BLASTX nr result

ID: Scutellaria24_contig00005320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00005320
         (610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa s...    61   2e-07
gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indi...    61   2e-07
ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [S...    58   1e-06
ref|XP_002463525.1| hypothetical protein SORBIDRAFT_01g001420 [S...    58   1e-06
gb|ACG27451.1| DNA-directed RNA polymerases I, II, and III 17.1 ...    58   1e-06

>dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa subunit [Oryza
           sativa Japonica Group]
          Length = 396

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/36 (80%), Positives = 32/36 (88%)
 Frame = +2

Query: 275 DIYVSFGGLLMMLKGDPSVAARFELDYKLFILIRKV 382
           +IY SFGGLLMMLKGDPS AA FELD +LF+LIRKV
Sbjct: 361 EIYASFGGLLMMLKGDPSSAASFELDQRLFLLIRKV 396


>gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indica Group]
           gi|125598367|gb|EAZ38147.1| hypothetical protein
           OsJ_22498 [Oryza sativa Japonica Group]
          Length = 191

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/36 (80%), Positives = 32/36 (88%)
 Frame = +2

Query: 275 DIYVSFGGLLMMLKGDPSVAARFELDYKLFILIRKV 382
           +IY SFGGLLMMLKGDPS AA FELD +LF+LIRKV
Sbjct: 156 EIYASFGGLLMMLKGDPSSAASFELDQRLFLLIRKV 191


>ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [Sorghum bicolor]
           gi|241919960|gb|EER93104.1| hypothetical protein
           SORBIDRAFT_01g001330 [Sorghum bicolor]
          Length = 145

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/36 (72%), Positives = 32/36 (88%)
 Frame = +2

Query: 275 DIYVSFGGLLMMLKGDPSVAARFELDYKLFILIRKV 382
           +IY SFGGLLM+L+GDPS AA FELD +LF+L+RKV
Sbjct: 110 EIYASFGGLLMLLRGDPSTAASFELDQRLFLLMRKV 145


>ref|XP_002463525.1| hypothetical protein SORBIDRAFT_01g001420 [Sorghum bicolor]
           gi|241917379|gb|EER90523.1| hypothetical protein
           SORBIDRAFT_01g001420 [Sorghum bicolor]
          Length = 145

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/36 (72%), Positives = 32/36 (88%)
 Frame = +2

Query: 275 DIYVSFGGLLMMLKGDPSVAARFELDYKLFILIRKV 382
           +IY SFGGLLM+L+GDPS AA FELD +LF+L+RKV
Sbjct: 110 EIYASFGGLLMLLRGDPSTAASFELDQRLFLLMRKV 145


>gb|ACG27451.1| DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide
           [Zea mays]
          Length = 146

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/36 (72%), Positives = 32/36 (88%)
 Frame = +2

Query: 275 DIYVSFGGLLMMLKGDPSVAARFELDYKLFILIRKV 382
           ++Y SFGGLLM+L+GDPS AA FELD +LF+LIRKV
Sbjct: 111 EMYASFGGLLMLLRGDPSTAASFELDQRLFLLIRKV 146


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