPGDMVFIKATGDKSAEMVTDEGAIYVTSN 204

Query: 722  GGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFSTVNRSPDGKYVAVSSRGNFYLTWE 901
             GYNWKAA+QETVSATLNRTVSSGISGASYYTGTFS VNRSPDG+YVAVSSRGNF+LTWE
Sbjct: 205  KGYNWKAAIQETVSATLNRTVSSGISGASYYTGTFSAVNRSPDGRYVAVSSRGNFFLTWE 264

Query: 902  PGQAYWQPHNRAVGRRIQNMGWRSDXXXXXXXXXXXXXXSKGTGITEEFEEVPVQSRGFG 1081
            PGQ YWQPHNRAV RRIQNMGWR+D              SKGTG+TE+FEEVPVQSRGFG
Sbjct: 265  PGQPYWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLYLSKGTGLTEDFEEVPVQSRGFG 324

Query: 1082 ILDVGYRXXXXXXXXXXXXILLKSTNSGKSWIRDKAADNIAANLYSVKFINDKQGFVLGN 1261
            ILDVGYR            ILL++ N GKSW RDKAADNIAANLY+VKF++DK+GFVLGN
Sbjct: 325  ILDVGYRSEEEAWAAGGSGILLRTRNGGKSWNRDKAADNIAANLYAVKFVDDKKGFVLGN 384

Query: 1262 DGVLLKYLG 1288
            DGVLL+Y+G
Sbjct: 385  DGVLLRYVG 393


>ref|XP_004135957.1| PREDICTED: photosystem II stability/assembly factor HCF136,
            chloroplastic-like [Cucumis sativus]
            gi|449488796|ref|XP_004158174.1| PREDICTED: photosystem
            II stability/assembly factor HCF136, chloroplastic-like
            [Cucumis sativus]
          Length = 406

 Score =  562 bits (1448), Expect = e-157
 Identities = 276/356 (77%), Positives = 304/356 (85%), Gaps = 2/356 (0%)
 Frame = +2

Query: 227  AITRRQLVGGLHAAAAISLSPLGSKALAA--EDPLSEWERVFLPIDPGVVLLDIAFVPDD 400
            +I RR  V    AA ++SLSP  +    A  E+ LSEWER++LPIDPGVVLLDIAFVPDD
Sbjct: 51   SINRRHFVADTAAAVSLSLSPFIAPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDD 110

Query: 401  PSHGFLLGTRQTILETKDGGNTWLPRSIPSAEDEDFNYRFNSISFKGNEGWIIGKPAILL 580
             +HGFLLGTRQTILETKDGG TW PRSIPSAE+EDFNYRFNSISFKG EGWI+GKPAILL
Sbjct: 111  MNHGFLLGTRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILL 170

Query: 581  YTADAGDTWKRIPLSSQLPGDMVYIKATGDKSAEMVTDQGAIYVTSNGGYNWKAAVQETV 760
            YT+DAG++W+RIPLS+QLPGDMVYIKATG+KSAEMVTD+GAIYVTSN GYNWKAAVQETV
Sbjct: 171  YTSDAGESWERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETV 230

Query: 761  SATLNRTVSSGISGASYYTGTFSTVNRSPDGKYVAVSSRGNFYLTWEPGQAYWQPHNRAV 940
            SATLNRTVSSGISGASYYTGTF+TVNRSPDG+YVAVSSRGNFYLTWEPGQ +WQPHNRA+
Sbjct: 231  SATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAI 290

Query: 941  GRRIQNMGWRSDXXXXXXXXXXXXXXSKGTGITEEFEEVPVQSRGFGILDVGYRXXXXXX 1120
             RRIQNMGWR+D              SKGTGI+EEFEEVPVQSRGFGILDVGYR      
Sbjct: 291  ARRIQNMGWRADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKEEAW 350

Query: 1121 XXXXXXILLKSTNSGKSWIRDKAADNIAANLYSVKFINDKQGFVLGNDGVLLKYLG 1288
                  +LLK+TN G+SW RDKAADNIAANLYSVKFINDK+GFVLGNDGVLL+YLG
Sbjct: 351  AAGGSGVLLKTTNGGRSWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 406


>ref|XP_003540641.1| PREDICTED: photosystem II stability/assembly factor HCF136,
            chloroplastic-like [Glycine max]
          Length = 393

 Score =  561 bits (1447), Expect = e-157
 Identities = 275/360 (76%), Positives = 309/360 (85%)
 Frame = +2

Query: 209  SQQPDYAITRRQLVGGLHAAAAISLSPLGSKALAAEDPLSEWERVFLPIDPGVVLLDIAF 388
            S + D++ + R+      AA ++SL  L +++   ED LSEWERV+LPIDPGVVLLDIAF
Sbjct: 37   SSEDDFSRSSRRRFIAETAALSVSLPQLTARS---EDALSEWERVYLPIDPGVVLLDIAF 93

Query: 389  VPDDPSHGFLLGTRQTILETKDGGNTWLPRSIPSAEDEDFNYRFNSISFKGNEGWIIGKP 568
            VPDDP+HGFLLGTRQTILETKDGGNTW PRSIPSAEDEDFNYRFNSISFKG EGWI+GKP
Sbjct: 94   VPDDPNHGFLLGTRQTILETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKP 153

Query: 569  AILLYTADAGDTWKRIPLSSQLPGDMVYIKATGDKSAEMVTDQGAIYVTSNGGYNWKAAV 748
            +ILLYT+DAGD+W+RIPLS++LPGDMVYIKATG+KSAEMVTD+GAIYVT+N GYNW+AAV
Sbjct: 154  SILLYTSDAGDSWERIPLSAELPGDMVYIKATGEKSAEMVTDEGAIYVTANRGYNWRAAV 213

Query: 749  QETVSATLNRTVSSGISGASYYTGTFSTVNRSPDGKYVAVSSRGNFYLTWEPGQAYWQPH 928
            QETVSATLNRTVSSGISGASYYTGTF+TVNRSPDG+YVAVSSRGNFYLTWEPGQ +WQPH
Sbjct: 214  QETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPH 273

Query: 929  NRAVGRRIQNMGWRSDXXXXXXXXXXXXXXSKGTGITEEFEEVPVQSRGFGILDVGYRXX 1108
            NRAV RRIQNMGWR+D              SKG G+TEEFEEVPVQSRGFGILDVGYR  
Sbjct: 274  NRAVARRIQNMGWRADGGLWLLVRGGGLYLSKGKGLTEEFEEVPVQSRGFGILDVGYRST 333

Query: 1109 XXXXXXXXXXILLKSTNSGKSWIRDKAADNIAANLYSVKFINDKQGFVLGNDGVLLKYLG 1288
                      ILL++TN GKSWIRDKAADNIAANLYSVKFI++K+GFVLGNDGVLL+YLG
Sbjct: 334  DEAWAAGGSGILLRTTNGGKSWIRDKAADNIAANLYSVKFIDEKKGFVLGNDGVLLRYLG 393


>ref|XP_003607248.1| Photosystem II stability/assembly factor HCF136 [Medicago truncatula]
            gi|355508303|gb|AES89445.1| Photosystem II
            stability/assembly factor HCF136 [Medicago truncatula]
          Length = 396

 Score =  557 bits (1436), Expect = e-156
 Identities = 275/368 (74%), Positives = 306/368 (83%)
 Frame = +2

Query: 185  PSASAARESQQPDYAITRRQLVGGLHAAAAISLSPLGSKALAAEDPLSEWERVFLPIDPG 364
            P +   + S +P    TRRQ +    A + +    L S+   +E+ LSEWERV+LPIDPG
Sbjct: 35   PRSFVVKASLEPSR--TRRQFIAETTAISVL----LPSQLAKSEETLSEWERVYLPIDPG 88

Query: 365  VVLLDIAFVPDDPSHGFLLGTRQTILETKDGGNTWLPRSIPSAEDEDFNYRFNSISFKGN 544
            VVLLDIAFVP DP+HGFLLGTRQT+LETKDGG TW PRSIPSAEDEDFNYRFNSISFKG 
Sbjct: 89   VVLLDIAFVPQDPNHGFLLGTRQTLLETKDGGRTWAPRSIPSAEDEDFNYRFNSISFKGK 148

Query: 545  EGWIIGKPAILLYTADAGDTWKRIPLSSQLPGDMVYIKATGDKSAEMVTDQGAIYVTSNG 724
            EGWI+GKPAILLYT DAG++W+RIPLS++LPGDMVYIKAT +KSAEMVTD+GAIYVTSN 
Sbjct: 149  EGWIVGKPAILLYTPDAGESWERIPLSAELPGDMVYIKATNEKSAEMVTDEGAIYVTSNR 208

Query: 725  GYNWKAAVQETVSATLNRTVSSGISGASYYTGTFSTVNRSPDGKYVAVSSRGNFYLTWEP 904
            GYNWKAAVQE+VSATLNRTVSSGISGASYYTGTF+TVNRSPDG+YVAVSSRGNFY+TWEP
Sbjct: 209  GYNWKAAVQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYMTWEP 268

Query: 905  GQAYWQPHNRAVGRRIQNMGWRSDXXXXXXXXXXXXXXSKGTGITEEFEEVPVQSRGFGI 1084
            GQAYWQPHNRAV RRIQNMGWR+D              SKGTGITEEFEE+PVQSRGFGI
Sbjct: 269  GQAYWQPHNRAVARRIQNMGWRADGGLWLLVRGGSLFLSKGTGITEEFEEIPVQSRGFGI 328

Query: 1085 LDVGYRXXXXXXXXXXXXILLKSTNSGKSWIRDKAADNIAANLYSVKFINDKQGFVLGND 1264
            LDVGYR            ILL++ N GKSWIRDKAADNIAANLYSVKFI+DK+GFVLGND
Sbjct: 329  LDVGYRSTDEAWAAGGSGILLRTNNGGKSWIRDKAADNIAANLYSVKFIDDKKGFVLGND 388

Query: 1265 GVLLKYLG 1288
            GVLL+YLG
Sbjct: 389  GVLLRYLG 396


>ref|XP_002310654.1| predicted protein [Populus trichocarpa] gi|222853557|gb|EEE91104.1|
            predicted protein [Populus trichocarpa]
          Length = 394

 Score =  556 bits (1433), Expect = e-156
 Identities = 273/366 (74%), Positives = 311/366 (84%), Gaps = 4/366 (1%)
 Frame = +2

Query: 203  RESQQPD----YAITRRQLVGGLHAAAAISLSPLGSKALAAEDPLSEWERVFLPIDPGVV 370
            R SQ+P+    + I++   +  L   + + L+P  + A AAED LSEWERV+LPIDPGVV
Sbjct: 30   RLSQRPELNRRHFISQTASLSSLPLLSPLILNPQQANA-AAEDSLSEWERVYLPIDPGVV 88

Query: 371  LLDIAFVPDDPSHGFLLGTRQTILETKDGGNTWLPRSIPSAEDEDFNYRFNSISFKGNEG 550
            LLDIAFVPDD +HGFLLGTRQTI+ETKDGGNTW+ RSIPSAEDEDFNYRFNSISFKG EG
Sbjct: 89   LLDIAFVPDDTNHGFLLGTRQTIMETKDGGNTWVQRSIPSAEDEDFNYRFNSISFKGKEG 148

Query: 551  WIIGKPAILLYTADAGDTWKRIPLSSQLPGDMVYIKATGDKSAEMVTDQGAIYVTSNGGY 730
            WI+GKPAILLYTAD+G+TW+RIPLS+QLPGDMVYIKATG+KSAEMVTD+GAIY+TSN GY
Sbjct: 149  WIVGKPAILLYTADSGETWERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYITSNRGY 208

Query: 731  NWKAAVQETVSATLNRTVSSGISGASYYTGTFSTVNRSPDGKYVAVSSRGNFYLTWEPGQ 910
            NW+AAVQE+VSATLNRTVSSGISGASYYTGTF+TVNRSP+G YVAVSSRGNFYLTWEPGQ
Sbjct: 209  NWRAAVQESVSATLNRTVSSGISGASYYTGTFNTVNRSPNGNYVAVSSRGNFYLTWEPGQ 268

Query: 911  AYWQPHNRAVGRRIQNMGWRSDXXXXXXXXXXXXXXSKGTGITEEFEEVPVQSRGFGILD 1090
            A+WQPHNRA+ RRIQNMGWR+D              SKGTGI+EEFEE+PVQSRGFGILD
Sbjct: 269  AFWQPHNRAIARRIQNMGWRADGGLWLLVRGGGLYLSKGTGISEEFEEIPVQSRGFGILD 328

Query: 1091 VGYRXXXXXXXXXXXXILLKSTNSGKSWIRDKAADNIAANLYSVKFINDKQGFVLGNDGV 1270
            VGYR            +LL++TN GK+W RDKAADNIAANLYSVKFI+DK+GFVLGNDGV
Sbjct: 329  VGYRSKEEAWAAGGSGVLLRTTNGGKTWTRDKAADNIAANLYSVKFIDDKKGFVLGNDGV 388

Query: 1271 LLKYLG 1288
            LL+YLG
Sbjct: 389  LLRYLG 394