BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00005321
         (943 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF06506.1| RNA polymerase [Elaeis guineensis]                     224   2e-56
dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa s...   217   4e-54
gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indi...   217   4e-54
ref|NP_001147399.1| LOC100281008 [Zea mays] gi|194699730|gb|ACF8...   211   2e-52
ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, I...   210   3e-52

>gb|ACF06506.1| RNA polymerase [Elaeis guineensis]
          Length = 145

 Score =  224 bits (572), Expect = 2e-56
 Identities = 110/145 (75%), Positives = 122/145 (84%)
 Frame = +2

Query: 224 MVETLFEDIFRIDALDPDGKKFDKVSRISARSEQFDMLMHLDVNTEIYPMHTGEKFMMVL 403
           MVE LFEDIF +  +DPDGKKFDKVSRI ARSEQFDM M LDVNTEIYP+H G+KF MVL
Sbjct: 1   MVELLFEDIFTLTRIDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLHVGDKFTMVL 60

Query: 404 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQVKADMYVSFGGLLM 583
           A TL+LDGTPDSGYY  G RKSLADKF+YVM GKLY+ISEE+    VK ++Y SFGGLLM
Sbjct: 61  APTLSLDGTPDSGYYMQGQRKSLADKFEYVMHGKLYKISEESSGPNVKVEIYASFGGLLM 120

Query: 584 MLKGDPSIAARFELDQRLFILIRKV 658
           MLKGDPS A  FELDQRLF+L+RKV
Sbjct: 121 MLKGDPSNATNFELDQRLFLLMRKV 145


>dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa subunit [Oryza
           sativa Japonica Group]
          Length = 396

 Score =  217 bits (552), Expect = 4e-54
 Identities = 108/147 (73%), Positives = 122/147 (82%), Gaps = 1/147 (0%)
 Frame = +2

Query: 221 KMVETLFEDIFRIDALDPDGKKFDKVSRISARSEQFDMLMHLDVNTEIYPMHTGEKFMMV 400
           KMVE LFEDIF +  LDPDGKKFD+VSRI ARSEQFDM M LDV TE+YPM  G++F MV
Sbjct: 250 KMVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMV 309

Query: 401 LASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQ-VKADMYVSFGGL 577
           LA TLNLDGTPD+G+YT   RK+LADKFDYVM GKLY+ISE++   Q  K ++Y SFGGL
Sbjct: 310 LAPTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGL 369

Query: 578 LMMLKGDPSIAARFELDQRLFILIRKV 658
           LMMLKGDPS AA FELDQRLF+LIRKV
Sbjct: 370 LMMLKGDPSSAASFELDQRLFLLIRKV 396


>gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indica Group]
           gi|125598367|gb|EAZ38147.1| hypothetical protein
           OsJ_22498 [Oryza sativa Japonica Group]
          Length = 191

 Score =  217 bits (552), Expect = 4e-54
 Identities = 108/147 (73%), Positives = 122/147 (82%), Gaps = 1/147 (0%)
 Frame = +2

Query: 221 KMVETLFEDIFRIDALDPDGKKFDKVSRISARSEQFDMLMHLDVNTEIYPMHTGEKFMMV 400
           KMVE LFEDIF +  LDPDGKKFD+VSRI ARSEQFDM M LDV TE+YPM  G++F MV
Sbjct: 45  KMVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMV 104

Query: 401 LASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQ-VKADMYVSFGGL 577
           LA TLNLDGTPD+G+YT   RK+LADKFDYVM GKLY+ISE++   Q  K ++Y SFGGL
Sbjct: 105 LAPTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGL 164

Query: 578 LMMLKGDPSIAARFELDQRLFILIRKV 658
           LMMLKGDPS AA FELDQRLF+LIRKV
Sbjct: 165 LMMLKGDPSSAASFELDQRLFLLIRKV 191


>ref|NP_001147399.1| LOC100281008 [Zea mays] gi|194699730|gb|ACF83949.1| unknown [Zea
           mays] gi|195607894|gb|ACG25777.1| DNA-directed RNA
           polymerases I, II, and III 17.1 kDa polypeptide [Zea
           mays] gi|195608506|gb|ACG26083.1| DNA-directed RNA
           polymerases I, II, and III 17.1 kDa polypeptide [Zea
           mays] gi|195611040|gb|ACG27350.1| DNA-directed RNA
           polymerases I, II, and III 17.1 kDa polypeptide [Zea
           mays] gi|195649823|gb|ACG44379.1| DNA-directed RNA
           polymerases I, II, and III 17.1 kDa polypeptide [Zea
           mays] gi|195653495|gb|ACG46215.1| DNA-directed RNA
           polymerases I, II, and III 17.1 kDa polypeptide [Zea
           mays] gi|238014148|gb|ACR38109.1| unknown [Zea mays]
           gi|413932441|gb|AFW66992.1| DNA-directed RNA polymerase
           I, II, and III polypeptide isoform 1 [Zea mays]
           gi|413932442|gb|AFW66993.1| DNA-directed RNA polymerase
           I, II, and III polypeptide isoform 2 [Zea mays]
           gi|413932443|gb|AFW66994.1| DNA-directed RNA polymerase
           I, II, and III polypeptide isoform 3 [Zea mays]
           gi|413932444|gb|AFW66995.1| DNA-directed RNA polymerase
           I, II, and III polypeptide isoform 4 [Zea mays]
          Length = 146

 Score =  211 bits (537), Expect = 2e-52
 Identities = 103/146 (70%), Positives = 119/146 (81%), Gaps = 1/146 (0%)
 Frame = +2

Query: 224 MVETLFEDIFRIDALDPDGKKFDKVSRISARSEQFDMLMHLDVNTEIYPMHTGEKFMMVL 403
           M E LFED F +  LDPDGKKFD+VSR+ ARSEQ DM M LDV T++YPMH GEKF MV+
Sbjct: 1   MSEHLFEDTFVVTRLDPDGKKFDRVSRVEARSEQLDMYMQLDVATDVYPMHAGEKFNMVI 60

Query: 404 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQ-VKADMYVSFGGLL 580
           A TLNLDGTPD+GYYT   RK+LAD ++YVMQGKLY+ISE+T   Q  K +MY SFGGLL
Sbjct: 61  APTLNLDGTPDTGYYTQAGRKTLADNYEYVMQGKLYKISEDTSSSQNAKVEMYASFGGLL 120

Query: 581 MMLKGDPSIAARFELDQRLFILIRKV 658
           M+L+GDPS AA FELDQRLF+LIRKV
Sbjct: 121 MLLRGDPSTAASFELDQRLFLLIRKV 146


>ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3 isoform 1 [Vitis vinifera]
           gi|359478220|ref|XP_003632088.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit rpabc3 isoform 2
           [Vitis vinifera] gi|296084252|emb|CBI24640.3| unnamed
           protein product [Vitis vinifera]
          Length = 145

 Score =  210 bits (535), Expect = 3e-52
 Identities = 104/145 (71%), Positives = 118/145 (81%)
 Frame = +2

Query: 224 MVETLFEDIFRIDALDPDGKKFDKVSRISARSEQFDMLMHLDVNTEIYPMHTGEKFMMVL 403
           M  TLF DIF++  +DPDGKKFDKVSRI A+SEQ DM M LDVNTEIYPMH GEKF M L
Sbjct: 1   MENTLFGDIFKVIQIDPDGKKFDKVSRIEAQSEQLDMYMQLDVNTEIYPMHAGEKFAMSL 60

Query: 404 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQVKADMYVSFGGLLM 583
           ASTL+LDGTPD+GYYT   RKSLADKF+YVM GKLY+ISEE     VK  +YVSFGGLLM
Sbjct: 61  ASTLDLDGTPDTGYYTQAGRKSLADKFEYVMHGKLYKISEEGSGPNVKGVIYVSFGGLLM 120

Query: 584 MLKGDPSIAARFELDQRLFILIRKV 658
           ML GDP+  A+ +LDQR+F+LIRKV
Sbjct: 121 MLSGDPANTAKLDLDQRVFLLIRKV 145