BLASTX nr result

ID: Scutellaria24_contig00005446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00005446
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529595.1| RNA binding motif protein, putative [Ricinus...    62   6e-08
ref|XP_003527533.1| PREDICTED: uncharacterized protein LOC100814...    60   1e-07
gb|AFK38875.1| unknown [Medicago truncatula]                           60   2e-07
ref|XP_002265627.1| PREDICTED: zinc finger CCHC-type and RNA-bin...    60   2e-07
ref|XP_002315325.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07

>ref|XP_002529595.1| RNA binding motif protein, putative [Ricinus communis]
           gi|223530928|gb|EEF32787.1| RNA binding motif protein,
           putative [Ricinus communis]
          Length = 217

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/32 (84%), Positives = 32/32 (100%)
 Frame = -2

Query: 96  TVYVSNIDYNLTNSDLHTIFSTFGKVAKVTVL 1
           TVYVSN+DY+LTNSDLHT+FSTFGK+A+VTVL
Sbjct: 52  TVYVSNLDYSLTNSDLHTLFSTFGKIARVTVL 83


>ref|XP_003527533.1| PREDICTED: uncharacterized protein LOC100814914 [Glycine max]
          Length = 273

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/32 (84%), Positives = 32/32 (100%)
 Frame = -2

Query: 96  TVYVSNIDYNLTNSDLHTIFSTFGKVAKVTVL 1
           T+YVSNIDY+LTNSDLHT+FSTFG+VA+VTVL
Sbjct: 64  TLYVSNIDYSLTNSDLHTLFSTFGRVARVTVL 95


>gb|AFK38875.1| unknown [Medicago truncatula]
          Length = 277

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 25/32 (78%), Positives = 32/32 (100%)
 Frame = -2

Query: 96  TVYVSNIDYNLTNSDLHTIFSTFGKVAKVTVL 1
           T+YVSN+DY+LTNSDLHT+FSTFG++A+VTVL
Sbjct: 69  TIYVSNLDYSLTNSDLHTLFSTFGRIARVTVL 100


>ref|XP_002265627.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
           protein 1 [Vitis vinifera] gi|147789032|emb|CAN75783.1|
           hypothetical protein VITISV_022491 [Vitis vinifera]
          Length = 250

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = -2

Query: 96  TVYVSNIDYNLTNSDLHTIFSTFGKVAKVTVL 1
           TVYVSN+DY LTNSDL TIFSTFGKVAKVT+L
Sbjct: 52  TVYVSNLDYTLTNSDLFTIFSTFGKVAKVTIL 83


>ref|XP_002315325.1| predicted protein [Populus trichocarpa] gi|222864365|gb|EEF01496.1|
           predicted protein [Populus trichocarpa]
          Length = 130

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/32 (81%), Positives = 32/32 (100%)
 Frame = -2

Query: 96  TVYVSNIDYNLTNSDLHTIFSTFGKVAKVTVL 1
           T+YVSN+D++LTNSDLHT+FSTFGKVA+VTVL
Sbjct: 10  TLYVSNLDFSLTNSDLHTLFSTFGKVARVTVL 41


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